RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 MMP23AO75900 390 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 FCER2P06734 321 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 MELTFP08582 738 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 ZNF728P0DKX0 622 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 CGB3P0DN86 165 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 CGB7P0DN87 165 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 CD99P14209 185 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 OMGP23515 440 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 PRSS3P35030 304 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 GDNFP39905 211 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 DLX6P56179 175 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 ZNF79Q15937 498 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 LTC4SQ16873 150 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 PNLIPRP3Q17RR3 467 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 C17orf58Q2M2W7 97 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 C11orf91Q3C1V1 193 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 PRAMEF5Q5TYX0 476 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 ZNF880Q6PDB4 577 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 FAM131AQ6UXB0 335 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 BTNL3Q6UXE8 466 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 BAIAP2L2Q6UXY1 529 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 ZNF782Q6ZMW2 699 aaPredicted RBP6.31□□□□□ -1.4
MSH6-211ENST00000606499 KIR3DL3Q8N743 410 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 GVQW1Q8N7I0 195 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 Q8N7P7 452 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 CORO2AQ92828 525 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 PCGF1Q9BSM1 259 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 SIRPDQ9H106 197 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 GAL3ST2Q9H3Q3 398 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 MBNL3Q9NUK0 354 aaKnown RBP6.31□□□□□ -1.4
MSH6-211ENST00000606499 OR6C3Q9NZP0 311 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 UBE2J1Q9Y385 318 aaPredicted RBP6.31□□□□□ -1.4
MSH6-211ENST00000606499 ZFHX3Q15911 3703 aa6.31□□□□□ -1.4
MSH6-211ENST00000606499 TLN2Q9Y4G6 2542 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 MALRD1Q5VYJ5 2156 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 IGKV1D-8A0A087WSZ0 117 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 TRBV6-6A0A0A6YYG2 114 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 KBTBD11-OT1A0A1B0GTJ5 212 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 FAM172BPA6NC97 362 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 ZNF729A6NN14 1252 aaPredicted RBP6.3□□□□□ -1.4
MSH6-211ENST00000606499 C17orf98A8MV24 154 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 C15orf65H3BRN8 121 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 CD5LO43866 347 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 TOX4O94842 621 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 LY6G6DO95868 133 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 AVPP01185 164 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 HBZP02008 142 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 LPLP06858 475 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 MMP9P14780 707 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 DTYMKP23919 212 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 HLA-DRB3P79483 266 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 DGCR2P98153 550 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 PITPNAQ00169 270 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 KLRD1Q13241 179 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 GNMTQ14749 295 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 HMGN3Q15651 99 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 CR1LQ2VPA4 569 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 SPANXN2Q5MJ10 180 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 UTF1Q5T230 341 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 C6orf183Q5T699 404 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 METTL11BQ5VVY1 283 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 OR52W1Q6IF63 320 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 PYHIN1Q6K0P9 492 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 FAM53AQ6NSI3 398 aaPredicted RBP6.3□□□□□ -1.4
MSH6-211ENST00000606499 FAHD2BQ6P2I3 314 aaPredicted RBP6.3□□□□□ -1.4
MSH6-211ENST00000606499 MOB1BQ7L9L4 216 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 VMO1Q7Z5L0 202 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 MFSD4AQ8N468 514 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 C11orf42Q8N5U0 333 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 ZNF565Q8N9K5 539 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 OR52I2Q8NH67 350 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 OR1L1Q8NH94 360 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 RFESDQ8TAC1 157 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 IL1F10Q8WWZ1 152 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 SNAPC3Q92966 411 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 LEAP2Q969E1 77 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 ARL11Q969Q4 196 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 FAHD2AQ96GK7 314 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 TBX15Q96SF7 602 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 SOSTQ9BQB4 213 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 ST6GALNAC5Q9BVH7 336 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 TMPRSS13Q9BYE2 586 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 RIMS4Q9H426 269 aaPredicted RBP6.3□□□□□ -1.4
MSH6-211ENST00000606499 NCOR1P1Q9H4R4 102 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 TAF9BQ9HBM6 251 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 Q9N2K0 584 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 AKIP1Q9NQ31 210 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 IFT46Q9NQC8 304 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 SIRT7Q9NRC8 400 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 TAS2R3Q9NYW6 316 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 OPN4Q9UHM6 478 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 CUBNO60494 3623 aa6.3□□□□□ -1.4
MSH6-211ENST00000606499 ANK3Q12955 4377 aaKnown RBP6.29□□□□□ -1.4
MSH6-211ENST00000606499 IGHV3-43A0A0B4J1X8 118 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 IGKV1-6A0A0C4DH72 117 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 A0A1W2PPH5 198 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 NPIPB11E5RHQ5 1161 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 M0R1W7 72 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 SPINT2O43291 252 aa6.29□□□□□ -1.4
MSH6-211ENST00000606499 ORC5O43913 435 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms