RNA–Protein interactions for RNA: ENST00000603837.1

LINC01109-201, Transcript of long intergenic non-protein coding RNA 1109, humanhuman

BASIC

Gene LINC01109, Length 3,081 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01109-201ENST00000603837 MFSD1Q9H3U5 465 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 WIPI2Q9Y4P8 454 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 IGHV1-69-2A0A0G2JMI3 117 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 A0A1B0GV50 99 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 NPIPB5A8MRT5 1133 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 PLPP1O14494 284 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 PRH1P02810 166 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 CSN2P05814 226 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 PRLHRP49683 370 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 ZNF121P58317 390 aaPredicted RBP4.08□□□□□ -1.76
LINC01109-201ENST00000603837 PLP1P60201 277 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 CYCSP99999 105 aaKnown RBP4.08□□□□□ -1.76
LINC01109-201ENST00000603837 LAMTOR4Q0VGL1 99 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 ACOT6Q3I5F7 207 aaPredicted RBP4.08□□□□□ -1.76
LINC01109-201ENST00000603837 FAM71E1Q6IPT2 247 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 FAM71F2Q6NXP2 309 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 ANKRD16Q6P6B7 361 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 SLC23A3Q6PIS1 610 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 FAM159AQ6UWV7 190 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 Q7L0L9 218 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 C9orf40Q8IXQ3 194 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 B3GALNT2Q8NCR0 500 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 GPR32P1Q8NGA4 272 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 OR6T1Q8NGN1 323 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 VN1R17PQ8TDU5 208 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 SUSD6Q92537 303 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 NPIPB3Q92617 1050 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 MACROD1Q9BQ69 325 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 NAA38Q9BRA0 125 aaKnown RBP4.08□□□□□ -1.76
LINC01109-201ENST00000603837 CIPCQ9C0C6 399 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 SYNPO2LQ9H987 977 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 GCM1Q9NP62 436 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 TMEM106BQ9NUM4 274 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 MARCH2Q9P0N8 246 aa4.08□□□□□ -1.76
LINC01109-201ENST00000603837 PATJQ8NI35 1801 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 TICRRQ7Z2Z1 1910 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 CKAP5Q14008 2032 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 A0A1B0GW64 132 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 LRP5LA4QPB2 252 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 MEIS3P1A6NDR6 274 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 C17orf100A8MU93 164 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 H0YIZ8 118 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 ETV2O00321 342 aaPredicted RBP4.07□□□□□ -1.76
LINC01109-201ENST00000603837 SLC16A7O60669 478 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 CDS2O95674 445 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 SEMA4FO95754 770 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 CD3DP04234 171 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 HLA-DQB2P05538 268 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 TACR1P25103 407 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 GLRXP35754 106 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 KIR2DS4P43632 304 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 TAS2R43P59537 309 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 PAFAH1B2P68402 229 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 SRPXP78539 464 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 LRRC75BQ2VPJ9 315 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 LINC01620Q4KN68 170 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 SPATA45Q537H7 98 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 DPPA3Q6W0C5 159 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 TPRG1Q6ZUI0 275 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 MTURNQ8N3F0 131 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 OR51A2Q8NGJ7 313 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 OR10S1Q8NGN2 331 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 OR2Y1Q8NGV0 311 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 MRAPQ8TCY5 172 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 TMEM37Q8WXS4 190 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 NEIL2Q969S2 332 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 RARRES2Q99969 163 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 C16orf70Q9BSU1 422 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 KATNBL1Q9H079 304 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 OR51I1Q9H343 314 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 ZNF581Q9P0T4 197 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 TRIOO75962 3097 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 A0A087WV48 116 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 IGKV6-21A0A0C4DH24 114 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 CENPVL1A0A0U1RR11 272 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 CENPVL3A0A0U1RRI6 287 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 LOC100996750A0A140TA64 210 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 DAPL1A0PJW8 107 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 SERINC4A6NH21 518 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 B5MCH6 92 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 ZNF878C9JN71 531 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 FFAR1O14842 300 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 HCRTR1O43613 425 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 EFNA2O43921 213 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 YPEL1O60688 119 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 HAND1O96004 215 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 CA1P00915 261 aaPredicted RBP4.07□□□□□ -1.76
LINC01109-201ENST00000603837 HLA-HP01893 362 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 SP9P0CG40 484 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 GABRA3P34903 492 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 ACVRL1P37023 503 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 LIM2P55344 173 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 HLA-DRB3P79483 266 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 FOXL1Q12952 345 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 PPP1R1AQ13522 171 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 ACKR1Q16570 336 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 MPV17LQ2QL34 196 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 HLA-BQ31612 363 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 ZNF260Q3ZCT1 412 aa4.07□□□□□ -1.76
LINC01109-201ENST00000603837 TCEAL5Q5H9L2 206 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms