RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 IGHV3-9P01782 118 aa12.94□□□□□ -0.34
PCDHGB1-202ENST00000611598 BCL2P10415 239 aa12.94□□□□□ -0.34
PCDHGB1-202ENST00000611598 ZNF787Q6DD87 383 aa12.94□□□□□ -0.34
PCDHGB1-202ENST00000611598 OR51H1Q8NH63 302 aa12.94□□□□□ -0.34
PCDHGB1-202ENST00000611598 CPT1CQ8TCG5 803 aa12.94□□□□□ -0.34
PCDHGB1-202ENST00000611598 NEK7Q8TDX7 302 aa12.94□□□□□ -0.34
PCDHGB1-202ENST00000611598 GPR146Q96CH1 333 aa12.94□□□□□ -0.34
PCDHGB1-202ENST00000611598 HIPK2Q9H2X6 1198 aa12.94□□□□□ -0.34
PCDHGB1-202ENST00000611598 SMOC1Q9H4F8 434 aa12.94□□□□□ -0.34
PCDHGB1-202ENST00000611598 IGHV1-45A0A0A0MS14 117 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 CLDN34H7C241 214 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 SRFP11831 508 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 MMP9P14780 707 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 RND2P52198 227 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 RAC3P60763 192 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 Q6ZRM9 215 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 STX12Q86Y82 276 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 CPEB3Q8NE35 698 aaKnown RBP12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 OR5D13Q8NGL4 314 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 PACRGQ96M98 296 aaPredicted RBP12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 HIST1H2BLQ99880 126 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 CHD3Q12873 2000 aaKnown RBP12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 TRAV1-1A0A0B4J248 108 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 B4DEV8 164 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 H0Y980 276 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 CXCL13O43927 109 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 CYB5R3P00387 301 aaPredicted RBP12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 UMODP07911 640 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 CD55P08174 381 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 GPM6AP51674 278 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 TLE1Q04724 770 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 ARL16Q0P5N6 197 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 FOXO1Q12778 655 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 FAM180AQ6UWF9 173 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 DPPA3Q6W0C5 159 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 C20orf204Q6ZNR8 217 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 Q6ZS49 121 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 OR56B2PQ8NGI1 322 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 OR10G4Q8NGN3 311 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 CA5BP1Q8WTZ4 195 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 SF3B5Q9BWJ5 86 aaKnown RBP12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 PCED1AQ9H1Q7 454 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 ZNF391Q9UJN7 358 aa12.93□□□□□ -0.34
PCDHGB1-202ENST00000611598 LY6G6EA0A0G2JKS1 128 aa12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 DUXBA0A1W2PPF3 345 aa12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 KIAA1324LA8MWY0 1029 aaPredicted RBP12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 IFNA5P01569 189 aa12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 SSR4P51571 173 aa12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 B3GALT5-AS1P59052 145 aa12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 H1FOOQ8IZA3 346 aaPredicted RBP12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 M1APQ8TC57 530 aa12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 CISD1Q9NZ45 108 aaKnown RBP12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 U3KQA8 63 aa12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 DFFBO76075 338 aa12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 IAPPP10997 89 aa12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 PSG2P11465 335 aa12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 COX6A1P12074 109 aa12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 CCL2P13500 99 aa12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 DDTP30046 118 aa12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 CARD18P57730 90 aa12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 OR8G1Q15617 311 aa12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 TDHQ8IZJ6 230 aa12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 GTF3AQ92664 365 aaKnown RBP12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 IMMP1LQ96LU5 166 aa12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 SDF2L1Q9HCN8 221 aa12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 SH2D2AQ9NP31 389 aa12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 FSCN3Q9NQT6 498 aa12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 LRFN1Q9P244 771 aa12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 DMDP11532 3685 aa12.92□□□□□ -0.34
PCDHGB1-202ENST00000611598 CACNA1EQ15878 2313 aa12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 METTL15P1P0C7V9 234 aa12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 CCNOP22674 350 aa12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 F2RP25116 425 aa12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 IL2RGP31785 369 aa12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 PCSK4Q6UW60 755 aa12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 GGNQ86UU5 652 aa12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 DMRTC2Q8IXT2 367 aaPredicted RBP12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 Q8NFD4 153 aa12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 OR2V1Q8NHB1 315 aa12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 RCC1LQ96I51 464 aaKnown RBP12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 UFSP2Q9NUQ7 469 aa12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 MTCH1Q9NZJ7 389 aa12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 OR14J1Q9UGF5 321 aa12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 NCKAP5O14513 1909 aa12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 LOC102723996A0A087X1L8 192 aa12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 PRDX4Q13162 271 aa12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 SSX9Q7RTT3 188 aa12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 DNASE2BQ8WZ79 361 aa12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 SPSB4Q96A44 273 aa12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 CABLES2Q9BTV7 478 aa12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 PRO3102Q9H379 93 aa12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 GPR35Q9HC97 309 aa12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 ATP23Q9Y6H3 246 aa12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 KIAA2026Q5HYC2 2103 aa12.91□□□□□ -0.34
PCDHGB1-202ENST00000611598 A0A087X0M5 115 aa12.9□□□□□ -0.34
PCDHGB1-202ENST00000611598 A0A1B0GX30 115 aa12.9□□□□□ -0.34
PCDHGB1-202ENST00000611598 CEBPZOSA8MTT3 80 aa12.9□□□□□ -0.34
PCDHGB1-202ENST00000611598 CBR3O75828 277 aa12.9□□□□□ -0.34
PCDHGB1-202ENST00000611598 MMP7P09237 267 aaPredicted RBP12.9□□□□□ -0.34
PCDHGB1-202ENST00000611598 FGF12P61328 243 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms