RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 COX5AP20674 150 aa11.34□□□□□ -0.59
TCF3-220ENST00000611869 NHLH2Q02577 135 aa11.34□□□□□ -0.59
TCF3-220ENST00000611869 ZNF552Q9H707 407 aaPredicted RBP11.34□□□□□ -0.59
TCF3-220ENST00000611869 AMDHD2Q9Y303 409 aa11.34□□□□□ -0.59
TCF3-220ENST00000611869 OR5H1A6NKK0 313 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 SYNGR2O43760 224 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 CDS2O95674 445 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 MELTFP08582 738 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 PSG2P11465 335 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 P2RY1P47900 373 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 SLC38A11Q08AI6 406 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 FOXO1Q12778 655 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 USF2Q15853 346 aaPredicted RBP11.33□□□□□ -0.6
TCF3-220ENST00000611869 RTL8BQ17RB0 113 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 CALHM1Q8IU99 346 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 COMMD5Q9GZQ3 224 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 UQCC1Q9NVA1 299 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 NDRG3Q9UGV2 375 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 HSF4Q9ULV5 492 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 AQP7O14520 342 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 DVL1P1P54792 670 aaPredicted RBP11.33□□□□□ -0.6
TCF3-220ENST00000611869 CLEC12BQ2HXU8 276 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 ARSJQ5FYB0 599 aaPredicted RBP11.33□□□□□ -0.6
TCF3-220ENST00000611869 PAQR4Q8N4S7 273 aaPredicted RBP11.33□□□□□ -0.6
TCF3-220ENST00000611869 RBMXL3Q8N7X1 1067 aaKnown RBP11.33□□□□□ -0.6
TCF3-220ENST00000611869 CLRN3Q8NCR9 226 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 PINX1Q96BK5 328 aaKnown RBP11.33□□□□□ -0.6
TCF3-220ENST00000611869 SAT2Q96F10 170 aaPredicted RBP11.33□□□□□ -0.6
TCF3-220ENST00000611869 ACTR3CQ9C0K3 210 aaPredicted RBP11.33□□□□□ -0.6
TCF3-220ENST00000611869 FER1L5A0AVI2 2057 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 LOC390937A0A1W2PQ73 354 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 PINLYPA6NC86 204 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 MT-ND4LP03901 98 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 IL3RAP26951 378 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 EWSR1Q01844 656 aaKnown RBP eCLIP11.33□□□□□ -0.67e-7■■■■□ 20
TCF3-220ENST00000611869 HES1Q14469 280 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 ASPHD2Q6ICH7 369 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 OR4A4PQ8NGN8 299 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 NANPQ8TBE9 248 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 UHRF2Q96PU4 802 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 V9GYS6 101 aa11.33□□□□□ -0.6
TCF3-220ENST00000611869 ZFHX2Q9C0A1 2572 aaPredicted RBP11.33□□□□□ -0.6
TCF3-220ENST00000611869 hCG_38984A0A1B0GV85 526 aa11.32□□□□□ -0.6
TCF3-220ENST00000611869 PRSS44E7EML9 344 aa11.32□□□□□ -0.6
TCF3-220ENST00000611869 CEBPDP49716 269 aaPredicted RBP11.32□□□□□ -0.6
TCF3-220ENST00000611869 KIF26AQ9ULI4 1882 aaPredicted RBP11.32□□□□□ -0.6
TCF3-220ENST00000611869 SOX15O60248 233 aa11.32□□□□□ -0.6
TCF3-220ENST00000611869 NDUFA6P56556 154 aa11.32□□□□□ -0.6
TCF3-220ENST00000611869 SMIM7Q9BQ49 75 aa11.32□□□□□ -0.6
TCF3-220ENST00000611869 NUDT16L1Q9BRJ7 211 aaKnown RBP11.32□□□□□ -0.6
TCF3-220ENST00000611869 RNF122Q9H9V4 155 aa11.32□□□□□ -0.6
TCF3-220ENST00000611869 GAB2Q9UQC2 676 aa11.32□□□□□ -0.6
TCF3-220ENST00000611869 MYO7BQ6PIF6 2116 aa11.32□□□□□ -0.6
TCF3-220ENST00000611869 NUP210Q8TEM1 1887 aaPredicted RBP11.32□□□□□ -0.6
TCF3-220ENST00000611869 IGHV3OR15-7A0A075B7D8 119 aa11.32□□□□□ -0.6
TCF3-220ENST00000611869 hCG_1809904A0A1W2PP81 198 aa11.32□□□□□ -0.6
TCF3-220ENST00000611869 A0A1W2PPE2 198 aa11.32□□□□□ -0.6
TCF3-220ENST00000611869 A0A1W2PR64 198 aa11.32□□□□□ -0.6
TCF3-220ENST00000611869 A0A1W2PRV1 198 aa11.32□□□□□ -0.6
TCF3-220ENST00000611869 HTD2P86397 168 aa11.32□□□□□ -0.6
TCF3-220ENST00000611869 KCNIP2Q9NS61 270 aa11.32□□□□□ -0.6
TCF3-220ENST00000611869 RYDENQ9NUL5 291 aaKnown RBP11.32□□□□□ -0.6
TCF3-220ENST00000611869 SSUH2Q9Y2M2 353 aa11.32□□□□□ -0.6
TCF3-220ENST00000611869 WSB1Q9Y6I7 421 aa11.32□□□□□ -0.6
TCF3-220ENST00000611869 GALR2O43603 387 aaPredicted RBP11.32□□□□□ -0.6
TCF3-220ENST00000611869 SLC25A6P12236 298 aa11.32□□□□□ -0.6
TCF3-220ENST00000611869 PPP1CCP36873 323 aaKnown RBP11.32□□□□□ -0.6
TCF3-220ENST00000611869 UBE2G2P60604 165 aa11.32□□□□□ -0.6
TCF3-220ENST00000611869 KIAA0141Q14154 515 aaPredicted RBP11.32□□□□□ -0.6
TCF3-220ENST00000611869 NECAP1Q8NC96 275 aa11.32□□□□□ -0.6
TCF3-220ENST00000611869 LYZL4Q96KX0 146 aa11.32□□□□□ -0.6
TCF3-220ENST00000611869 FAM90A27PA6NNH2 459 aa11.31□□□□□ -0.6
TCF3-220ENST00000611869 OR2H2O95918 312 aa11.31□□□□□ -0.6
TCF3-220ENST00000611869 OPN1MWP04001 364 aa11.31□□□□□ -0.6
TCF3-220ENST00000611869 OPN1MW2P0DN77 364 aa11.31□□□□□ -0.6
TCF3-220ENST00000611869 OPN1MW3P0DN78 364 aa11.31□□□□□ -0.6
TCF3-220ENST00000611869 ZIC4Q8N9L1 334 aa11.31□□□□□ -0.6
TCF3-220ENST00000611869 OOEPA6NGQ2 149 aa11.31□□□□□ -0.6
TCF3-220ENST00000611869 H7BYZ3 331 aa11.31□□□□□ -0.6
TCF3-220ENST00000611869 ZNF385CQ66K41 422 aaPredicted RBP11.31□□□□□ -0.6
TCF3-220ENST00000611869 DLL3Q9NYJ7 618 aa11.31□□□□□ -0.6
TCF3-220ENST00000611869 CRYM-AS1A6NIL9 109 aa11.31□□□□□ -0.6
TCF3-220ENST00000611869 LRRC3CA6NJW4 275 aa11.31□□□□□ -0.6
TCF3-220ENST00000611869 FGF8P55075 233 aaPredicted RBP11.31□□□□□ -0.6
TCF3-220ENST00000611869 ACOT6Q3I5F7 207 aaPredicted RBP11.31□□□□□ -0.6
TCF3-220ENST00000611869 KCNIP4Q6PIL6 250 aa11.31□□□□□ -0.6
TCF3-220ENST00000611869 MOB3AQ96BX8 217 aa11.31□□□□□ -0.6
TCF3-220ENST00000611869 POMT1Q9Y6A1 747 aa11.31□□□□□ -0.6
TCF3-220ENST00000611869 C2orf16Q68DN1 1984 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 MDFIC2A0A1B0GVS7 189 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 C5orf63A6NC05 138 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 ZNF716A6NP11 495 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 PRR33A8MZF0 331 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 C1QL1O75973 258 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 MBPP02686 304 aaPredicted RBP11.3□□□□□ -0.6
TCF3-220ENST00000611869 F2RP25116 425 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 NHLRC3Q5JS37 347 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 COMMD1Q8N668 190 aa11.3□□□□□ -0.6
TCF3-220ENST00000611869 RCC2Q9P258 522 aaKnown RBP11.3□□□□□ -0.6
TCF3-220ENST00000611869 LIPGQ9Y5X9 500 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms