RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 AMY2AP04746 511 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 CDK1P06493 297 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 FAM90A15PP0C7V4 464 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 FAM90A13PP0C7W8 464 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 FAM90A14PP0C7W9 464 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 FAM90A24PP0C7X0 464 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 FAM106CPP0CH98 169 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 OPN1MW2P0DN77 364 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 OPN1MW3P0DN78 364 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 SSTR5P35346 364 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 DIAPH2-AS1Q14236 149 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 TMEM95Q3KNT9 176 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 ABCA11PQ4W5N1 156 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 C6orf141Q5SZD1 244 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 RNLSQ5VYX0 342 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 UNQ9370/PRO34162Q6UXP9 181 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 CENPVQ7Z7K6 275 aaPredicted RBP12.03□□□□□ -0.48
LIG1-215ENST00000597901 C1QL4Q86Z23 238 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 OR5AU1Q8NGC0 362 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 ARL11Q969Q4 196 aa12.03□□□□□ -0.48
LIG1-215ENST00000597901 A0A1W2PPE3 182 aa12.02□□□□□ -0.49
LIG1-215ENST00000597901 ADARB2-AS1A8MUL3 147 aa12.02□□□□□ -0.49
LIG1-215ENST00000597901 MCRIP1C9JLW8 97 aa12.02□□□□□ -0.49
LIG1-215ENST00000597901 C15orf65H3BRN8 121 aa12.02□□□□□ -0.49
LIG1-215ENST00000597901 ORC5O43913 435 aa12.02□□□□□ -0.49
LIG1-215ENST00000597901 GNG10P50151 68 aa12.02□□□□□ -0.49
LIG1-215ENST00000597901 MADCAM1Q13477 382 aa12.02□□□□□ -0.49
LIG1-215ENST00000597901 ACSM3Q53FZ2 586 aa12.02□□□□□ -0.49
LIG1-215ENST00000597901 ZNF497Q6ZNH5 498 aa12.02□□□□□ -0.49
LIG1-215ENST00000597901 NDUFA11Q86Y39 141 aa12.02□□□□□ -0.49
LIG1-215ENST00000597901 NEK7Q8TDX7 302 aa12.02□□□□□ -0.49
LIG1-215ENST00000597901 NRG4Q8WWG1 115 aa12.02□□□□□ -0.49
LIG1-215ENST00000597901 TOMM40LQ969M1 308 aa12.02□□□□□ -0.49
LIG1-215ENST00000597901 BANF2Q9H503 90 aa12.02□□□□□ -0.49
LIG1-215ENST00000597901 SPACA1Q9HBV2 294 aa12.02□□□□□ -0.49
LIG1-215ENST00000597901 VWFP04275 2813 aa12.02□□□□□ -0.49
LIG1-215ENST00000597901 KIAA2026Q5HYC2 2103 aa12.02□□□□□ -0.49
LIG1-215ENST00000597901 SH2D7A6NKC9 451 aaPredicted RBP12.01□□□□□ -0.49
LIG1-215ENST00000597901 LPLP06858 475 aa12.01□□□□□ -0.49
LIG1-215ENST00000597901 RAB7AP51149 207 aa12.01□□□□□ -0.49
LIG1-215ENST00000597901 CD83Q01151 205 aa12.01□□□□□ -0.49
LIG1-215ENST00000597901 INSL4Q14641 139 aa12.01□□□□□ -0.49
LIG1-215ENST00000597901 AWAT2Q6E213 333 aa12.01□□□□□ -0.49
LIG1-215ENST00000597901 MS4A15Q8N5U1 240 aa12.01□□□□□ -0.49
LIG1-215ENST00000597901 DRAM1Q8N682 238 aa12.01□□□□□ -0.49
LIG1-215ENST00000597901 TMEM104Q8NE00 496 aa12.01□□□□□ -0.49
LIG1-215ENST00000597901 OR52M1Q8NGK5 317 aa12.01□□□□□ -0.49
LIG1-215ENST00000597901 UBALD1Q8TB05 177 aa12.01□□□□□ -0.49
LIG1-215ENST00000597901 THRSPQ92748 146 aa12.01□□□□□ -0.49
LIG1-215ENST00000597901 MYDGFQ969H8 173 aa12.01□□□□□ -0.49
LIG1-215ENST00000597901 SELENOIQ9C0D9 397 aa12.01□□□□□ -0.49
LIG1-215ENST00000597901 SCN3BQ9NY72 215 aa12.01□□□□□ -0.49
LIG1-215ENST00000597901 RCC2Q9P258 522 aaKnown RBP12.01□□□□□ -0.49
LIG1-215ENST00000597901 PEX16Q9Y5Y5 336 aa12.01□□□□□ -0.49
LIG1-215ENST00000597901 A0A1W2PPI3 338 aa12□□□□□ -0.49
LIG1-215ENST00000597901 H0YHG0 523 aa12□□□□□ -0.49
LIG1-215ENST00000597901 M0QZK8 103 aa12□□□□□ -0.49
LIG1-215ENST00000597901 SNRNP70P08621 437 aaKnown RBP12□□□□□ -0.49
LIG1-215ENST00000597901 MAPK3P27361 379 aaPredicted RBP12□□□□□ -0.49
LIG1-215ENST00000597901 VHLP40337 213 aa12□□□□□ -0.49
LIG1-215ENST00000597901 GP2P55259 537 aaKnown RBP12□□□□□ -0.49
LIG1-215ENST00000597901 LOXL3P58215 753 aa12□□□□□ -0.49
LIG1-215ENST00000597901 SPHARQ15513 63 aa12□□□□□ -0.49
LIG1-215ENST00000597901 SYT6Q5T7P8 510 aaPredicted RBP12□□□□□ -0.49
LIG1-215ENST00000597901 RAB12Q6IQ22 244 aa12□□□□□ -0.49
LIG1-215ENST00000597901 FAM53AQ6NSI3 398 aaPredicted RBP12□□□□□ -0.49
LIG1-215ENST00000597901 OR10X1Q8NGY0 326 aa12□□□□□ -0.49
LIG1-215ENST00000597901 OR56B4Q8NH76 319 aa12□□□□□ -0.49
LIG1-215ENST00000597901 R3HDM4Q96D70 268 aa12□□□□□ -0.49
LIG1-215ENST00000597901 UQCC2Q9BRT2 126 aa12□□□□□ -0.49
LIG1-215ENST00000597901 MND1Q9BWT6 205 aa12□□□□□ -0.49
LIG1-215ENST00000597901 GFOD1Q9NXC2 390 aa12□□□□□ -0.49
LIG1-215ENST00000597901 ETAA1Q9NY74 926 aa12□□□□□ -0.49
LIG1-215ENST00000597901 FAM90A10PA6NDY2 464 aa11.99□□□□□ -0.49
LIG1-215ENST00000597901 FAM90A7PA6NKC0 464 aa11.99□□□□□ -0.49
LIG1-215ENST00000597901 FAM90A23PA8MXZ1 464 aa11.99□□□□□ -0.49
LIG1-215ENST00000597901 G3V4G9 280 aa11.99□□□□□ -0.49
LIG1-215ENST00000597901 AIPO00170 330 aa11.99□□□□□ -0.49
LIG1-215ENST00000597901 SDCBPO00560 298 aaPredicted RBP11.99□□□□□ -0.49
LIG1-215ENST00000597901 CRTAPO75718 401 aaPredicted RBP11.99□□□□□ -0.49
LIG1-215ENST00000597901 GAPDHP04406 335 aaKnown RBP11.99□□□□□ -0.49
LIG1-215ENST00000597901 GLAP06280 429 aa11.99□□□□□ -0.49
LIG1-215ENST00000597901 MGMTP16455 207 aa11.99□□□□□ -0.49
LIG1-215ENST00000597901 FUT3P21217 361 aa11.99□□□□□ -0.49
LIG1-215ENST00000597901 GABPB1Q06547 395 aaPredicted RBP11.99□□□□□ -0.49
LIG1-215ENST00000597901 HES1Q14469 280 aa11.99□□□□□ -0.49
LIG1-215ENST00000597901 HNF4GQ14541 408 aa11.99□□□□□ -0.49
LIG1-215ENST00000597901 TCTEX1D4Q5JR98 221 aa11.99□□□□□ -0.49
LIG1-215ENST00000597901 C9orf152Q5JTZ5 239 aa11.99□□□□□ -0.49
LIG1-215ENST00000597901 SIGIRRQ6IA17 410 aa11.99□□□□□ -0.49
LIG1-215ENST00000597901 OR8H3Q8N146 312 aa11.99□□□□□ -0.49
LIG1-215ENST00000597901 GAPTQ8N292 157 aa11.99□□□□□ -0.49
LIG1-215ENST00000597901 LINC00311Q8N616 119 aa11.99□□□□□ -0.49
LIG1-215ENST00000597901 NKAIN3Q8N8D7 197 aa11.99□□□□□ -0.49
LIG1-215ENST00000597901 C8orf31Q8N9H6 132 aa11.99□□□□□ -0.49
LIG1-215ENST00000597901 OR4F17Q8NGA8 305 aa11.99□□□□□ -0.49
LIG1-215ENST00000597901 OR4K15Q8NH41 348 aa11.99□□□□□ -0.49
LIG1-215ENST00000597901 SGCDQ92629 289 aa11.99□□□□□ -0.49
LIG1-215ENST00000597901 OR4F4Q96R69 305 aa11.99□□□□□ -0.49
LIG1-215ENST00000597901 GHRLQ9UBU3 117 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms