RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 GLYATL2Q8WU03 294 aa9.87□□□□□ -0.83
ARHGEF1-220ENST00000600274 TMEM45BQ96B21 275 aa9.87□□□□□ -0.83
ARHGEF1-220ENST00000600274 CYTL1Q9NRR1 136 aa9.87□□□□□ -0.83
ARHGEF1-220ENST00000600274 ZNF391Q9UJN7 358 aa9.87□□□□□ -0.83
ARHGEF1-220ENST00000600274 RNF150Q9ULK6 438 aa9.87□□□□□ -0.83
ARHGEF1-220ENST00000600274 HSF4Q9ULV5 492 aa9.87□□□□□ -0.83
ARHGEF1-220ENST00000600274 ATMQ13315 3056 aa9.87□□□□□ -0.83
ARHGEF1-220ENST00000600274 IGKV3D-15A0A087WSY6 115 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 FAM24AA6NFZ4 105 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 FIP1L1Q6UN15 594 aaKnown RBP9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 LGI3Q8N145 548 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 WDYHV1Q96HA8 205 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 MED9Q9NWA0 146 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 ERRFI1Q9UJM3 462 aaPredicted RBP9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 TRAPPC2LQ9UL33 140 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 C3orf85A0A1B0GTC6 90 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 WDR1O75083 606 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 OR8U9P0C7N5 309 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 HOXA1P49639 335 aaPredicted RBP9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 GNMTQ14749 295 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 TBC1D28Q2M2D7 210 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 C20orf204Q6ZNR8 217 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 ZNF818PQ6ZRF7 136 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 FAM58AQ8N1B3 248 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 TPRX1Q8N7U7 411 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 CCDC71LQ8N9Z2 235 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 NANOS1Q8WY41 292 aaKnown RBP9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 ZNF292O60281 2723 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 KIAA1549Q9HCM3 1950 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 PQLC2LA1A4F0 135 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 ADAM20O43506 726 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 LPAR6P43657 344 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 VAMP2P63027 116 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 TMEM187Q14656 261 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 SURF2Q15527 256 aaPredicted RBP9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 LIAT1Q6ZQX7 453 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 OR4A4PQ8NGN8 299 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 OR1K1Q8NGR3 316 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 OR8U1Q8NH10 309 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 FAM213BQ8TBF2 198 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 MSL2Q9HCI7 577 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 SMCO4Q9NRQ5 59 aa9.86□□□□□ -0.83
ARHGEF1-220ENST00000600274 H0YL77 283 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 RPL36A-HNRNPH2H7BZ11 118 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 G0S2P27469 103 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 GNG3P63215 75 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 VWA1Q6PCB0 445 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 MDS2Q8NDY4 140 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 SLC25A40Q8TBP6 338 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 IP6K3Q96PC2 410 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 NRIP2Q9BQI9 281 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 PARD6AQ9NPB6 346 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 KCNJ16Q9NPI9 418 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 SH3BGRL2Q9UJC5 107 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 ADGRG4Q8IZF6 3080 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 H7C1Q1 480 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 MPPED1O15442 326 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 IGHV3-13P01766 116 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 IGHV3-7P01780 117 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 NDUFA6P56556 154 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 FGF12P61328 243 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 CXorf66Q5JRM2 361 aaPredicted RBP9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 ZFP62Q8NB50 900 aaPredicted RBP9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 SH3BGRL3Q9H299 93 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 OR1A1Q9P1Q5 309 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 DUSP13Q9UII6 198 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 MRPS18CQ9Y3D5 142 aaKnown RBP9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 ST8SIA3O43173 380 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 TNFSF10P50591 281 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 PPP1CBP62140 327 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 TGFBR3Q03167 851 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 SRSF4Q08170 494 aaKnown RBP9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 LINC00470Q9BZP3 86 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 FAM117AQ9C073 453 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 PRO1933Q9H354 126 aa9.85□□□□□ -0.83
ARHGEF1-220ENST00000600274 A0A1B0GV90 55 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 A0A1W2PPE2 198 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 WNT9BO14905 357 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 DEDDO75618 318 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 TUSC2O75896 110 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 PTAFRP25105 342 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 EIF5AP63241 154 aaKnown RBP9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 MIDNQ504T8 468 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 FAM53AQ6NSI3 398 aaPredicted RBP9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 TMEM182Q6ZP80 229 aaPredicted RBP9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 LRP11Q86VZ4 500 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 ZNF573Q86YE8 665 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 ZNF808Q8N4W9 903 aaPredicted RBP9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 OR10J5Q8NHC4 309 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 MOB3AQ96BX8 217 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 NTNG2Q96CW9 530 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 SUCNR1Q9BXA5 334 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 CEACAM18A8MTB9 384 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 PROB1E7EW31 1015 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 SERPINE2P07093 398 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 RPS16P62249 146 aaKnown RBP9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 ZNF674Q2M3X9 581 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 C4orf17Q53FE4 359 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 TMEM211Q6ICI0 200 aa9.84□□□□□ -0.83
ARHGEF1-220ENST00000600274 CMTM1Q8IZ96 169 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 316.3 ms