RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 STX12Q86Y82 276 aa14.96□□□□□ -0.01
DDX1-207ENST00000617198 ZDHHC23Q8IYP9 409 aa14.96□□□□□ -0.01
DDX1-207ENST00000617198 TMEM45BQ96B21 275 aa14.96□□□□□ -0.01
DDX1-207ENST00000617198 CRIM1Q9NZV1 1036 aa14.96□□□□□ -0.01
DDX1-207ENST00000617198 TNRC6BQ9UPQ9 1833 aaKnown RBP14.96□□□□□ -0.02
DDX1-207ENST00000617198 TRAPPC2LH3BP13 241 aa14.95□□□□□ -0.02
DDX1-207ENST00000617198 NDUFA6P56556 154 aa14.95□□□□□ -0.02
DDX1-207ENST00000617198 ERVFRD-1P60508 538 aa14.95□□□□□ -0.02
DDX1-207ENST00000617198 MKXQ8IYA7 352 aa14.95□□□□□ -0.02
DDX1-207ENST00000617198 ZNF610Q8N9Z0 462 aa14.95□□□□□ -0.02
DDX1-207ENST00000617198 DOK5Q9P104 306 aa14.95□□□□□ -0.02
DDX1-207ENST00000617198 URGCP-MRPS24S4R325 110 aa14.95□□□□□ -0.02
DDX1-207ENST00000617198 F2RP25116 425 aa14.95□□□□□ -0.02
DDX1-207ENST00000617198 GLIPR1P48060 266 aa14.95□□□□□ -0.02
DDX1-207ENST00000617198 TRA2AQ13595 282 aaKnown RBP eCLIP14.95□□□□□ -0.02
DDX1-207ENST00000617198 MRPL21Q7Z2W9 205 aaKnown RBP14.95□□□□□ -0.02
DDX1-207ENST00000617198 CALHM2Q9HA72 323 aa14.95□□□□□ -0.02
DDX1-207ENST00000617198 TINAGQ9UJW2 476 aa14.95□□□□□ -0.02
DDX1-207ENST00000617198 NOSIPQ9Y314 301 aaKnown RBP14.95□□□□□ -0.02
DDX1-207ENST00000617198 TRAV1-1A0A0B4J248 108 aa14.94□□□□□ -0.02
DDX1-207ENST00000617198 IFITM10A6NMD0 228 aa14.94□□□□□ -0.02
DDX1-207ENST00000617198 MRPL33O75394 65 aaKnown RBP14.94□□□□□ -0.02
DDX1-207ENST00000617198 GDF1P27539 372 aa14.94□□□□□ -0.02
DDX1-207ENST00000617198 S100GP29377 79 aa14.94□□□□□ -0.02
DDX1-207ENST00000617198 RNPS1Q15287 305 aaKnown RBP14.94□□□□□ -0.02
DDX1-207ENST00000617198 PCSK4Q6UW60 755 aa14.94□□□□□ -0.02
DDX1-207ENST00000617198 P4HA3Q7Z4N8 544 aa14.94□□□□□ -0.02
DDX1-207ENST00000617198 THNSL2Q86YJ6 484 aa14.94□□□□□ -0.02
DDX1-207ENST00000617198 OR10G4Q8NGN3 311 aa14.94□□□□□ -0.02
DDX1-207ENST00000617198 RIMS4Q9H426 269 aaPredicted RBP14.94□□□□□ -0.02
DDX1-207ENST00000617198 PILRBQ9UKJ0 227 aa14.94□□□□□ -0.02
DDX1-207ENST00000617198 MRPS18CQ9Y3D5 142 aaKnown RBP14.94□□□□□ -0.02
DDX1-207ENST00000617198 PIGBOS1A0A0B4J2F0 54 aa14.94□□□□□ -0.02
DDX1-207ENST00000617198 A0A0G2JRQ6 117 aa14.94□□□□□ -0.02
DDX1-207ENST00000617198 LOC102723971A0A1B0GUV8 181 aa14.94□□□□□ -0.02
DDX1-207ENST00000617198 NTN3O00634 580 aaPredicted RBP14.94□□□□□ -0.02
DDX1-207ENST00000617198 IFNA5P01569 189 aa14.94□□□□□ -0.02
DDX1-207ENST00000617198 ARF1P84077 181 aaKnown RBP14.94□□□□□ -0.02
DDX1-207ENST00000617198 ZFP36L1Q07352 338 aaKnown RBP14.94□□□□□ -0.02
DDX1-207ENST00000617198 Q0VFX4 171 aa14.94□□□□□ -0.02
DDX1-207ENST00000617198 SLC25A24Q6NUK1 477 aa14.94□□□□□ -0.02
DDX1-207ENST00000617198 GTF3AQ92664 365 aaKnown RBP14.94□□□□□ -0.02
DDX1-207ENST00000617198 GPR146Q96CH1 333 aa14.94□□□□□ -0.02
DDX1-207ENST00000617198 DEPPQ9NTK1 212 aa14.94□□□□□ -0.02
DDX1-207ENST00000617198 RYDENQ9NUL5 291 aaKnown RBP14.94□□□□□ -0.02
DDX1-207ENST00000617198 TGIF2-C20orf24A0A0A6YYL0 155 aa14.93□□□□□ -0.02
DDX1-207ENST00000617198 A0A1B0GU03 582 aa14.93□□□□□ -0.02
DDX1-207ENST00000617198 C5orf49A4QMS7 147 aa14.93□□□□□ -0.02
DDX1-207ENST00000617198 ZNHIT1O43257 154 aa14.93□□□□□ -0.02
DDX1-207ENST00000617198 SLC25A6P12236 298 aa14.93□□□□□ -0.02
DDX1-207ENST00000617198 CCL2P13500 99 aa14.93□□□□□ -0.02
DDX1-207ENST00000617198 S100A2P29034 98 aa14.93□□□□□ -0.02
DDX1-207ENST00000617198 GFRA1P56159 465 aa14.93□□□□□ -0.02
DDX1-207ENST00000617198 MRPL30Q8TCC3 161 aaKnown RBP14.93□□□□□ -0.02
DDX1-207ENST00000617198 DMRT1Q9Y5R6 373 aa14.93□□□□□ -0.02
DDX1-207ENST00000617198 A0A096LPE4 126 aa14.92□□□□□ -0.02
DDX1-207ENST00000617198 A0A1W2PPZ6 126 aa14.92□□□□□ -0.02
DDX1-207ENST00000617198 B4DEV8 164 aa14.92□□□□□ -0.02
DDX1-207ENST00000617198 H3BP45 60 aa14.92□□□□□ -0.02
DDX1-207ENST00000617198 IGHEP01854 428 aa14.92□□□□□ -0.02
DDX1-207ENST00000617198 HLA-DRB3P79483 266 aa14.92□□□□□ -0.02
DDX1-207ENST00000617198 C9orf135Q5VTT2 229 aa14.92□□□□□ -0.02
DDX1-207ENST00000617198 PPP1R32Q7Z5V6 425 aa14.92□□□□□ -0.02
DDX1-207ENST00000617198 H1FOOQ8IZA3 346 aaPredicted RBP14.92□□□□□ -0.02
DDX1-207ENST00000617198 RAB40CQ96S21 281 aa14.92□□□□□ -0.02
DDX1-207ENST00000617198 LINC00470Q9BZP3 86 aa14.92□□□□□ -0.02
DDX1-207ENST00000617198 GAR1Q9NY12 217 aaKnown RBP14.92□□□□□ -0.02
DDX1-207ENST00000617198 OR2W1Q9Y3N9 320 aa14.92□□□□□ -0.02
DDX1-207ENST00000617198 CYB5BO43169 146 aa14.92□□□□□ -0.02
DDX1-207ENST00000617198 SERPINE2P07093 398 aa14.92□□□□□ -0.02
DDX1-207ENST00000617198 OTX2P32243 289 aa14.92□□□□□ -0.02
DDX1-207ENST00000617198 TMEM267Q0VDI3 215 aaPredicted RBP14.92□□□□□ -0.02
DDX1-207ENST00000617198 PMS2CLQ68D20 193 aa14.92□□□□□ -0.02
DDX1-207ENST00000617198 ZNF324BQ6AW86 544 aaPredicted RBP14.92□□□□□ -0.02
DDX1-207ENST00000617198 C20orf204Q6ZNR8 217 aa14.92□□□□□ -0.02
DDX1-207ENST00000617198 LINC00596Q86U02 117 aa14.92□□□□□ -0.02
DDX1-207ENST00000617198 ZNF295-AS1Q8N0V1 137 aa14.92□□□□□ -0.02
DDX1-207ENST00000617198 APOBEC3DQ96AK3 386 aaPredicted RBP14.92□□□□□ -0.02
DDX1-207ENST00000617198 BCL2L14Q9BZR8 327 aa14.92□□□□□ -0.02
DDX1-207ENST00000617198 GNG13Q9P2W3 67 aa14.92□□□□□ -0.02
DDX1-207ENST00000617198 TNRC6AQ8NDV7 1962 aaKnown RBP14.91□□□□□ -0.02
DDX1-207ENST00000617198 IGKV3D-15A0A087WSY6 115 aa14.91□□□□□ -0.02
DDX1-207ENST00000617198 PINLYPA6NC86 204 aa14.91□□□□□ -0.02
DDX1-207ENST00000617198 KIAA1324LA8MWY0 1029 aaPredicted RBP14.91□□□□□ -0.02
DDX1-207ENST00000617198 ATXN7O15265 892 aaPredicted RBP14.91□□□□□ -0.02
DDX1-207ENST00000617198 SYNGR1O43759 233 aa14.91□□□□□ -0.02
DDX1-207ENST00000617198 HLA-HP01893 362 aa14.91□□□□□ -0.02
DDX1-207ENST00000617198 PYY3Q5JQD4 70 aa14.91□□□□□ -0.02
DDX1-207ENST00000617198 OR5A2Q8NGI9 324 aa14.91□□□□□ -0.02
DDX1-207ENST00000617198 OR13D1Q8NGV5 346 aa14.91□□□□□ -0.02
DDX1-207ENST00000617198 OR51H1Q8NH63 302 aa14.91□□□□□ -0.02
DDX1-207ENST00000617198 OR10J5Q8NHC4 309 aa14.91□□□□□ -0.02
DDX1-207ENST00000617198 PSMF1Q92530 271 aa14.91□□□□□ -0.02
DDX1-207ENST00000617198 HIST1H2AAQ96QV6 131 aa14.91□□□□□ -0.02
DDX1-207ENST00000617198 PLK3Q9H4B4 646 aa14.91□□□□□ -0.02
DDX1-207ENST00000617198 TRBV23-1A0A0A0MS06 115 aa14.91□□□□□ -0.02
DDX1-207ENST00000617198 TRBV6-6A0A0A6YYG2 114 aa14.91□□□□□ -0.02
DDX1-207ENST00000617198 YKT6O15498 198 aa14.91□□□□□ -0.02
DDX1-207ENST00000617198 HIST1H2BKO60814 126 aa14.91□□□□□ -0.02
DDX1-207ENST00000617198 CNOT4O95628 575 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms