RNA–Protein interactions for RNA: ENST00000603232.6

CELF4-223, Transcript of CUGBP Elav-like family member 4, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF4, Length 1,906 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-223	ENST00000603232	hCG_1809904	A0A1W2PP81	198 aa		13.2	□□□□□ -0.3
CELF4-223	ENST00000603232		A0A1W2PR64	198 aa		13.2	□□□□□ -0.3
CELF4-223	ENST00000603232		A0A1W2PRV1	198 aa		13.2	□□□□□ -0.3
CELF4-223	ENST00000603232	BTBD17	A6NE02	478 aa		13.2	□□□□□ -0.3
CELF4-223	ENST00000603232	AP4M1	O00189	453 aa		13.2	□□□□□ -0.3
CELF4-223	ENST00000603232	PHF1	O43189	567 aa	Predicted RBP	13.2	□□□□□ -0.3
CELF4-223	ENST00000603232	PITX3	O75364	302 aa		13.2	□□□□□ -0.3
CELF4-223	ENST00000603232	AADAC	P22760	399 aa		13.2	□□□□□ -0.3
CELF4-223	ENST00000603232	MEOX1	P50221	254 aa		13.2	□□□□□ -0.3
CELF4-223	ENST00000603232	CLDN15	P56746	228 aa		13.2	□□□□□ -0.3
CELF4-223	ENST00000603232	EWSR1	Q01844	656 aa	Known RBP eCLIP	13.2	□□□□□ -0.3
CELF4-223	ENST00000603232	ZNF92	Q03936	586 aa		13.2	□□□□□ -0.3
CELF4-223	ENST00000603232	ZNF616	Q08AN1	781 aa		13.2	□□□□□ -0.3
CELF4-223	ENST00000603232	DAZAP2	Q15038	168 aa	Predicted RBP	13.2	□□□□□ -0.3
CELF4-223	ENST00000603232	OR2C3	Q8N628	320 aa		13.2	□□□□□ -0.3
CELF4-223	ENST00000603232	SLC35G3	Q8N808	338 aa		13.2	□□□□□ -0.3
CELF4-223	ENST00000603232	OR2M7	Q8NG81	312 aa		13.2	□□□□□ -0.3
CELF4-223	ENST00000603232	OR5L1	Q8NGL2	311 aa		13.2	□□□□□ -0.3
CELF4-223	ENST00000603232	TRAV20	A0A0B4J274	112 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	TRAV17	A0A0B4J275	112 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	LRRC3C	A6NJW4	275 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	RPL36A-HNRNPH2	H7BZ11	118 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	MMP7	P09237	267 aa	Predicted RBP	13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	RFPL3S	P0C7P2	107 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	B4GALT1	P15291	398 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	TSPO2	Q5TGU0	170 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	SP5	Q6BEB4	398 aa	Predicted RBP	13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	CLEC9A	Q6UXN8	241 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	AKR7L	Q8NHP1	331 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	TMEM45B	Q96B21	275 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	TP53RK	Q96S44	253 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	EIF5A2	Q9GZV4	153 aa	Known RBP	13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	SVIL	O95425	2214 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	ZNF407	Q9C0G0	2248 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	ZNF14	P17017	642 aa	Predicted RBP	13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	SULT1A1	P50225	295 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	NHLH2	Q02577	135 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	FOXO1	Q12778	655 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	IGSF11	Q5DX21	431 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	RNFT1	Q5M7Z0	435 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232		Q8NA96	180 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	OR11L1	Q8NGX0	322 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	TCTEX1D2	Q8WW35	142 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	DYRK2	Q92630	601 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	GPR35	Q9HC97	309 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	KCNJ16	Q9NPI9	418 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	PARPBP	Q9NWS1	579 aa		13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	KLF13	Q9Y2Y9	288 aa	Predicted RBP	13.19	□□□□□ -0.3
CELF4-223	ENST00000603232	SHANK1	Q9Y566	2161 aa		13.18	□□□□□ -0.3
CELF4-223	ENST00000603232	PIGBOS1	A0A0B4J2F0	54 aa		13.18	□□□□□ -0.3
CELF4-223	ENST00000603232	FAM166B	A8MTA8	275 aa		13.18	□□□□□ -0.3
CELF4-223	ENST00000603232	CYTIP	O60759	359 aa		13.18	□□□□□ -0.3
CELF4-223	ENST00000603232	WISP2	O76076	250 aa		13.18	□□□□□ -0.3
CELF4-223	ENST00000603232	NAPSA	O96009	420 aa		13.18	□□□□□ -0.3
CELF4-223	ENST00000603232	PRH1	P02810	166 aa		13.18	□□□□□ -0.3
CELF4-223	ENST00000603232	NQO2	P16083	231 aa		13.18	□□□□□ -0.3
CELF4-223	ENST00000603232	GNRHR	P30968	328 aa		13.18	□□□□□ -0.3
CELF4-223	ENST00000603232	FHIT	P49789	147 aa		13.18	□□□□□ -0.3
CELF4-223	ENST00000603232	CEACAM16	Q2WEN9	425 aa		13.18	□□□□□ -0.3
CELF4-223	ENST00000603232	KRBOX4	Q5JUW0	171 aa		13.18	□□□□□ -0.3
CELF4-223	ENST00000603232	PLCXD3	Q63HM9	321 aa		13.18	□□□□□ -0.3
CELF4-223	ENST00000603232	FAM24B	Q8N5W8	94 aa		13.18	□□□□□ -0.3
CELF4-223	ENST00000603232	TMEM178A	Q8NBL3	297 aa		13.18	□□□□□ -0.3
CELF4-223	ENST00000603232	OR2V1	Q8NHB1	315 aa		13.18	□□□□□ -0.3
CELF4-223	ENST00000603232	ALKBH3	Q96Q83	286 aa	Predicted RBP	13.18	□□□□□ -0.3
CELF4-223	ENST00000603232	FAM173A	Q9BQD7	235 aa		13.18	□□□□□ -0.3
CELF4-223	ENST00000603232	SLC25A31	Q9H0C2	315 aa		13.18	□□□□□ -0.3
CELF4-223	ENST00000603232	PLEKHF2	Q9H8W4	249 aa		13.18	□□□□□ -0.3
CELF4-223	ENST00000603232	UNKL	Q9H9P5	680 aa	Known RBP	13.18	□□□□□ -0.3
CELF4-223	ENST00000603232	LYRM2	Q9NU23	88 aa	Predicted RBP	13.18	□□□□□ -0.3
CELF4-223	ENST00000603232	DNAJC13	O75165	2243 aa		13.18	□□□□□ -0.3
CELF4-223	ENST00000603232	EDN3	P14138	238 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	NKX2-1	P43699	371 aa	Predicted RBP	13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	BAX	Q07812	192 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	CLINT1	Q14677	625 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	DPPA2	Q7Z7J5	298 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	ZNF611	Q8N823	705 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	OR14L1P	Q8NHC6	308 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	GTF3A	Q92664	365 aa	Known RBP	13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	IL22RA2	Q969J5	263 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	TAAR6	Q96RI8	345 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	C20orf24	Q9BUV8	137 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	SH3BGRL3	Q9H299	93 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	TMPRSS5	Q9H3S3	457 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	ZNF442	Q9H7R0	627 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232		A0A1W2PPE2	198 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	ZNF732	B4DXR9	585 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232		M0R036	132 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	TUSC2	O75896	110 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	ARG1	P05089	322 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	CELA3A	P09093	270 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	CTXN2	P0C2S0	81 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	PRR30	Q53SZ7	412 aa	Predicted RBP	13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	HEPN1	Q6WQI6	88 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	CALHM1	Q8IU99	346 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	PIGC	Q92535	297 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	CPNE4	Q96A23	557 aa	Predicted RBP	13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	PAPOLG	Q9BWT3	736 aa	Known RBP	13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	TTTY12	Q9BZ98	90 aa		13.17	□□□□□ -0.3
CELF4-223	ENST00000603232	LINC00470	Q9BZP3	86 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms