RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 FAM185AQ8N0U4 392 aa14.09□□□□□ -0.15
TRAPPC3-210ENST00000617904 GCSAMQ8N6F7 178 aa14.09□□□□□ -0.15
TRAPPC3-210ENST00000617904 TMEM185AQ8NFB2 350 aa14.09□□□□□ -0.15
TRAPPC3-210ENST00000617904 DYRK2Q92630 601 aa14.09□□□□□ -0.15
TRAPPC3-210ENST00000617904 NINJ1Q92982 152 aa14.09□□□□□ -0.15
TRAPPC3-210ENST00000617904 ZNF486Q96H40 463 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC3-210ENST00000617904 VRK1Q99986 396 aaPredicted RBP14.09□□□□□ -0.15
TRAPPC3-210ENST00000617904 DNTTIP1Q9H147 329 aa14.09□□□□□ -0.15
TRAPPC3-210ENST00000617904 LIME1Q9H400 295 aa14.09□□□□□ -0.15
TRAPPC3-210ENST00000617904 ZNF665Q9H7R5 613 aa14.09□□□□□ -0.15
TRAPPC3-210ENST00000617904 GPR132Q9UNW8 380 aa14.09□□□□□ -0.15
TRAPPC3-210ENST00000617904 AKAP6Q13023 2319 aa14.08□□□□□ -0.16
TRAPPC3-210ENST00000617904 HSPA12AO43301 675 aa14.08□□□□□ -0.16
TRAPPC3-210ENST00000617904 HLA-AP01891 365 aaKnown RBP14.08□□□□□ -0.16
TRAPPC3-210ENST00000617904 CTSDP07339 412 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC3-210ENST00000617904 PSG2P11465 335 aa14.08□□□□□ -0.16
TRAPPC3-210ENST00000617904 AKR1C4P17516 323 aa14.08□□□□□ -0.16
TRAPPC3-210ENST00000617904 VAMP1P23763 118 aa14.08□□□□□ -0.16
TRAPPC3-210ENST00000617904 FCGR2CP31995 323 aa14.08□□□□□ -0.16
TRAPPC3-210ENST00000617904 UCP3P55916 312 aa14.08□□□□□ -0.16
TRAPPC3-210ENST00000617904 ATXN7L3Q14CW9 347 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC3-210ENST00000617904 HFEQ30201 348 aa14.08□□□□□ -0.16
TRAPPC3-210ENST00000617904 KRBOX4Q5JUW0 171 aa14.08□□□□□ -0.16
TRAPPC3-210ENST00000617904 ZNF880Q6PDB4 577 aa14.08□□□□□ -0.16
TRAPPC3-210ENST00000617904 LYG2Q86SG7 212 aa14.08□□□□□ -0.16
TRAPPC3-210ENST00000617904 SGPP2Q8IWX5 399 aa14.08□□□□□ -0.16
TRAPPC3-210ENST00000617904 C12orf45Q8N5I9 185 aaPredicted RBP14.08□□□□□ -0.16
TRAPPC3-210ENST00000617904 SPICQ8N5J4 248 aa14.08□□□□□ -0.16
TRAPPC3-210ENST00000617904 COQ8AQ8NI60 647 aa14.08□□□□□ -0.16
TRAPPC3-210ENST00000617904 KIRREL1Q96J84 757 aa14.08□□□□□ -0.16
TRAPPC3-210ENST00000617904 FAM234AQ9H0X4 552 aa14.08□□□□□ -0.16
TRAPPC3-210ENST00000617904 ZNF581Q9P0T4 197 aa14.08□□□□□ -0.16
TRAPPC3-210ENST00000617904 OPN4Q9UHM6 478 aa14.08□□□□□ -0.16
TRAPPC3-210ENST00000617904 ZNF469Q96JG9 3925 aaPredicted RBP14.07□□□□□ -0.16
TRAPPC3-210ENST00000617904 PPIAL4EA0A075B759 164 aa14.07□□□□□ -0.16
TRAPPC3-210ENST00000617904 PPIAL4DF5H284 164 aa14.07□□□□□ -0.16
TRAPPC3-210ENST00000617904 BET1O15155 118 aa14.07□□□□□ -0.16
TRAPPC3-210ENST00000617904 NDUFA2O43678 99 aa14.07□□□□□ -0.16
TRAPPC3-210ENST00000617904 PPIAL4FP0DN26 164 aa14.07□□□□□ -0.16
TRAPPC3-210ENST00000617904 CD99P14209 185 aa14.07□□□□□ -0.16
TRAPPC3-210ENST00000617904 GZMHP20718 246 aa14.07□□□□□ -0.16
TRAPPC3-210ENST00000617904 CD34P28906 385 aa14.07□□□□□ -0.16
TRAPPC3-210ENST00000617904 EIF2B2P49770 351 aaKnown RBP14.07□□□□□ -0.16
TRAPPC3-210ENST00000617904 CD83Q01151 205 aa14.07□□□□□ -0.16
TRAPPC3-210ENST00000617904 PAX5Q02548 391 aa14.07□□□□□ -0.16
TRAPPC3-210ENST00000617904 TCTE3Q8IZS6 198 aa14.07□□□□□ -0.16
TRAPPC3-210ENST00000617904 GAPTQ8N292 157 aa14.07□□□□□ -0.16
TRAPPC3-210ENST00000617904 GALMQ96C23 342 aa14.07□□□□□ -0.16
TRAPPC3-210ENST00000617904 SEC22CQ9BRL7 303 aa14.07□□□□□ -0.16
TRAPPC3-210ENST00000617904 NCOR1P1Q9H4R4 102 aa14.07□□□□□ -0.16
TRAPPC3-210ENST00000617904 CBLN4Q9NTU7 201 aa14.07□□□□□ -0.16
TRAPPC3-210ENST00000617904 MGAT4CQ9UBM8 478 aa14.07□□□□□ -0.16
TRAPPC3-210ENST00000617904 VSIG4Q9Y279 399 aa14.07□□□□□ -0.16
TRAPPC3-210ENST00000617904 PPIAL4AQ9Y536 164 aa14.07□□□□□ -0.16
TRAPPC3-210ENST00000617904 ITPR3Q14573 2671 aa14.07□□□□□ -0.16
TRAPPC3-210ENST00000617904 MEIKINA0A087WXM9 373 aa14.06□□□□□ -0.16
TRAPPC3-210ENST00000617904 IGHV1-69-2A0A0G2JMI3 117 aa14.06□□□□□ -0.16
TRAPPC3-210ENST00000617904 TEX13DA0A0J9YY54 714 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC3-210ENST00000617904 DEFB108AA8MXU0 73 aa14.06□□□□□ -0.16
TRAPPC3-210ENST00000617904 LGALS8O00214 317 aa14.06□□□□□ -0.16
TRAPPC3-210ENST00000617904 SPINT2O43291 252 aa14.06□□□□□ -0.16
TRAPPC3-210ENST00000617904 IL2RGP31785 369 aa14.06□□□□□ -0.16
TRAPPC3-210ENST00000617904 TEX36Q5VZQ5 186 aa14.06□□□□□ -0.16
TRAPPC3-210ENST00000617904 TGIF2LYQ8IUE0 185 aa14.06□□□□□ -0.16
TRAPPC3-210ENST00000617904 CMTM1Q8IZ96 169 aa14.06□□□□□ -0.16
TRAPPC3-210ENST00000617904 UXS1Q8NBZ7 420 aa14.06□□□□□ -0.16
TRAPPC3-210ENST00000617904 NEU4Q8WWR8 484 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC3-210ENST00000617904 TOMM40LQ969M1 308 aa14.06□□□□□ -0.16
TRAPPC3-210ENST00000617904 MOB3AQ96BX8 217 aa14.06□□□□□ -0.16
TRAPPC3-210ENST00000617904 RANBP3Q9H6Z4 567 aaPredicted RBP14.06□□□□□ -0.16
TRAPPC3-210ENST00000617904 OR6C3Q9NZP0 311 aa14.06□□□□□ -0.16
TRAPPC3-210ENST00000617904 DUS4LO95620 317 aaKnown RBP14.05□□□□□ -0.16
TRAPPC3-210ENST00000617904 PPYP01298 95 aa14.05□□□□□ -0.16
TRAPPC3-210ENST00000617904 SULT1A3P0DMM9 295 aa14.05□□□□□ -0.16
TRAPPC3-210ENST00000617904 SULT1A4P0DMN0 295 aa14.05□□□□□ -0.16
TRAPPC3-210ENST00000617904 ZBTB25P24278 435 aa14.05□□□□□ -0.16
TRAPPC3-210ENST00000617904 CD80P33681 288 aa14.05□□□□□ -0.16
TRAPPC3-210ENST00000617904 FXYD4P59646 89 aa14.05□□□□□ -0.16
TRAPPC3-210ENST00000617904 DAZAP2Q15038 168 aaPredicted RBP14.05□□□□□ -0.16
TRAPPC3-210ENST00000617904 FCN2Q15485 313 aa14.05□□□□□ -0.16
TRAPPC3-210ENST00000617904 SWI5Q1ZZU3 235 aa14.05□□□□□ -0.16
TRAPPC3-210ENST00000617904 SDSLQ96GA7 329 aa14.05□□□□□ -0.16
TRAPPC3-210ENST00000617904 CABLES2Q9BTV7 478 aa14.05□□□□□ -0.16
TRAPPC3-210ENST00000617904 DLL4Q9NR61 685 aa14.05□□□□□ -0.16
TRAPPC3-210ENST00000617904 MBNL3Q9NUK0 354 aaKnown RBP14.05□□□□□ -0.16
TRAPPC3-210ENST00000617904 TMEM106BQ9NUM4 274 aa14.05□□□□□ -0.16
TRAPPC3-210ENST00000617904 RBM7Q9Y580 266 aaKnown RBP14.05□□□□□ -0.16
TRAPPC3-210ENST00000617904 NF1P21359 2839 aa14.05□□□□□ -0.16
TRAPPC3-210ENST00000617904 IGKV1D-8A0A087WSZ0 117 aa14.04□□□□□ -0.16
TRAPPC3-210ENST00000617904 A0A0B4J2A0 478 aa14.04□□□□□ -0.16
TRAPPC3-210ENST00000617904 C9orf170A2RU37 121 aa14.04□□□□□ -0.16
TRAPPC3-210ENST00000617904 OR5H14A6NHG9 310 aa14.04□□□□□ -0.16
TRAPPC3-210ENST00000617904 A6NNC1 897 aa14.04□□□□□ -0.16
TRAPPC3-210ENST00000617904 NPIPB11E5RHQ5 1161 aa14.04□□□□□ -0.16
TRAPPC3-210ENST00000617904 SLC22A5O76082 557 aa14.04□□□□□ -0.16
TRAPPC3-210ENST00000617904 CYB5R3P00387 301 aaPredicted RBP14.04□□□□□ -0.16
TRAPPC3-210ENST00000617904 HPXP02790 462 aa14.04□□□□□ -0.16
TRAPPC3-210ENST00000617904 VSIG10L2P0DP72 767 aa14.04□□□□□ -0.16
TRAPPC3-210ENST00000617904 EGR1P18146 543 aa14.04□□□□□ -0.16
TRAPPC3-210ENST00000617904 ERP29P30040 261 aaKnown RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms