RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 HS3ST5Q8IZT8 346 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 RDH10Q8IZV5 341 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 OR52M1Q8NGK5 317 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 CNIH3Q8TBE1 160 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 DNAJC9Q8WXX5 260 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 DDB2Q92466 427 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 RNF166Q96A37 237 aaPredicted RBP7.8□□□□□ -1.16
TRIM28-210ENST00000597618 FGGYQ96C11 551 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 SPACA5Q96QH8 159 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 MBOAT4Q96T53 435 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 TBX5Q99593 518 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 ELAC2Q9BQ52 826 aaKnown RBP7.8□□□□□ -1.16
TRIM28-210ENST00000597618 ELOVL1Q9BW60 279 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 ZCCHC4Q9H5U6 513 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 PARP11Q9NR21 331 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 ARGLU1Q9NWB6 273 aaPredicted RBP7.8□□□□□ -1.16
TRIM28-210ENST00000597618 FAM118AQ9NWS6 357 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 STUB1Q9UNE7 303 aa7.8□□□□□ -1.16
TRIM28-210ENST00000597618 IGHV4OR15-8A0A075B7B6 117 aa7.79□□□□□ -1.16
TRIM28-210ENST00000597618 A0A087WW49 117 aa7.79□□□□□ -1.16
TRIM28-210ENST00000597618 A0A1W2PQL4 384 aaPredicted RBP7.79□□□□□ -1.16
TRIM28-210ENST00000597618 SDCBPO00560 298 aaPredicted RBP7.79□□□□□ -1.16
TRIM28-210ENST00000597618 ARPC1BO15143 372 aaKnown RBP7.79□□□□□ -1.16
TRIM28-210ENST00000597618 IGLV1-51P01701 117 aa7.79□□□□□ -1.16
TRIM28-210ENST00000597618 HLA-DRB1P01911 266 aa7.79□□□□□ -1.16
TRIM28-210ENST00000597618 OR2T7P0C7T2 308 aa7.79□□□□□ -1.16
TRIM28-210ENST00000597618 TMEM225BP0DP42 221 aa7.79□□□□□ -1.16
TRIM28-210ENST00000597618 CRISP1P54107 249 aa7.79□□□□□ -1.16
TRIM28-210ENST00000597618 TRIM25Q14258 630 aaKnown RBP7.79□□□□□ -1.16
TRIM28-210ENST00000597618 AADACL4Q5VUY2 407 aa7.79□□□□□ -1.16
TRIM28-210ENST00000597618 FAM220AQ7Z4H9 259 aa7.79□□□□□ -1.16
TRIM28-210ENST00000597618 ANKRD13BQ86YJ7 626 aa7.79□□□□□ -1.16
TRIM28-210ENST00000597618 ARHGAP24Q8N264 748 aa7.79□□□□□ -1.16
TRIM28-210ENST00000597618 MINDY2Q8NBR6 621 aa7.79□□□□□ -1.16
TRIM28-210ENST00000597618 OR13C9Q8NGT0 318 aa7.79□□□□□ -1.16
TRIM28-210ENST00000597618 LINC00476Q8WZB0 136 aa7.79□□□□□ -1.16
TRIM28-210ENST00000597618 FLYWCH2Q96CP2 140 aaKnown RBP7.79□□□□□ -1.16
TRIM28-210ENST00000597618 LRGUKQ96M69 825 aa7.79□□□□□ -1.16
TRIM28-210ENST00000597618 NR1H4Q96RI1 486 aaPredicted RBP7.79□□□□□ -1.16
TRIM28-210ENST00000597618 MYRFQ9Y2G1 1151 aa7.79□□□□□ -1.16
TRIM28-210ENST00000597618 HECTD4Q9Y4D8 3996 aa7.79□□□□□ -1.16
TRIM28-210ENST00000597618 DNAH10Q8IVF4 4471 aa7.79□□□□□ -1.16
TRIM28-210ENST00000597618 TNCP24821 2201 aa7.78□□□□□ -1.16
TRIM28-210ENST00000597618 TRAV39A0A0B4J263 110 aa7.78□□□□□ -1.16
TRIM28-210ENST00000597618 M0R129 80 aa7.78□□□□□ -1.16
TRIM28-210ENST00000597618 ISG15P05161 165 aa7.78□□□□□ -1.16
TRIM28-210ENST00000597618 GZMHP20718 246 aa7.78□□□□□ -1.16
TRIM28-210ENST00000597618 PRKACGP22612 351 aa7.78□□□□□ -1.16
TRIM28-210ENST00000597618 ZNF137PP52743 207 aa7.78□□□□□ -1.16
TRIM28-210ENST00000597618 IL13RA2Q14627 380 aa7.78□□□□□ -1.16
TRIM28-210ENST00000597618 PTGES3Q15185 160 aaKnown RBP7.78□□□□□ -1.16
TRIM28-210ENST00000597618 Q3ZCU0 254 aa7.78□□□□□ -1.16
TRIM28-210ENST00000597618 ELP2Q6IA86 826 aa7.78□□□□□ -1.16
TRIM28-210ENST00000597618 GTSCR1Q86UQ5 136 aa7.78□□□□□ -1.16
TRIM28-210ENST00000597618 HAPLN4Q86UW8 402 aa7.78□□□□□ -1.16
TRIM28-210ENST00000597618 SATL1Q86VE3 508 aa7.78□□□□□ -1.16
TRIM28-210ENST00000597618 OR10H4Q8NGA5 316 aa7.78□□□□□ -1.16
TRIM28-210ENST00000597618 PLPPR1Q8TBJ4 325 aa7.78□□□□□ -1.16
TRIM28-210ENST00000597618 TMEM163Q8TC26 289 aa7.78□□□□□ -1.16
TRIM28-210ENST00000597618 UTP4Q969X6 686 aaKnown RBP7.78□□□□□ -1.16
TRIM28-210ENST00000597618 RSRP1Q9BUV0 290 aa7.78□□□□□ -1.16
TRIM28-210ENST00000597618 TUBA4BQ9H853 241 aa7.78□□□□□ -1.16
TRIM28-210ENST00000597618 TPSG1Q9NRR2 321 aa7.78□□□□□ -1.16
TRIM28-210ENST00000597618 ARL8BQ9NVJ2 186 aa7.78□□□□□ -1.16
TRIM28-210ENST00000597618 GFOD1Q9NXC2 390 aa7.78□□□□□ -1.16
TRIM28-210ENST00000597618 WARS2Q9UGM6 360 aaKnown RBP7.78□□□□□ -1.16
TRIM28-210ENST00000597618 GNG8Q9UK08 70 aa7.78□□□□□ -1.16
TRIM28-210ENST00000597618 ERGIC3Q9Y282 383 aa7.78□□□□□ -1.16
TRIM28-210ENST00000597618 KIAA1109Q2LD37 5005 aa7.77□□□□□ -1.16
TRIM28-210ENST00000597618 IGHV7-81A0A0B4J1V7 117 aa7.77□□□□□ -1.17
TRIM28-210ENST00000597618 TMEM30CPA0ZSE6 113 aa7.77□□□□□ -1.17
TRIM28-210ENST00000597618 C12orf77C9JDV5 145 aa7.77□□□□□ -1.17
TRIM28-210ENST00000597618 FAM107AO95990 144 aa7.77□□□□□ -1.17
TRIM28-210ENST00000597618 HSPB1P04792 205 aaKnown RBP7.77□□□□□ -1.17
TRIM28-210ENST00000597618 HOXB6P17509 224 aaKnown RBP7.77□□□□□ -1.17
TRIM28-210ENST00000597618 CNTFRP26992 372 aa7.77□□□□□ -1.17
TRIM28-210ENST00000597618 BLVRBP30043 206 aaPredicted RBP7.77□□□□□ -1.17
TRIM28-210ENST00000597618 LSAMPQ13449 338 aa7.77□□□□□ -1.17
TRIM28-210ENST00000597618 KISS1Q15726 138 aa7.77□□□□□ -1.17
TRIM28-210ENST00000597618 FAHD1Q6P587 224 aa7.77□□□□□ -1.17
TRIM28-210ENST00000597618 SLC25A48Q6ZT89 311 aaKnown RBP7.77□□□□□ -1.17
TRIM28-210ENST00000597618 ADGRG5Q8IZF4 528 aa7.77□□□□□ -1.17
TRIM28-210ENST00000597618 TCTEX1D1Q8N7M0 179 aa7.77□□□□□ -1.17
TRIM28-210ENST00000597618 TCEANCQ8N8B7 351 aa7.77□□□□□ -1.17
TRIM28-210ENST00000597618 OR13C3Q8NGS6 347 aa7.77□□□□□ -1.17
TRIM28-210ENST00000597618 OR2G2Q8NGZ5 317 aa7.77□□□□□ -1.17
TRIM28-210ENST00000597618 ARL11Q969Q4 196 aa7.77□□□□□ -1.17
TRIM28-210ENST00000597618 DPCDQ9BVM2 203 aaPredicted RBP7.77□□□□□ -1.17
TRIM28-210ENST00000597618 CST11Q9H112 138 aa7.77□□□□□ -1.17
TRIM28-210ENST00000597618 RETNQ9HD89 108 aa7.77□□□□□ -1.17
TRIM28-210ENST00000597618 FOXA2Q9Y261 457 aaPredicted RBP7.77□□□□□ -1.17
TRIM28-210ENST00000597618 KMT2AQ03164 3969 aa7.76□□□□□ -1.17
TRIM28-210ENST00000597618 A0A1W2PN81 502 aa7.76□□□□□ -1.17
TRIM28-210ENST00000597618 H0Y980 276 aa7.76□□□□□ -1.17
TRIM28-210ENST00000597618 C15orf65H3BRN8 121 aa7.76□□□□□ -1.17
TRIM28-210ENST00000597618 LY6G6CO95867 125 aa7.76□□□□□ -1.17
TRIM28-210ENST00000597618 CSTBP04080 98 aaKnown RBP7.76□□□□□ -1.17
TRIM28-210ENST00000597618 ATP6V1E1P36543 226 aa7.76□□□□□ -1.17
TRIM28-210ENST00000597618 CHRNA7P36544 502 aa7.76□□□□□ -1.17
TRIM28-210ENST00000597618 VHLP40337 213 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms