RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 FAM168AQ92567 244 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 FAM90A10PA6NDY2 464 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 FAM90A18PA6NE21 464 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 FAM90A16PA6NEW6 464 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 FAM90A20PA6NIJ5 464 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 FAM90A8PA6NJQ4 464 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 FAM90A7PA6NKC0 464 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 FAM90A22PA8MWA6 464 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 FAM90A12PA8MX19 464 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 FAM90A5PA8MXJ8 464 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 FAM90A23PA8MXZ1 464 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 FAM90A15PP0C7V4 464 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 FAM90A13PP0C7W8 464 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 FAM90A14PP0C7W9 464 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 FAM90A24PP0C7X0 464 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 SPNP16150 400 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 DTYMKP23919 212 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 ECI1P42126 302 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 ARF6P62330 175 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 HLA-DRB3P79483 266 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 GNMTQ14749 295 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 ZNF554Q86TJ5 538 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 NRIP2Q9BQI9 281 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 DCTN5Q9BTE1 182 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 OR2D2Q9H210 308 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 OCEL1Q9H607 264 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 RDH8Q9NYR8 311 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 MPPED1O15442 326 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 GSTZ1O43708 216 aaPredicted RBP10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 SNAPC5O75971 98 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 SIX6O95475 246 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 ARHGDIBP52566 201 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 ZP1P60852 638 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 Q3ZCU0 254 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 ZNF787Q6DD87 383 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 FAHD2BQ6P2I3 314 aaPredicted RBP10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 TRAT1Q6PIZ9 186 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 HOGA1Q86XE5 327 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 FAHD2AQ96GK7 314 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 HSF4Q9ULV5 492 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 CCSO14618 274 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 NXPH3O95157 252 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 SELLP14151 372 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 NKX6-1P78426 367 aaPredicted RBP10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 MOB3BQ86TA1 216 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 OR52B4Q8NGK2 314 aa10.54□□□□□ -0.72
SCAMP1-207ENST00000621999 IFNA17P01571 189 aa10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 HBZP02008 142 aa10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 AADACP22760 399 aa10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 IFITM3Q01628 133 aa10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 OR52L2PQ8NGH6 319 aa10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 OR1L1Q8NH94 360 aa10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 BBC3Q96PG8 261 aaPredicted RBP10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 ABCA1O95477 2261 aa10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 MFNGO00587 321 aa10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 PLA2G10O15496 165 aa10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 IFNA2P01563 188 aa10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 APOA2P02652 100 aa10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 OXA1LQ15070 435 aa10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 DMRTC2Q8IXT2 367 aaPredicted RBP10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 DRAXINQ8NBI3 349 aaPredicted RBP10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 MIOXQ9UGB7 285 aa10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 NUP50Q9UKX7 468 aa10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 C3orf36Q3SXR2 165 aa10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 GCSAMQ8N6F7 178 aa10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 RNF166Q96A37 237 aaPredicted RBP10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 NEIL1Q96FI4 390 aaPredicted RBP10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 ZNF75AQ96N20 296 aa10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 ZNF714Q96N38 554 aa10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 SPIN2AQ99865 258 aa10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 SPIN2BQ9BPZ2 258 aa10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 BARX1Q9HBU1 254 aaPredicted RBP10.53□□□□□ -0.72
SCAMP1-207ENST00000621999 OR4E1P0C645 316 aa10.52□□□□□ -0.72
SCAMP1-207ENST00000621999 COL8A2P25067 703 aa10.52□□□□□ -0.72
SCAMP1-207ENST00000621999 ZNF561Q8N587 486 aa10.52□□□□□ -0.72
SCAMP1-207ENST00000621999 ZBTB8BQ8NAP8 495 aaPredicted RBP10.52□□□□□ -0.72
SCAMP1-207ENST00000621999 LEAP2Q969E1 77 aa10.52□□□□□ -0.72
SCAMP1-207ENST00000621999 DCAF16Q9NXF7 216 aa10.52□□□□□ -0.72
SCAMP1-207ENST00000621999 IL36GQ9NZH8 169 aa10.52□□□□□ -0.72
SCAMP1-207ENST00000621999 FRYQ5TBA9 3013 aa10.52□□□□□ -0.72
SCAMP1-207ENST00000621999 SHISA9B4DS77 424 aa10.52□□□□□ -0.73
SCAMP1-207ENST00000621999 SSTR5P35346 364 aa10.52□□□□□ -0.73
SCAMP1-207ENST00000621999 SUCNR1Q9BXA5 334 aa10.52□□□□□ -0.73
SCAMP1-207ENST00000621999 CHODLQ9H9P2 273 aa10.52□□□□□ -0.73
SCAMP1-207ENST00000621999 GPR31O00270 319 aa10.52□□□□□ -0.73
SCAMP1-207ENST00000621999 DVL1O14640 695 aa10.52□□□□□ -0.73
SCAMP1-207ENST00000621999 PPYP01298 95 aa10.52□□□□□ -0.73
SCAMP1-207ENST00000621999 ZNF816Q0VGE8 651 aaPredicted RBP10.52□□□□□ -0.73
SCAMP1-207ENST00000621999 FAM90A1Q86YD7 464 aa10.52□□□□□ -0.73
SCAMP1-207ENST00000621999 LGI3Q8N145 548 aa10.52□□□□□ -0.73
SCAMP1-207ENST00000621999 OR13C8Q8NGS7 320 aa10.52□□□□□ -0.73
SCAMP1-207ENST00000621999 RPEQ96AT9 228 aa10.52□□□□□ -0.73
SCAMP1-207ENST00000621999 TM2D1Q9BX74 207 aa10.52□□□□□ -0.73
SCAMP1-207ENST00000621999 SIRT7Q9NRC8 400 aa10.52□□□□□ -0.73
SCAMP1-207ENST00000621999 PPIAL4CA0A0B4J2A2 164 aa10.52□□□□□ -0.73
SCAMP1-207ENST00000621999 SRRM5B3KS81 715 aa10.52□□□□□ -0.73
SCAMP1-207ENST00000621999 ST8SIA5O15466 376 aa10.52□□□□□ -0.73
SCAMP1-207ENST00000621999 PPIAL4GP0DN37 164 aa10.52□□□□□ -0.73
SCAMP1-207ENST00000621999 EGR1P18146 543 aa10.52□□□□□ -0.73
SCAMP1-207ENST00000621999 AGAP20933 346 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms