RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 IDH3GP51553 393 aaPredicted RBP11.23□□□□□ -0.61
CHD1L-210ENST00000622533 VAMP2P63027 116 aa11.23□□□□□ -0.61
CHD1L-210ENST00000622533 OR8B8Q15620 311 aa11.23□□□□□ -0.61
CHD1L-210ENST00000622533 ASCL4Q6XD76 172 aa11.23□□□□□ -0.61
CHD1L-210ENST00000622533 PCGF1Q9BSM1 259 aa11.23□□□□□ -0.61
CHD1L-210ENST00000622533 TMEM242Q9NWH2 141 aa11.23□□□□□ -0.61
CHD1L-210ENST00000622533 RARRES3Q9UL19 164 aa11.23□□□□□ -0.61
CHD1L-210ENST00000622533 FUT9Q9Y231 359 aa11.23□□□□□ -0.61
CHD1L-210ENST00000622533 DCAF10Q5QP82 559 aa11.23□□□□□ -0.61
CHD1L-210ENST00000622533 SLC25A26Q70HW3 274 aa11.23□□□□□ -0.61
CHD1L-210ENST00000622533 MAML2Q8IZL2 1156 aaPredicted RBP11.23□□□□□ -0.61
CHD1L-210ENST00000622533 PRR18Q8N4B5 295 aa11.23□□□□□ -0.61
CHD1L-210ENST00000622533 RBM24Q9BX46 236 aaKnown RBP11.23□□□□□ -0.61
CHD1L-210ENST00000622533 C11orf1Q9H5F2 150 aa11.23□□□□□ -0.61
CHD1L-210ENST00000622533 VSIRQ9H7M9 311 aa11.23□□□□□ -0.61
CHD1L-210ENST00000622533 POLR3KQ9Y2Y1 108 aaPredicted RBP11.23□□□□□ -0.61
CHD1L-210ENST00000622533 SRFP11831 508 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 MRPS34P82930 218 aaKnown RBP11.22□□□□□ -0.61
CHD1L-210ENST00000622533 RTP5Q14D33 572 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 PDCD1Q15116 288 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 BATFQ16520 125 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 IQCJQ1A5X6 159 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 RSPO1Q2MKA7 263 aaPredicted RBP11.22□□□□□ -0.61
CHD1L-210ENST00000622533 FAM27BQ5VT28 67 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 SLC25A45Q8N413 288 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 OR6C1Q96RD1 312 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 DIRC2Q96SL1 478 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 CHCHD2Q9Y6H1 151 aaPredicted RBP11.22□□□□□ -0.61
CHD1L-210ENST00000622533 A0A1B0GUS0 222 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 ZNF732B4DXR9 585 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 H3BP45 60 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 OR3A1P47881 315 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 PRSS12P56730 875 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 PNRC1Q12796 327 aaPredicted RBP11.22□□□□□ -0.61
CHD1L-210ENST00000622533 ZNF774Q6NX45 483 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 MOB3AQ96BX8 217 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 BORCS8Q96FH0 119 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 ULBP2Q9BZM5 246 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 IL36GQ9NZH8 169 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 VAX2Q9UIW0 290 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 A0A1W2PPQ1 181 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 CEBPZOSA8MTT3 80 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 SPRY1O43609 319 aaPredicted RBP11.22□□□□□ -0.61
CHD1L-210ENST00000622533 CNOT4O95628 575 aaKnown RBP11.22□□□□□ -0.61
CHD1L-210ENST00000622533 CDS2O95674 445 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 HBE1P02100 147 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 RPLP1P05386 114 aaKnown RBP11.22□□□□□ -0.61
CHD1L-210ENST00000622533 CST2P09228 141 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 BCL2P10415 239 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 CD33P20138 364 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 HERV-K104P61576 105 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 ARSJQ5FYB0 599 aaPredicted RBP11.22□□□□□ -0.61
CHD1L-210ENST00000622533 SSX7Q7RTT5 188 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 TMEM18Q96B42 140 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 GNPNAT1Q96EK6 184 aaPredicted RBP11.22□□□□□ -0.61
CHD1L-210ENST00000622533 ABHD14BQ96IU4 210 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 RSG1Q9BU20 258 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 RIMS4Q9H426 269 aaPredicted RBP11.22□□□□□ -0.61
CHD1L-210ENST00000622533 LYRM2Q9NU23 88 aaPredicted RBP11.22□□□□□ -0.61
CHD1L-210ENST00000622533 PLA2G3Q9NZ20 509 aa11.22□□□□□ -0.61
CHD1L-210ENST00000622533 PPP5D1E7EU14 171 aa11.21□□□□□ -0.61
CHD1L-210ENST00000622533 ADAM20O43506 726 aa11.21□□□□□ -0.61
CHD1L-210ENST00000622533 PFN1P07737 140 aaKnown RBP11.21□□□□□ -0.61
CHD1L-210ENST00000622533 IRF2P14316 349 aa11.21□□□□□ -0.61
CHD1L-210ENST00000622533 GNG10P50151 68 aa11.21□□□□□ -0.61
CHD1L-210ENST00000622533 ANKRD39Q53RE8 183 aa11.21□□□□□ -0.61
CHD1L-210ENST00000622533 PHYHD1Q5SRE7 291 aa11.21□□□□□ -0.61
CHD1L-210ENST00000622533 ZNF787Q6DD87 383 aa11.21□□□□□ -0.61
CHD1L-210ENST00000622533 SLC25A24Q6NUK1 477 aa11.21□□□□□ -0.61
CHD1L-210ENST00000622533 TECTBQ96PL2 329 aa11.21□□□□□ -0.61
CHD1L-210ENST00000622533 SPIN2AQ99865 258 aa11.21□□□□□ -0.61
CHD1L-210ENST00000622533 SPIN2BQ9BPZ2 258 aa11.21□□□□□ -0.61
CHD1L-210ENST00000622533 FKBP11Q9NYL4 201 aa11.21□□□□□ -0.61
CHD1L-210ENST00000622533 NCOA6Q14686 2063 aaPredicted RBP11.21□□□□□ -0.62
CHD1L-210ENST00000622533 SELEP16581 610 aa11.21□□□□□ -0.62
CHD1L-210ENST00000622533 CRYGSP22914 178 aa11.21□□□□□ -0.62
CHD1L-210ENST00000622533 DSCR4P56555 118 aaPredicted RBP11.21□□□□□ -0.62
CHD1L-210ENST00000622533 TRA2AQ13595 282 aaKnown RBP eCLIP11.21□□□□□ -0.621e-7■■■□□ 17
CHD1L-210ENST00000622533 OSR2Q8N2R0 312 aa11.21□□□□□ -0.62
CHD1L-210ENST00000622533 RPRMQ9NS64 109 aa11.21□□□□□ -0.62
CHD1L-210ENST00000622533 P4HTMQ9NXG6 502 aa11.21□□□□□ -0.62
CHD1L-210ENST00000622533 MRPS18CQ9Y3D5 142 aaKnown RBP11.21□□□□□ -0.62
CHD1L-210ENST00000622533 PTRH2Q9Y3E5 179 aaKnown RBP11.21□□□□□ -0.62
CHD1L-210ENST00000622533 UNC13CQ8NB66 2214 aa11.2□□□□□ -0.62
CHD1L-210ENST00000622533 ZNF705FA8MVS1 300 aaPredicted RBP11.2□□□□□ -0.62
CHD1L-210ENST00000622533 GALR2O43603 387 aaPredicted RBP11.2□□□□□ -0.62
CHD1L-210ENST00000622533 METTL15P1P0C7V9 234 aa11.2□□□□□ -0.62
CHD1L-210ENST00000622533 ZNF705DP0CH99 300 aaPredicted RBP11.2□□□□□ -0.62
CHD1L-210ENST00000622533 ZNF705BP0CI00 300 aaPredicted RBP11.2□□□□□ -0.62
CHD1L-210ENST00000622533 MRPS11P82912 194 aaKnown RBP11.2□□□□□ -0.62
CHD1L-210ENST00000622533 SNAI3Q3KNW1 292 aa11.2□□□□□ -0.62
CHD1L-210ENST00000622533 COA6Q5JTJ3 125 aaKnown RBP11.2□□□□□ -0.62
CHD1L-210ENST00000622533 C1orf194Q5T5A4 169 aa11.2□□□□□ -0.62
CHD1L-210ENST00000622533 TMEM211Q6ICI0 200 aa11.2□□□□□ -0.62
CHD1L-210ENST00000622533 ZNF100Q8IYN0 542 aa11.2□□□□□ -0.62
CHD1L-210ENST00000622533 IL22RA1Q8N6P7 574 aa11.2□□□□□ -0.62
CHD1L-210ENST00000622533 NAT6Q93015 286 aa11.2□□□□□ -0.62
CHD1L-210ENST00000622533 ZNF385AQ96PM9 386 aaKnown RBP11.2□□□□□ -0.62
CHD1L-210ENST00000622533 CISD1Q9NZ45 108 aaKnown RBP11.2□□□□□ -0.62
CHD1L-210ENST00000622533 LOC400499M0QZD8 3231 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms