RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 NKX2-8O15522 239 aa14.18□□□□□ -0.14
CNOT3-208ENST00000613073 HLA-HP01893 362 aa14.18□□□□□ -0.14
CNOT3-208ENST00000613073 GABRR1P24046 479 aa14.18□□□□□ -0.14
CNOT3-208ENST00000613073 PCBD1P61457 104 aa14.18□□□□□ -0.14
CNOT3-208ENST00000613073 C5orf24Q7Z6I8 188 aa14.18□□□□□ -0.14
CNOT3-208ENST00000613073 ZFP62Q8NB50 900 aaPredicted RBP14.18□□□□□ -0.14
CNOT3-208ENST00000613073 TMEM45BQ96B21 275 aa14.18□□□□□ -0.14
CNOT3-208ENST00000613073 KMT2EQ8IZD2 1858 aa14.18□□□□□ -0.14
CNOT3-208ENST00000613073 ZNF292O60281 2723 aa14.18□□□□□ -0.14
CNOT3-208ENST00000613073 DSPP15924 2871 aaKnown RBP14.18□□□□□ -0.14
CNOT3-208ENST00000613073 IGKV3D-15A0A087WSY6 115 aa14.17□□□□□ -0.14
CNOT3-208ENST00000613073 BORCS7-ASMTA0A0B4J1R7 106 aa14.17□□□□□ -0.14
CNOT3-208ENST00000613073 MMP7P09237 267 aaPredicted RBP14.17□□□□□ -0.14
CNOT3-208ENST00000613073 CYB561D1Q8N8Q1 229 aa14.17□□□□□ -0.14
CNOT3-208ENST00000613073 GSTP1P09211 210 aaKnown RBP14.17□□□□□ -0.14
CNOT3-208ENST00000613073 SEC11BP0C7V7 166 aa14.17□□□□□ -0.14
CNOT3-208ENST00000613073 CD46P15529 392 aa14.17□□□□□ -0.14
CNOT3-208ENST00000613073 SNU13P55769 128 aaKnown RBP14.17□□□□□ -0.14
CNOT3-208ENST00000613073 SLC10A1Q14973 349 aa14.17□□□□□ -0.14
CNOT3-208ENST00000613073 RNFT1Q5M7Z0 435 aa14.17□□□□□ -0.14
CNOT3-208ENST00000613073 VAX1Q5SQQ9 334 aa14.17□□□□□ -0.14
CNOT3-208ENST00000613073 ZNF429Q86V71 674 aa14.17□□□□□ -0.14
CNOT3-208ENST00000613073 SLC25A31Q9H0C2 315 aa14.17□□□□□ -0.14
CNOT3-208ENST00000613073 OR14J1Q9UGF5 321 aa14.17□□□□□ -0.14
CNOT3-208ENST00000613073 IGKV1-27A0A075B6S5 117 aa14.17□□□□□ -0.14
CNOT3-208ENST00000613073 UCP2P55851 309 aa14.17□□□□□ -0.14
CNOT3-208ENST00000613073 TNFRSF9Q07011 255 aa14.17□□□□□ -0.14
CNOT3-208ENST00000613073 Q6ZSR3 168 aa14.17□□□□□ -0.14
CNOT3-208ENST00000613073 NUDT16L1Q9BRJ7 211 aaKnown RBP14.17□□□□□ -0.14
CNOT3-208ENST00000613073 C12orf49Q9H741 205 aa14.17□□□□□ -0.14
CNOT3-208ENST00000613073 C1orf123Q9NWV4 160 aa14.17□□□□□ -0.14
CNOT3-208ENST00000613073 KCNIP3Q9Y2W7 256 aa14.17□□□□□ -0.14
CNOT3-208ENST00000613073 RPL36A-HNRNPH2H7BZ11 118 aa14.16□□□□□ -0.14
CNOT3-208ENST00000613073 MBP02144 154 aa14.16□□□□□ -0.14
CNOT3-208ENST00000613073 EDN3P14138 238 aa14.16□□□□□ -0.14
CNOT3-208ENST00000613073 NUBP1P53384 320 aa14.16□□□□□ -0.14
CNOT3-208ENST00000613073 RND3P61587 244 aa14.16□□□□□ -0.14
CNOT3-208ENST00000613073 PMP22Q01453 160 aa14.16□□□□□ -0.14
CNOT3-208ENST00000613073 NUFIP2Q7Z417 695 aaKnown RBP14.16□□□□□ -0.14
CNOT3-208ENST00000613073 PEG10Q86TG7 708 aaKnown RBP14.16□□□□□ -0.14
CNOT3-208ENST00000613073 C10orf35Q96D05 121 aa14.16□□□□□ -0.14
CNOT3-208ENST00000613073 SIRT7Q9NRC8 400 aa14.16□□□□□ -0.14
CNOT3-208ENST00000613073 ZNF701Q9NV72 531 aaPredicted RBP14.16□□□□□ -0.14
CNOT3-208ENST00000613073 C14orf166Q9Y224 244 aaKnown RBP14.16□□□□□ -0.14
CNOT3-208ENST00000613073 ELOA3CA0A087WX78 387 aaPredicted RBP14.16□□□□□ -0.14
CNOT3-208ENST00000613073 ZNF503-AS2A6NEH8 195 aa14.16□□□□□ -0.14
CNOT3-208ENST00000613073 RBFOX3A6NFN3 312 aa14.16□□□□□ -0.14
CNOT3-208ENST00000613073 MBPP02686 304 aaPredicted RBP14.16□□□□□ -0.14
CNOT3-208ENST00000613073 ZNF25P17030 456 aaPredicted RBP14.16□□□□□ -0.14
CNOT3-208ENST00000613073 CCL11P51671 97 aa14.16□□□□□ -0.14
CNOT3-208ENST00000613073 ZNF766Q5HY98 468 aa14.16□□□□□ -0.14
CNOT3-208ENST00000613073 C6orf201Q7Z4U5 140 aa14.16□□□□□ -0.14
CNOT3-208ENST00000613073 ZNF581Q9P0T4 197 aa14.16□□□□□ -0.14
CNOT3-208ENST00000613073 OSGIN2Q9Y236 505 aa14.16□□□□□ -0.14
CNOT3-208ENST00000613073 HSD17B6O14756 317 aa14.15□□□□□ -0.14
CNOT3-208ENST00000613073 NRASP01111 189 aa14.15□□□□□ -0.14
CNOT3-208ENST00000613073 GZMBP10144 247 aa14.15□□□□□ -0.14
CNOT3-208ENST00000613073 KRTAP27-1Q3LI81 207 aa14.15□□□□□ -0.14
CNOT3-208ENST00000613073 MCEMP1Q8IX19 187 aa14.15□□□□□ -0.14
CNOT3-208ENST00000613073 FAM89BQ8N5H3 189 aa14.15□□□□□ -0.14
CNOT3-208ENST00000613073 PIGCQ92535 297 aa14.15□□□□□ -0.14
CNOT3-208ENST00000613073 APH1AQ96BI3 265 aa14.15□□□□□ -0.14
CNOT3-208ENST00000613073 FAM210BQ96KR6 192 aa14.15□□□□□ -0.14
CNOT3-208ENST00000613073 SCGB3A2Q96PL1 93 aa14.15□□□□□ -0.14
CNOT3-208ENST00000613073 TMED3Q9Y3Q3 217 aa14.15□□□□□ -0.14
CNOT3-208ENST00000613073 IFNA21P01568 189 aa14.15□□□□□ -0.14
CNOT3-208ENST00000613073 OR5H8P0DN80 308 aa14.15□□□□□ -0.14
CNOT3-208ENST00000613073 ALDH3B1P43353 468 aa14.15□□□□□ -0.14
CNOT3-208ENST00000613073 P2RY1P47900 373 aa14.15□□□□□ -0.14
CNOT3-208ENST00000613073 PCP4P48539 62 aa14.15□□□□□ -0.14
CNOT3-208ENST00000613073 BATF2Q8N1L9 274 aa14.15□□□□□ -0.14
CNOT3-208ENST00000613073 BORCS8Q96FH0 119 aa14.15□□□□□ -0.14
CNOT3-208ENST00000613073 NDUFAF3Q9BU61 184 aa14.15□□□□□ -0.14
CNOT3-208ENST00000613073 PECRQ9BY49 303 aa14.15□□□□□ -0.14
CNOT3-208ENST00000613073 ZNF552Q9H707 407 aaPredicted RBP14.15□□□□□ -0.14
CNOT3-208ENST00000613073 HSF4Q9ULV5 492 aa14.15□□□□□ -0.14
CNOT3-208ENST00000613073 HIKESHIQ53FT3 197 aa14.14□□□□□ -0.15
CNOT3-208ENST00000613073 SGPP2Q8IWX5 399 aa14.14□□□□□ -0.15
CNOT3-208ENST00000613073 ZNF100Q8IYN0 542 aa14.14□□□□□ -0.15
CNOT3-208ENST00000613073 hCG_38984A0A1B0GV85 526 aa14.14□□□□□ -0.15
CNOT3-208ENST00000613073 C5orf49A4QMS7 147 aa14.14□□□□□ -0.15
CNOT3-208ENST00000613073 FGF7P21781 194 aa14.14□□□□□ -0.15
CNOT3-208ENST00000613073 OMGP23515 440 aa14.14□□□□□ -0.15
CNOT3-208ENST00000613073 TAF9Q16594 264 aa14.14□□□□□ -0.15
CNOT3-208ENST00000613073 LBHQ53QV2 105 aaPredicted RBP14.14□□□□□ -0.15
CNOT3-208ENST00000613073 LRP11Q86VZ4 500 aa14.14□□□□□ -0.15
CNOT3-208ENST00000613073 LHFPL1Q86WI0 220 aa14.14□□□□□ -0.15
CNOT3-208ENST00000613073 HDHD3Q9BSH5 251 aaPredicted RBP14.14□□□□□ -0.15
CNOT3-208ENST00000613073 IGKV1D-8A0A087WSZ0 117 aa14.13□□□□□ -0.15
CNOT3-208ENST00000613073 MKRN2OSH3BPM6 223 aa14.13□□□□□ -0.15
CNOT3-208ENST00000613073 SLC33A1O00400 549 aaPredicted RBP14.13□□□□□ -0.15
CNOT3-208ENST00000613073 RAB4BP61018 213 aa14.13□□□□□ -0.15
CNOT3-208ENST00000613073 CNN3Q15417 329 aaKnown RBP14.13□□□□□ -0.15
CNOT3-208ENST00000613073 FAM189A2Q15884 450 aa14.13□□□□□ -0.15
CNOT3-208ENST00000613073 TOMM40LQ969M1 308 aa14.13□□□□□ -0.15
CNOT3-208ENST00000613073 SPSB1Q96BD6 273 aa14.13□□□□□ -0.15
CNOT3-208ENST00000613073 GINS3Q9BRX5 216 aa14.13□□□□□ -0.15
CNOT3-208ENST00000613073 LINC00470Q9BZP3 86 aa14.13□□□□□ -0.15
CNOT3-208ENST00000613073 PLEKHJ1Q9NW61 149 aa14.13□□□□□ -0.15
CNOT3-208ENST00000613073 SPRR3Q9UBC9 169 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms