RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 TOMM40LQ969M1 308 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 MUL1Q969V5 352 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 DERL3Q96Q80 235 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 UQCC2Q9BRT2 126 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 SLC25A33Q9BSK2 321 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 WNT10AQ9GZT5 417 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 PSG11Q9UQ72 335 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 TPRKBQ9Y3C4 175 aa12.54□□□□□ -0.4
IRF3-226ENST00000600453 PTGES3LE9PB15 166 aa12.53□□□□□ -0.4
IRF3-226ENST00000600453 CA11O75493 328 aa12.53□□□□□ -0.4
IRF3-226ENST00000600453 GPR50Q13585 617 aa12.53□□□□□ -0.4
IRF3-226ENST00000600453 HABP2Q14520 560 aaPredicted RBP12.53□□□□□ -0.4
IRF3-226ENST00000600453 Q3ZCU0 254 aa12.53□□□□□ -0.4
IRF3-226ENST00000600453 CENPVQ7Z7K6 275 aaPredicted RBP12.53□□□□□ -0.4
IRF3-226ENST00000600453 NDUFA11Q86Y39 141 aa12.53□□□□□ -0.4
IRF3-226ENST00000600453 OR8H3Q8N146 312 aa12.53□□□□□ -0.4
IRF3-226ENST00000600453 OR10X1Q8NGY0 326 aa12.53□□□□□ -0.4
IRF3-226ENST00000600453 ARL11Q969Q4 196 aa12.53□□□□□ -0.4
IRF3-226ENST00000600453 OCSTAMPQ9BR26 566 aa12.53□□□□□ -0.4
IRF3-226ENST00000600453 VCX3BQ9H321 246 aa12.53□□□□□ -0.4
IRF3-226ENST00000600453 NOTCH1P46531 2555 aa12.52□□□□□ -0.4
IRF3-226ENST00000600453 MT-ND4P03905 459 aa12.52□□□□□ -0.41
IRF3-226ENST00000600453 OPN1MWP04001 364 aa12.52□□□□□ -0.41
IRF3-226ENST00000600453 OPN1MW2P0DN77 364 aa12.52□□□□□ -0.41
IRF3-226ENST00000600453 OPN1MW3P0DN78 364 aa12.52□□□□□ -0.41
IRF3-226ENST00000600453 CD24P25063 80 aa12.52□□□□□ -0.41
IRF3-226ENST00000600453 LTC4SQ16873 150 aa12.52□□□□□ -0.41
IRF3-226ENST00000600453 TMEM30BQ3MIR4 351 aa12.52□□□□□ -0.41
IRF3-226ENST00000600453 ACSM3Q53FZ2 586 aa12.52□□□□□ -0.41
IRF3-226ENST00000600453 PDLIM3Q53GG5 364 aaPredicted RBP12.52□□□□□ -0.41
IRF3-226ENST00000600453 GLT8D1Q68CQ7 371 aa12.52□□□□□ -0.41
IRF3-226ENST00000600453 TRAT1Q6PIZ9 186 aa12.52□□□□□ -0.41
IRF3-226ENST00000600453 ZNF497Q6ZNH5 498 aa12.52□□□□□ -0.41
IRF3-226ENST00000600453 C8orf31Q8N9H6 132 aa12.52□□□□□ -0.41
IRF3-226ENST00000600453 OR4F17Q8NGA8 305 aa12.52□□□□□ -0.41
IRF3-226ENST00000600453 OR4F4Q96R69 305 aa12.52□□□□□ -0.41
IRF3-226ENST00000600453 CST11Q9H112 138 aa12.52□□□□□ -0.41
IRF3-226ENST00000600453 VWFP04275 2813 aa12.52□□□□□ -0.41
IRF3-226ENST00000600453 MEGF8Q7Z7M0 2845 aa12.52□□□□□ -0.41
IRF3-226ENST00000600453 FAM90A9PA6NNJ1 464 aa12.51□□□□□ -0.41
IRF3-226ENST00000600453 AIPO00170 330 aa12.51□□□□□ -0.41
IRF3-226ENST00000600453 SPINT2O43291 252 aa12.51□□□□□ -0.41
IRF3-226ENST00000600453 KCNAB3O43448 404 aa12.51□□□□□ -0.41
IRF3-226ENST00000600453 CRTAPO75718 401 aaPredicted RBP12.51□□□□□ -0.41
IRF3-226ENST00000600453 GAPDHP04406 335 aaKnown RBP12.51□□□□□ -0.41
IRF3-226ENST00000600453 LPLP06858 475 aa12.51□□□□□ -0.41
IRF3-226ENST00000600453 UBBP0CG47 229 aa12.51□□□□□ -0.41
IRF3-226ENST00000600453 FUT3P21217 361 aa12.51□□□□□ -0.41
IRF3-226ENST00000600453 SSTR5P35346 364 aa12.51□□□□□ -0.41
IRF3-226ENST00000600453 SPHARQ15513 63 aa12.51□□□□□ -0.41
IRF3-226ENST00000600453 C6orf183Q5T699 404 aa12.51□□□□□ -0.41
IRF3-226ENST00000600453 RAB12Q6IQ22 244 aa12.51□□□□□ -0.41
IRF3-226ENST00000600453 UNQ9370/PRO34162Q6UXP9 181 aa12.51□□□□□ -0.41
IRF3-226ENST00000600453 OR5AU1Q8NGC0 362 aa12.51□□□□□ -0.41
IRF3-226ENST00000600453 WIPF2Q8TF74 440 aaPredicted RBP12.51□□□□□ -0.41
IRF3-226ENST00000600453 PHYHIPQ92561 330 aa12.51□□□□□ -0.41
IRF3-226ENST00000600453 OR5M11Q96RB7 305 aa12.51□□□□□ -0.41
IRF3-226ENST00000600453 SELENOIQ9C0D9 397 aa12.51□□□□□ -0.41
IRF3-226ENST00000600453 ETAA1Q9NY74 926 aa12.51□□□□□ -0.41
IRF3-226ENST00000600453 RCC2Q9P258 522 aaKnown RBP12.51□□□□□ -0.41
IRF3-226ENST00000600453 TRAPPC2LQ9UL33 140 aa12.51□□□□□ -0.41
IRF3-226ENST00000600453 PEX16Q9Y5Y5 336 aa12.51□□□□□ -0.41
IRF3-226ENST00000600453 A0A1W2PP11 408 aa12.5□□□□□ -0.41
IRF3-226ENST00000600453 MAGEA13PA6NCF6 341 aa12.5□□□□□ -0.41
IRF3-226ENST00000600453 C15orf65H3BRN8 121 aa12.5□□□□□ -0.41
IRF3-226ENST00000600453 SDCBPO00560 298 aaPredicted RBP12.5□□□□□ -0.41
IRF3-226ENST00000600453 PIN1P1O15428 100 aa12.5□□□□□ -0.41
IRF3-226ENST00000600453 CD28P10747 220 aa12.5□□□□□ -0.41
IRF3-226ENST00000600453 MGMTP16455 207 aa12.5□□□□□ -0.41
IRF3-226ENST00000600453 IL3RAP26951 378 aa12.5□□□□□ -0.41
IRF3-226ENST00000600453 RANBP1P43487 201 aa12.5□□□□□ -0.41
IRF3-226ENST00000600453 GNG10P50151 68 aa12.5□□□□□ -0.41
IRF3-226ENST00000600453 HES1Q14469 280 aa12.5□□□□□ -0.41
IRF3-226ENST00000600453 MED22Q15528 200 aa12.5□□□□□ -0.41
IRF3-226ENST00000600453 NSUN5P1Q3KNT7 163 aa12.5□□□□□ -0.41
IRF3-226ENST00000600453 ABCA11PQ4W5N1 156 aa12.5□□□□□ -0.41
IRF3-226ENST00000600453 Q6ZS46 218 aa12.5□□□□□ -0.41
IRF3-226ENST00000600453 LINC00311Q8N616 119 aa12.5□□□□□ -0.41
IRF3-226ENST00000600453 CCDC107Q8WV48 283 aa12.5□□□□□ -0.41
IRF3-226ENST00000600453 NKX1-2Q9UD57 310 aaPredicted RBP12.5□□□□□ -0.41
IRF3-226ENST00000600453 MOB4Q9Y3A3 225 aa12.5□□□□□ -0.41
IRF3-226ENST00000600453 TRAV39A0A0B4J263 110 aa12.49□□□□□ -0.41
IRF3-226ENST00000600453 CCRL2O00421 344 aa12.49□□□□□ -0.41
IRF3-226ENST00000600453 IGHV3-7P01780 117 aa12.49□□□□□ -0.41
IRF3-226ENST00000600453 SRMP19623 302 aa12.49□□□□□ -0.41
IRF3-226ENST00000600453 ZNF816Q0VGE8 651 aaPredicted RBP12.49□□□□□ -0.41
IRF3-226ENST00000600453 TRAM1Q15629 374 aa12.49□□□□□ -0.41
IRF3-226ENST00000600453 SYT6Q5T7P8 510 aaPredicted RBP12.49□□□□□ -0.41
IRF3-226ENST00000600453 STEAP3Q658P3 488 aa12.49□□□□□ -0.41
IRF3-226ENST00000600453 ZNF554Q86TJ5 538 aa12.49□□□□□ -0.41
IRF3-226ENST00000600453 LYPD6Q86Y78 171 aa12.49□□□□□ -0.41
IRF3-226ENST00000600453 DRAM1Q8N682 238 aa12.49□□□□□ -0.41
IRF3-226ENST00000600453 LEAP2Q969E1 77 aa12.49□□□□□ -0.41
IRF3-226ENST00000600453 BANF2Q9H503 90 aa12.49□□□□□ -0.41
IRF3-226ENST00000600453 GFOD1Q9NXC2 390 aa12.49□□□□□ -0.41
IRF3-226ENST00000600453 KCNIP1Q9NZI2 227 aa12.49□□□□□ -0.41
IRF3-226ENST00000600453 ZNF581Q9P0T4 197 aa12.49□□□□□ -0.41
IRF3-226ENST00000600453 LRRC42Q9Y546 428 aa12.49□□□□□ -0.41
IRF3-226ENST00000600453 FGF16O43320 207 aa12.48□□□□□ -0.41
IRF3-226ENST00000600453 SNRNP70P08621 437 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms