RNA–Protein interactions for RNA: ENST00000600022.5

IRF3-225, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-225ENST00000600022 C11orf53Q8IXP5 236 aa11.23□□□□□ -0.61
IRF3-225ENST00000600022 OSR2Q8N2R0 312 aa11.23□□□□□ -0.61
IRF3-225ENST00000600022 PNKDQ8N490 385 aa11.23□□□□□ -0.61
IRF3-225ENST00000600022 TMEM104Q8NE00 496 aa11.23□□□□□ -0.61
IRF3-225ENST00000600022 OR10K1Q8NGX5 313 aa11.23□□□□□ -0.61
IRF3-225ENST00000600022 DYRK2Q92630 601 aa11.23□□□□□ -0.61
IRF3-225ENST00000600022 ERGIC1Q969X5 290 aa11.23□□□□□ -0.61
IRF3-225ENST00000600022 TM2D1Q9BX74 207 aa11.23□□□□□ -0.61
IRF3-225ENST00000600022 PKIBQ9C010 78 aa11.23□□□□□ -0.61
IRF3-225ENST00000600022 C11orf54Q9H0W9 315 aaPredicted RBP11.23□□□□□ -0.61
IRF3-225ENST00000600022 FN3KRPQ9HA64 309 aa11.23□□□□□ -0.61
IRF3-225ENST00000600022 IFT46Q9NQC8 304 aa11.23□□□□□ -0.61
IRF3-225ENST00000600022 RBFOX1Q9NWB1 397 aaKnown RBP11.23□□□□□ -0.61
IRF3-225ENST00000600022 COPZ2Q9P299 210 aa11.23□□□□□ -0.61
IRF3-225ENST00000600022 OOEPA6NGQ2 149 aa11.22□□□□□ -0.61
IRF3-225ENST00000600022 J3QT63 122 aa11.22□□□□□ -0.61
IRF3-225ENST00000600022 RAB27BO00194 218 aa11.22□□□□□ -0.61
IRF3-225ENST00000600022 TIMM23O14925 209 aa11.22□□□□□ -0.61
IRF3-225ENST00000600022 AKR7A2O43488 359 aa11.22□□□□□ -0.61
IRF3-225ENST00000600022 ORC5O43913 435 aa11.22□□□□□ -0.61
IRF3-225ENST00000600022 LHBP01229 141 aa11.22□□□□□ -0.61
IRF3-225ENST00000600022 TFF1P04155 84 aa11.22□□□□□ -0.61
IRF3-225ENST00000600022 LIPFP07098 398 aa11.22□□□□□ -0.61
IRF3-225ENST00000600022 AMY2BP19961 511 aa11.22□□□□□ -0.61
IRF3-225ENST00000600022 BLVRBP30043 206 aaPredicted RBP11.22□□□□□ -0.61
IRF3-225ENST00000600022 RCVRNP35243 200 aa11.22□□□□□ -0.61
IRF3-225ENST00000600022 CBX5P45973 191 aa11.22□□□□□ -0.61
IRF3-225ENST00000600022 NPY4RP50391 375 aa11.22□□□□□ -0.61
IRF3-225ENST00000600022 ARFRP1Q13795 201 aa11.22□□□□□ -0.61
IRF3-225ENST00000600022 METTL11BQ5VVY1 283 aa11.22□□□□□ -0.61
IRF3-225ENST00000600022 HAGHLQ6PII5 290 aaPredicted RBP11.22□□□□□ -0.61
IRF3-225ENST00000600022 PLET1Q6UQ28 207 aa11.22□□□□□ -0.61
IRF3-225ENST00000600022 CCBE1Q6UXH8 406 aaPredicted RBP11.22□□□□□ -0.61
IRF3-225ENST00000600022 NBEAL2Q6ZNJ1 2754 aa11.22□□□□□ -0.61
IRF3-225ENST00000600022 CALHM1Q8IU99 346 aa11.22□□□□□ -0.61
IRF3-225ENST00000600022 Q8IYB0 196 aa11.22□□□□□ -0.61
IRF3-225ENST00000600022 NEDD4LQ96PU5 975 aa11.22□□□□□ -0.61
IRF3-225ENST00000600022 CCL13Q99616 98 aa11.22□□□□□ -0.61
IRF3-225ENST00000600022 TLNRD1Q9H1K6 362 aa11.22□□□□□ -0.61
IRF3-225ENST00000600022 OR51I2Q9H344 312 aa11.22□□□□□ -0.61
IRF3-225ENST00000600022 MTFP1Q9UDX5 166 aa11.22□□□□□ -0.61
IRF3-225ENST00000600022 RBMX2Q9Y388 322 aaKnown RBP11.22□□□□□ -0.61
IRF3-225ENST00000600022 hCG_2014768A0A024R1R8 64 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 FAM90A10PA6NDY2 464 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 FAM90A18PA6NE21 464 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 FAM90A16PA6NEW6 464 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 TMEM235A6NFC5 223 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 FAM90A20PA6NIJ5 464 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 FAM90A8PA6NJQ4 464 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 FAM90A7PA6NKC0 464 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 SERPINE3A8MV23 424 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 FAM90A22PA8MWA6 464 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 FAM90A12PA8MX19 464 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 FAM90A5PA8MXJ8 464 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 FAM90A23PA8MXZ1 464 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 PRB2P02812 416 aaPredicted RBP11.21□□□□□ -0.61
IRF3-225ENST00000600022 FAM90A15PP0C7V4 464 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 FAM90A13PP0C7W8 464 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 FAM90A14PP0C7W9 464 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 FAM90A24PP0C7X0 464 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 HIST1H1DP16402 221 aaKnown RBP11.21□□□□□ -0.61
IRF3-225ENST00000600022 GABRR1P24046 479 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 TAS2R19P59542 299 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 IL24Q13007 206 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 GDPD3Q7L5L3 318 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 VMO1Q7Z5L0 202 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 NRARPQ7Z6K4 114 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 TRAPPC6BQ86SZ2 158 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 LINC00596Q86U02 117 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 FAM89BQ8N5H3 189 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 SCCPDHQ8NBX0 429 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 ST8SIA4Q92187 359 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 AQP3Q92482 292 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 Q96M66 194 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 DPAGT1Q9H3H5 408 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 PLEKHJ1Q9NW61 149 aa11.21□□□□□ -0.61
IRF3-225ENST00000600022 ZNF107Q9UII5 783 aaPredicted RBP11.21□□□□□ -0.61
IRF3-225ENST00000600022 RPUSD1Q9UJJ7 312 aaKnown RBP11.21□□□□□ -0.61
IRF3-225ENST00000600022 TRAV38-1A0A0B4J264 116 aa11.2□□□□□ -0.62
IRF3-225ENST00000600022 IGKV1-12A0A0C4DH73 117 aa11.2□□□□□ -0.62
IRF3-225ENST00000600022 A0A1W2PP11 408 aa11.2□□□□□ -0.62
IRF3-225ENST00000600022 ANKRD20A5PA0PJZ0 165 aa11.2□□□□□ -0.62
IRF3-225ENST00000600022 A6NLC8 198 aa11.2□□□□□ -0.62
IRF3-225ENST00000600022 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.2□□□□□ -0.62
IRF3-225ENST00000600022 PLA2G10O15496 165 aa11.2□□□□□ -0.62
IRF3-225ENST00000600022 LANCL1O43813 399 aa11.2□□□□□ -0.62
IRF3-225ENST00000600022 IGKV1D-12P01611 117 aa11.2□□□□□ -0.62
IRF3-225ENST00000600022 AKAIN1P0CW23 69 aa11.2□□□□□ -0.62
IRF3-225ENST00000600022 SELLP14151 372 aa11.2□□□□□ -0.62
IRF3-225ENST00000600022 GNB3P16520 340 aa11.2□□□□□ -0.62
IRF3-225ENST00000600022 KLRD1Q13241 179 aa11.2□□□□□ -0.62
IRF3-225ENST00000600022 KLF9Q13886 244 aaPredicted RBP11.2□□□□□ -0.62
IRF3-225ENST00000600022 PDCD1Q15116 288 aa11.2□□□□□ -0.62
IRF3-225ENST00000600022 MOGAT2Q3SYC2 334 aa11.2□□□□□ -0.62
IRF3-225ENST00000600022 ZNF260Q3ZCT1 412 aa11.2□□□□□ -0.62
IRF3-225ENST00000600022 ELP2Q6IA86 826 aa11.2□□□□□ -0.62
IRF3-225ENST00000600022 LDLRAD3Q86YD5 345 aa11.2□□□□□ -0.62
IRF3-225ENST00000600022 Q8N7P7 452 aa11.2□□□□□ -0.62
IRF3-225ENST00000600022 OR5T2Q8NGG2 359 aa11.2□□□□□ -0.62
IRF3-225ENST00000600022 GPX8Q8TED1 209 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms