RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 BOD1Q96IK1 185 aa10.03□□□□□ -0.8
HMGN3-AS1-201ENST00000604516 TMEM56Q96MV1 263 aa10.03□□□□□ -0.8
HMGN3-AS1-201ENST00000604516 IP6K3Q96PC2 410 aa10.03□□□□□ -0.8
HMGN3-AS1-201ENST00000604516 GP6Q9HCN6 339 aa10.03□□□□□ -0.8
HMGN3-AS1-201ENST00000604516 MPC1Q9Y5U8 109 aa10.03□□□□□ -0.8
HMGN3-AS1-201ENST00000604516 TMEM56-RWDD3S4R434 201 aa10.03□□□□□ -0.8
HMGN3-AS1-201ENST00000604516 AKAP13Q12802 2813 aa10.03□□□□□ -0.8
HMGN3-AS1-201ENST00000604516 NUDT19A8MXV4 375 aa10.03□□□□□ -0.8
HMGN3-AS1-201ENST00000604516 CDIPTO14735 213 aa10.03□□□□□ -0.8
HMGN3-AS1-201ENST00000604516 DEGS1O15121 323 aa10.03□□□□□ -0.8
HMGN3-AS1-201ENST00000604516 PGLYRP1O75594 196 aaPredicted RBP10.03□□□□□ -0.8
HMGN3-AS1-201ENST00000604516 TSPAN15O95858 294 aa10.03□□□□□ -0.8
HMGN3-AS1-201ENST00000604516 EPHA1P21709 976 aa10.03□□□□□ -0.8
HMGN3-AS1-201ENST00000604516 IGHV1-2P23083 117 aa10.03□□□□□ -0.8
HMGN3-AS1-201ENST00000604516 FAM76BQ5HYJ3 339 aa10.03□□□□□ -0.8
HMGN3-AS1-201ENST00000604516 ARV1Q9H2C2 271 aa10.03□□□□□ -0.8
HMGN3-AS1-201ENST00000604516 PTPRZ1P23471 2315 aaPredicted RBP10.02□□□□□ -0.8
HMGN3-AS1-201ENST00000604516 BORCS7-ASMTA0A0B4J1R7 106 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 A0A0G2JRQ6 117 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 PROB1E7EW31 1015 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 DANCRP0C864 163 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 SPP1P10451 314 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 TNFSF10P50591 281 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 TMEM182Q6ZP80 229 aaPredicted RBP10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 CXorf67Q86X51 503 aaPredicted RBP10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 SCCPDHQ8NBX0 429 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 FDCSPQ8NFU4 85 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 OR10J5Q8NHC4 309 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 TMEM171Q8WVE6 324 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 ABHD14AQ9BUJ0 271 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 ZDHHC11Q9H8X9 412 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 ROS1P08922 2347 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 SPAARA0A1B0GVQ0 90 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 OR5B21A6NL26 309 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 H0YL77 283 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 SNAPINO95295 136 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 GRPP07492 148 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 ZNF14P17017 642 aaPredicted RBP10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 CTRB1P17538 263 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 WT1P19544 449 aaPredicted RBP10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 CAMLGP49069 296 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 CEBPDP49716 269 aaPredicted RBP10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 IL24Q13007 206 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 CTRB2Q6GPI1 263 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 FAM122CQ6P4D5 195 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 CMTM1Q8IZ96 169 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 FAM185AQ8N0U4 392 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 SPAG16Q8N0X2 631 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 CNEP1R1Q8N9A8 125 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 PLPPR1Q8TBJ4 325 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 GINS3Q9BRX5 216 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 PIEZO2Q9H5I5 2752 aa10.02□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 DOCK11Q5JSL3 2073 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 FAM157AC9JC47 383 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 H3BP45 60 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 SMPD2O60906 423 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 AGFG2O95081 481 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 PPP1CBP62140 327 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 TBC1D28Q2M2D7 210 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 NMSQ5H8A3 153 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 ZNF324BQ6AW86 544 aaPredicted RBP10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 POM121Q96HA1 1249 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 TRIB1Q96RU8 372 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 ESRP2Q9H6T0 727 aaKnown RBP10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 DMXL2Q8TDJ6 3036 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 MEX3AA1L020 520 aaKnown RBP10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 CHST1O43916 411 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 TFF1P04155 84 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 SEC11BP0C7V7 166 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 PSG2P11465 335 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 PVALBP20472 110 aaPredicted RBP10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 DVL1P1P54792 670 aaPredicted RBP10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 ZNF154Q13106 437 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 Q6P435 159 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 ODF3L1Q8IXM7 274 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 TMEM178AQ8NBL3 297 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 DEFB124Q8NES8 71 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 SLC25A40Q8TBP6 338 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 NANOS1Q8WY41 292 aaKnown RBP10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 EIF5A2Q9GZV4 153 aaKnown RBP10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 PLK3Q9H4B4 646 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 C11orf1Q9H5F2 150 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 OPA3Q9H6K4 179 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 SPACA1Q9HBV2 294 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 GLRX2Q9NS18 164 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 CACFD1Q9UGQ2 172 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 OR2W1Q9Y3N9 320 aa10.01□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 TSPAN9O75954 239 aa10□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 OR2H2O95918 312 aa10□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 UCP1P25874 307 aa10□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 UBE2NP61088 152 aaKnown RBP10□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 SRPXP78539 464 aa10□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 SRSF7Q16629 238 aaKnown RBP eCLIP10□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 FAM53AQ6NSI3 398 aaPredicted RBP10□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 TMEM252Q8N6L7 170 aa10□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 OR5C1Q8NGR4 320 aa10□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 LYPD6BQ8NI32 183 aa10□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 FAM213BQ8TBF2 198 aa10□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 ZFP57Q9NU63 452 aa10□□□□□ -0.81
HMGN3-AS1-201ENST00000604516 FZR1Q9UM11 496 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms