RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 ARL11Q969Q4 196 aa16.36■□□□□ 0.21
SMC6-210ENST00000621152 OR4F4Q96R69 305 aa16.36■□□□□ 0.21
SMC6-210ENST00000621152 MRPS28Q9Y2Q9 187 aaKnown RBP16.36■□□□□ 0.21
SMC6-210ENST00000621152 FAM90A18PA6NE21 464 aa16.35■□□□□ 0.21
SMC6-210ENST00000621152 FAM90A16PA6NEW6 464 aa16.35■□□□□ 0.21
SMC6-210ENST00000621152 FAM90A20PA6NIJ5 464 aa16.35■□□□□ 0.21
SMC6-210ENST00000621152 FAM90A9PA6NNJ1 464 aa16.35■□□□□ 0.21
SMC6-210ENST00000621152 FAM90A12PA8MX19 464 aa16.35■□□□□ 0.21
SMC6-210ENST00000621152 FAM90A5PA8MXJ8 464 aa16.35■□□□□ 0.21
SMC6-210ENST00000621152 MYL12BO14950 172 aa16.35■□□□□ 0.21
SMC6-210ENST00000621152 MT-ND4P03905 459 aa16.35■□□□□ 0.21
SMC6-210ENST00000621152 FAM90A15PP0C7V4 464 aa16.35■□□□□ 0.21
SMC6-210ENST00000621152 FAM90A13PP0C7W8 464 aa16.35■□□□□ 0.21
SMC6-210ENST00000621152 FAM90A14PP0C7W9 464 aa16.35■□□□□ 0.21
SMC6-210ENST00000621152 FAM90A24PP0C7X0 464 aa16.35■□□□□ 0.21
SMC6-210ENST00000621152 WNT4P56705 351 aa16.35■□□□□ 0.21
SMC6-210ENST00000621152 CD83Q01151 205 aa16.35■□□□□ 0.21
SMC6-210ENST00000621152 DRAM1Q8N682 238 aa16.35■□□□□ 0.21
SMC6-210ENST00000621152 NANOGP1Q8N7R0 232 aa16.35■□□□□ 0.21
SMC6-210ENST00000621152 OR10X1Q8NGY0 326 aa16.35■□□□□ 0.21
SMC6-210ENST00000621152 OR56B4Q8NH76 319 aa16.35■□□□□ 0.21
SMC6-210ENST00000621152 FBLIM1Q8WUP2 373 aa16.35■□□□□ 0.21
SMC6-210ENST00000621152 A0A1W2PRX2 142 aa16.34■□□□□ 0.21
SMC6-210ENST00000621152 MCRIP1C9JLW8 97 aa16.34■□□□□ 0.21
SMC6-210ENST00000621152 PIN1P1O15428 100 aa16.34■□□□□ 0.21
SMC6-210ENST00000621152 SNRNP70P08621 437 aaKnown RBP16.34■□□□□ 0.21
SMC6-210ENST00000621152 FSTP19883 344 aa16.34■□□□□ 0.21
SMC6-210ENST00000621152 HNF4GQ14541 408 aa16.34■□□□□ 0.21
SMC6-210ENST00000621152 CDH26Q8IXH8 852 aa16.34■□□□□ 0.21
SMC6-210ENST00000621152 UBALD1Q8TB05 177 aa16.34■□□□□ 0.21
SMC6-210ENST00000621152 DERL3Q96Q80 235 aa16.34■□□□□ 0.21
SMC6-210ENST00000621152 ERGIC3Q9Y282 383 aa16.34■□□□□ 0.21
SMC6-210ENST00000621152 TCRBV4S1A1TA0A5B7 111 aa16.33■□□□□ 0.2
SMC6-210ENST00000621152 C15orf65H3BRN8 121 aa16.33■□□□□ 0.2
SMC6-210ENST00000621152 M0QZK8 103 aa16.33■□□□□ 0.2
SMC6-210ENST00000621152 CD1AP06126 327 aa16.33■□□□□ 0.2
SMC6-210ENST00000621152 RAB7AP51149 207 aa16.33■□□□□ 0.2
SMC6-210ENST00000621152 DOC2BQ14184 412 aa16.33■□□□□ 0.2
SMC6-210ENST00000621152 HES1Q14469 280 aa16.33■□□□□ 0.2
SMC6-210ENST00000621152 BEAN1Q3B7T3 259 aa16.33■□□□□ 0.2
SMC6-210ENST00000621152 SAMD5Q5TGI4 173 aa16.33■□□□□ 0.2
SMC6-210ENST00000621152 AWAT2Q6E213 333 aa16.33■□□□□ 0.2
SMC6-210ENST00000621152 TFAP2CQ92754 450 aa16.33■□□□□ 0.2
SMC6-210ENST00000621152 MRPS24Q96EL2 167 aaKnown RBP16.33■□□□□ 0.2
SMC6-210ENST00000621152 VCXQ9H320 206 aa16.33■□□□□ 0.2
SMC6-210ENST00000621152 BANF2Q9H503 90 aa16.33■□□□□ 0.2
SMC6-210ENST00000621152 SPACA1Q9HBV2 294 aa16.33■□□□□ 0.2
SMC6-210ENST00000621152 A0A1W2PPI3 338 aa16.32■□□□□ 0.2
SMC6-210ENST00000621152 PTGES3LE9PB15 166 aa16.32■□□□□ 0.2
SMC6-210ENST00000621152 SDCBPO00560 298 aaPredicted RBP16.32■□□□□ 0.2
SMC6-210ENST00000621152 ORC5O43913 435 aa16.32■□□□□ 0.2
SMC6-210ENST00000621152 OXLD1Q5BKU9 147 aa16.32■□□□□ 0.2
SMC6-210ENST00000621152 TCTEX1D4Q5JR98 221 aa16.32■□□□□ 0.2
SMC6-210ENST00000621152 ZNF497Q6ZNH5 498 aa16.32■□□□□ 0.2
SMC6-210ENST00000621152 OR8H3Q8N146 312 aa16.32■□□□□ 0.2
SMC6-210ENST00000621152 OR52M1Q8NGK5 317 aa16.32■□□□□ 0.2
SMC6-210ENST00000621152 SELENOIQ9C0D9 397 aa16.32■□□□□ 0.2
SMC6-210ENST00000621152 FKBP14Q9NWM8 211 aa16.32■□□□□ 0.2
SMC6-210ENST00000621152 MOB4Q9Y3A3 225 aa16.32■□□□□ 0.2
SMC6-210ENST00000621152 PEX16Q9Y5Y5 336 aa16.32■□□□□ 0.2
SMC6-210ENST00000621152 AIPO00170 330 aa16.31■□□□□ 0.2
SMC6-210ENST00000621152 GAPDHP04406 335 aaKnown RBP16.31■□□□□ 0.2
SMC6-210ENST00000621152 TMEM11P17152 192 aa16.31■□□□□ 0.2
SMC6-210ENST00000621152 SYT6Q5T7P8 510 aaPredicted RBP16.31■□□□□ 0.2
SMC6-210ENST00000621152 RAB12Q6IQ22 244 aa16.31■□□□□ 0.2
SMC6-210ENST00000621152 FAM53AQ6NSI3 398 aaPredicted RBP16.31■□□□□ 0.2
SMC6-210ENST00000621152 MOB3BQ86TA1 216 aa16.31■□□□□ 0.2
SMC6-210ENST00000621152 DCLRE1BQ9H816 532 aa16.31■□□□□ 0.2
SMC6-210ENST00000621152 ETAA1Q9NY74 926 aa16.31■□□□□ 0.2
SMC6-210ENST00000621152 TRAPPC2LQ9UL33 140 aa16.31■□□□□ 0.2
SMC6-210ENST00000621152 IGHV3-43A0A0B4J1X8 118 aa16.3■□□□□ 0.2
SMC6-210ENST00000621152 CRTAPO75718 401 aaPredicted RBP16.3■□□□□ 0.2
SMC6-210ENST00000621152 CDK1P06493 297 aa16.3■□□□□ 0.2
SMC6-210ENST00000621152 IGHV3-43DP0DP04 118 aa16.3■□□□□ 0.2
SMC6-210ENST00000621152 VHLP40337 213 aa16.3■□□□□ 0.2
SMC6-210ENST00000621152 LOXL3P58215 753 aa16.3■□□□□ 0.2
SMC6-210ENST00000621152 ACSM3Q53FZ2 586 aa16.3■□□□□ 0.2
SMC6-210ENST00000621152 C6orf141Q5SZD1 244 aa16.3■□□□□ 0.2
SMC6-210ENST00000621152 C10orf99Q6UWK7 81 aa16.3■□□□□ 0.2
SMC6-210ENST00000621152 LYPD6Q86Y78 171 aa16.3■□□□□ 0.2
SMC6-210ENST00000621152 TMEM104Q8NE00 496 aa16.3■□□□□ 0.2
SMC6-210ENST00000621152 OR4K15Q8NH41 348 aa16.3■□□□□ 0.2
SMC6-210ENST00000621152 GFOD1Q9NXC2 390 aa16.3■□□□□ 0.2
SMC6-210ENST00000621152 RCC2Q9P258 522 aaKnown RBP16.3■□□□□ 0.2
SMC6-210ENST00000621152 NKX1-2Q9UD57 310 aaPredicted RBP16.3■□□□□ 0.2
SMC6-210ENST00000621152 NOTCH1P46531 2555 aa16.29■□□□□ 0.2
SMC6-210ENST00000621152 CCRL2O00421 344 aa16.29■□□□□ 0.2
SMC6-210ENST00000621152 IGKV1D-33P01593 117 aa16.29■□□□□ 0.2
SMC6-210ENST00000621152 IGKV1-33P01594 117 aa16.29■□□□□ 0.2
SMC6-210ENST00000621152 PRB2P02812 416 aaPredicted RBP16.29■□□□□ 0.2
SMC6-210ENST00000621152 MGMTP16455 207 aa16.29■□□□□ 0.2
SMC6-210ENST00000621152 MAPK3P27361 379 aaPredicted RBP16.29■□□□□ 0.2
SMC6-210ENST00000621152 REG1BP48304 166 aa16.29■□□□□ 0.2
SMC6-210ENST00000621152 ZNF816Q0VGE8 651 aaPredicted RBP16.29■□□□□ 0.2
SMC6-210ENST00000621152 KPRPQ5T749 579 aaPredicted RBP16.29■□□□□ 0.2
SMC6-210ENST00000621152 UNQ9370/PRO34162Q6UXP9 181 aa16.29■□□□□ 0.2
SMC6-210ENST00000621152 LINC00311Q8N616 119 aa16.29■□□□□ 0.2
SMC6-210ENST00000621152 OR4X2Q8NGF9 303 aa16.29■□□□□ 0.2
SMC6-210ENST00000621152 THRSPQ92748 146 aa16.29■□□□□ 0.2
SMC6-210ENST00000621152 MYDGFQ969H8 173 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms