RNA–Protein interactions for RNA: ENST00000622362.1

FAM200B-223, Transcript of family with sequence similarity 200 member B, human

APPRIS P1 TSL 1 (best) BASIC

Gene FAM200B, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM200B-223	ENST00000622362	CCL2	P13500	99 aa		10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	CD82	P27701	267 aa		10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	WIPI1	Q5MNZ9	446 aa	Predicted RBP	10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	HDHD3	Q9BSH5	251 aa	Predicted RBP	10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	AAMDC	Q9H7C9	122 aa		10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	GSN-AS1	Q9NRJ2	163 aa		10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	MRPS18B	Q9Y676	258 aa	Known RBP	10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	TRAV39	A0A0B4J263	110 aa		10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	HOXA6	P31267	233 aa		10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	SCGB1D4	Q6XE38	83 aa		10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	OR2V1	Q8NHB1	315 aa		10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	PHOSPHO2	Q8TCD6	241 aa		10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	TMEM204	Q9BSN7	226 aa		10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	MAP1LC3C	Q9BXW4	147 aa		10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	IL36G	Q9NZH8	169 aa		10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	TDRD15	B5MCY1	1934 aa	Known RBP	10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	RBP4	P02753	201 aa		10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	GAPDH	P04406	335 aa	Known RBP	10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	RNF224	P0DH78	156 aa		10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	MYOG	P15173	224 aa		10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	CD40	P25942	277 aa		10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	MFAP2	P55001	183 aa		10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	TMEM252	Q8N6L7	170 aa		10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	SLC25A38	Q96DW6	304 aa		10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	RSG1	Q9BU20	258 aa		10.3	□□□□□ -0.76
FAM200B-223	ENST00000622362	TRGV10	A0A0A0MS01	117 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	CENPVL1	A0A0U1RR11	272 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	C5orf52	A6NGY3	159 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	CYB5R3	P00387	301 aa	Predicted RBP	10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	GCG	P01275	180 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	PPP1CC	P36873	323 aa	Known RBP	10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	CD200R1L	Q6Q8B3	271 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	OR1P1	Q8NH06	330 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	ZPLD1	Q8TCW7	415 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	MRGPRD	Q8TDS7	321 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	FBLIM1	Q8WUP2	373 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	ADAT3	Q96EY9	351 aa	Predicted RBP	10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	IP6K3	Q96PC2	410 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	SLC26A1	Q9H2B4	701 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	STARD10	Q9Y365	291 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	TGIF2-C20orf24	A0A0A6YYL0	155 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	CTXND1	A0A1B0GTU2	59 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362		A0A1W2PP11	408 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	HELT	A6NFD8	242 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	GAGE10	A6NGK3	116 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	LRRC3C	A6NJW4	275 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	CORT	O00230	105 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	WDR74	Q6RFH5	385 aa	Predicted RBP	10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	RABEPK	Q7Z6M1	372 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	ABHD3	Q8WU67	409 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	TMEM56	Q96MV1	263 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	ZNF391	Q9UJN7	358 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	CYC1	P08574	325 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	BCL3	P20749	454 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	GNG10	P50151	68 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	SRSF5	Q13243	272 aa	Known RBP	10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	ALKBH6	Q3KRA9	238 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	H1FOO	Q8IZA3	346 aa	Predicted RBP	10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	MMP17	Q9ULZ9	603 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	BRCA2	P51587	3418 aa		10.29	□□□□□ -0.76
FAM200B-223	ENST00000622362	RHBDL1	O75783	438 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	TRGC1	P0CF51	173 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	FCAR	P24071	287 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	COL8A1	P27658	744 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362		Q8IYB0	196 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	D2HGDH	Q8N465	521 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	MISP3	Q96FF7	219 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	TMEM167B	Q9NRX6	74 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	MPTX1	A8MV57	137 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	GCM2	O75603	506 aa	Predicted RBP	10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	FHIT	P49789	147 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	ZNF137P	P52743	207 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	ATG4D	Q86TL0	474 aa	Predicted RBP	10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	OR1L3	Q8NH93	324 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	GPX7	Q96SL4	187 aa	Predicted RBP	10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	FAM60A	Q9NP50	221 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	SMIM17	P0DL12	118 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	ZFP36L2	P47974	494 aa	Known RBP	10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	PSMB2	P49721	201 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	RPS23	P62266	143 aa	Known RBP	10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	LAMTOR1	Q6IAA8	161 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	SLC35E4	Q6ICL7	350 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	FBXO46	Q6PJ61	603 aa	Predicted RBP	10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	PET117	Q6UWS5	81 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	REC114	Q7Z4M0	266 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	OR8A1	Q8NGG7	326 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	KCNE4	Q8WWG9	221 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	SMIM12	Q96EX1	92 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	SCN10A	Q9Y5Y9	1956 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	OR5B21	A6NL26	309 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	NPIPB8	E9PQR5	432 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	SNRPC	P09234	159 aa	Known RBP	10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	PNLIP	P16233	465 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	MEF2B	Q02080	365 aa	Predicted RBP	10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	COL19A1	Q14993	1142 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	APCDD1L	Q8NCL9	501 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	ATG101	Q9BSB4	218 aa		10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	SF3B6	Q9Y3B4	125 aa	Known RBP	10.28	□□□□□ -0.76
FAM200B-223	ENST00000622362	PQLC2L	A1A4F0	135 aa		10.27	□□□□□ -0.76
FAM200B-223	ENST00000622362	MNX1	P50219	401 aa	Predicted RBP	10.27	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms