RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 DNM1P34Q6PK57 102 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 CLEC18BQ6UXF7 455 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 ZNF664Q8N3J9 261 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 ZADH2Q8N4Q0 377 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 CISD2Q8N5K1 135 aaKnown RBP8.57□□□□□ -1.04
GGA3-221ENST00000614198 OR4D6Q8NGJ1 314 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 OR2AJ1Q8NGZ0 328 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 R3HDM4Q96D70 268 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 HIST1H2BLQ99880 126 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 SMDT1Q9H4I9 107 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 GPR35Q9HC97 309 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 FBXL17Q9UF56 701 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 OR52A1Q9UKL2 312 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 MRPS18CQ9Y3D5 142 aaKnown RBP8.57□□□□□ -1.04
GGA3-221ENST00000614198 FLNCQ14315 2725 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 TRAV17A0A0B4J275 112 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 NPIPB13A6NJU9 1138 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 ZNF727A8MUV8 499 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 NPIPB4C9JG80 1138 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 C3orf80F5H4A9 247 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 TTRP02766 147 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 RPL12P30050 165 aaKnown RBP8.57□□□□□ -1.04
GGA3-221ENST00000614198 ASCL1P50553 236 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 SNAI3Q3KNW1 292 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 P4HA3Q7Z4N8 544 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 RTN4RL2Q86UN3 420 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 CATSPERDQ86XM0 798 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 GPR137CQ8N3F9 429 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 CNEP1R1Q8N9A8 125 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 TERB2Q8NHR7 220 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 FAM213BQ8TBF2 198 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 TMEM230Q96A57 120 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 FAM71F1Q96KD3 344 aaPredicted RBP8.57□□□□□ -1.04
GGA3-221ENST00000614198 FAM206AQ9NX38 181 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 PLEK2Q9NYT0 353 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 MSRB2Q9Y3D2 182 aa8.57□□□□□ -1.04
GGA3-221ENST00000614198 LOC107986453A0A1B0GWG9 222 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 SLC22A20A6NK97 555 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 RRP8O43159 456 aaKnown RBP8.56□□□□□ -1.04
GGA3-221ENST00000614198 VAMP5O95183 116 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 CRYABP02511 175 aaKnown RBP8.56□□□□□ -1.04
GGA3-221ENST00000614198 TRGC2P03986 189 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 SEC11BP0C7V7 166 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 ZNF32P17041 273 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 FKBP2P26885 142 aaKnown RBP8.56□□□□□ -1.04
GGA3-221ENST00000614198 HSD11B1P28845 292 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 ARF1P84077 181 aaKnown RBP8.56□□□□□ -1.04
GGA3-221ENST00000614198 ROM1Q03395 351 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 VWA1Q6PCB0 445 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 SLC22A25Q6T423 547 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 SUMF2Q8NBJ7 301 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 OR5H2Q8NGV7 314 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 SLC25A31Q9H0C2 315 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 NELFAQ9H3P2 528 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 ZNF701Q9NV72 531 aaPredicted RBP8.56□□□□□ -1.04
GGA3-221ENST00000614198 CSMD1Q96PZ7 3565 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 CEACAM18A8MTB9 384 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 SYNGR4O95473 234 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 IGFBP3P17936 291 aaPredicted RBP8.56□□□□□ -1.04
GGA3-221ENST00000614198 MSR1P21757 451 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 GLRA1P23415 457 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 BATFQ16520 125 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 ANKRD55Q3KP44 614 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 ZNF343Q6P1L6 599 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 MYPOPQ86VE0 399 aaPredicted RBP8.56□□□□□ -1.04
GGA3-221ENST00000614198 C9orf106Q8NAJ2 232 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 CPEB3Q8NE35 698 aaKnown RBP8.56□□□□□ -1.04
GGA3-221ENST00000614198 CSNK2A3Q8NEV1 391 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 OR5D18Q8NGL1 313 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 RNASEH2CQ8TDP1 164 aaKnown RBP8.56□□□□□ -1.04
GGA3-221ENST00000614198 ASB5Q8WWX0 329 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 FOXB1Q99853 325 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 PBOV1Q9GZY1 135 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 MCTS1Q9ULC4 181 aaKnown RBP8.56□□□□□ -1.04
GGA3-221ENST00000614198 GPR132Q9UNW8 380 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 POLEQ07864 2286 aa8.56□□□□□ -1.04
GGA3-221ENST00000614198 XRCC2O43543 280 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 TRGC1P0CF51 173 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 GZMBP10144 247 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 CD200P41217 278 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 TMEM33P57088 247 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 ERVFRD-1P60508 538 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 TBR1Q16650 682 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 OR8B12Q8NGG6 310 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 ABHD5Q8WTS1 349 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 ADAT3Q96EY9 351 aaPredicted RBP8.55□□□□□ -1.04
GGA3-221ENST00000614198 ACTR3CQ9C0K3 210 aaPredicted RBP8.55□□□□□ -1.04
GGA3-221ENST00000614198 C5orf66Q9H5L9 145 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 MEGF11A6BM72 1044 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 LYZL6O75951 148 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 FSTP19883 344 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 TAGLN2P37802 199 aaKnown RBP8.55□□□□□ -1.04
GGA3-221ENST00000614198 PSG4Q00888 419 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 SLC22A24Q8N4F4 322 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 ZNF283Q8N7M2 679 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 LFNGQ8NES3 379 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 RAB39BQ96DA2 213 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 LYZL4Q96KX0 146 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 CNTD2Q9H8S5 307 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 TMEM38BQ9NVV0 291 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms