RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 MTORP42345 2549 aa12.7□□□□□ -0.38
SMCO4-206ENST00000596676 HIVEP2P31629 2446 aa12.7□□□□□ -0.38
SMCO4-206ENST00000596676 FN1P02751 2386 aaKnown RBP12.7□□□□□ -0.38
SMCO4-206ENST00000596676 FAM25AB3EWG3 89 aa12.69□□□□□ -0.38
SMCO4-206ENST00000596676 FAM25CB3EWG5 89 aa12.69□□□□□ -0.38
SMCO4-206ENST00000596676 FAM25GB3EWG6 89 aa12.69□□□□□ -0.38
SMCO4-206ENST00000596676 RNASEK-C17orf49H0YIS7 233 aa12.69□□□□□ -0.38
SMCO4-206ENST00000596676 C15orf65H3BRN8 121 aa12.69□□□□□ -0.38
SMCO4-206ENST00000596676 J3QLI3 93 aa12.69□□□□□ -0.38
SMCO4-206ENST00000596676 SSX5O60225 188 aa12.69□□□□□ -0.38
SMCO4-206ENST00000596676 NAPSAO96009 420 aa12.69□□□□□ -0.38
SMCO4-206ENST00000596676 IGHV3-7P01780 117 aa12.69□□□□□ -0.38
SMCO4-206ENST00000596676 GUCA2AQ02747 115 aa12.69□□□□□ -0.38
SMCO4-206ENST00000596676 RUSC1-AS1Q66K80 236 aa12.69□□□□□ -0.38
SMCO4-206ENST00000596676 MZT2AQ6P582 158 aa12.69□□□□□ -0.38
SMCO4-206ENST00000596676 KIR3DL3Q8N743 410 aa12.69□□□□□ -0.38
SMCO4-206ENST00000596676 OR1L1Q8NH94 360 aa12.69□□□□□ -0.38
SMCO4-206ENST00000596676 NUDCD2Q8WVJ2 157 aa12.69□□□□□ -0.38
SMCO4-206ENST00000596676 AP3S1Q92572 193 aa12.69□□□□□ -0.38
SMCO4-206ENST00000596676 UPRTQ96BW1 309 aa12.69□□□□□ -0.38
SMCO4-206ENST00000596676 S100A16Q96FQ6 103 aaKnown RBP12.69□□□□□ -0.38
SMCO4-206ENST00000596676 C6orf62Q9GZU0 229 aaPredicted RBP12.69□□□□□ -0.38
SMCO4-206ENST00000596676 NXF2Q9GZY0 626 aaKnown RBP12.69□□□□□ -0.38
SMCO4-206ENST00000596676 NCOR1P1Q9H4R4 102 aa12.69□□□□□ -0.38
SMCO4-206ENST00000596676 CALYQ9NYX4 217 aa12.69□□□□□ -0.38
SMCO4-206ENST00000596676 OR6C3Q9NZP0 311 aa12.69□□□□□ -0.38
SMCO4-206ENST00000596676 LPAR3Q9UBY5 353 aa12.69□□□□□ -0.38
SMCO4-206ENST00000596676 KBTBD11-OT1A0A1B0GTJ5 212 aa12.68□□□□□ -0.38
SMCO4-206ENST00000596676 C12orf77C9JDV5 145 aa12.68□□□□□ -0.38
SMCO4-206ENST00000596676 H3BUI4 141 aa12.68□□□□□ -0.38
SMCO4-206ENST00000596676 M0R1W7 72 aa12.68□□□□□ -0.38
SMCO4-206ENST00000596676 RGS5O15539 181 aa12.68□□□□□ -0.38
SMCO4-206ENST00000596676 XRCC3O43542 346 aa12.68□□□□□ -0.38
SMCO4-206ENST00000596676 APOA1P02647 267 aa12.68□□□□□ -0.38
SMCO4-206ENST00000596676 FCER2P06734 321 aa12.68□□□□□ -0.38
SMCO4-206ENST00000596676 IGHV1-8P0DP01 117 aa12.68□□□□□ -0.38
SMCO4-206ENST00000596676 HOXB4P17483 251 aaPredicted RBP12.68□□□□□ -0.38
SMCO4-206ENST00000596676 TAS2R20P59543 309 aa12.68□□□□□ -0.38
SMCO4-206ENST00000596676 DYNC1I2Q13409 638 aaKnown RBP12.68□□□□□ -0.38
SMCO4-206ENST00000596676 ARFRP1Q13795 201 aa12.68□□□□□ -0.38
SMCO4-206ENST00000596676 ZNF880Q6PDB4 577 aa12.68□□□□□ -0.38
SMCO4-206ENST00000596676 PRR18Q8N4B5 295 aa12.68□□□□□ -0.38
SMCO4-206ENST00000596676 LEAP2Q969E1 77 aa12.68□□□□□ -0.38
SMCO4-206ENST00000596676 ARL11Q969Q4 196 aa12.68□□□□□ -0.38
SMCO4-206ENST00000596676 PHF21AQ96BD5 680 aa12.68□□□□□ -0.38
SMCO4-206ENST00000596676 SUCNR1Q9BXA5 334 aa12.68□□□□□ -0.38
SMCO4-206ENST00000596676 AUNIPQ9H7T9 357 aa12.68□□□□□ -0.38
SMCO4-206ENST00000596676 DIABLOQ9NR28 239 aa12.68□□□□□ -0.38
SMCO4-206ENST00000596676 TAS2R3Q9NYW6 316 aa12.68□□□□□ -0.38
SMCO4-206ENST00000596676 ZNRD1Q9P1U0 126 aa12.68□□□□□ -0.38
SMCO4-206ENST00000596676 MRPS7Q9Y2R9 242 aaKnown RBP12.68□□□□□ -0.38
SMCO4-206ENST00000596676 IGKV1D-8A0A087WSZ0 117 aa12.67□□□□□ -0.38
SMCO4-206ENST00000596676 IGHV3-43A0A0B4J1X8 118 aa12.67□□□□□ -0.38
SMCO4-206ENST00000596676 TRAV40A0A0B4J280 105 aa12.67□□□□□ -0.38
SMCO4-206ENST00000596676 CENPVL3A0A0U1RRI6 287 aa12.67□□□□□ -0.38
SMCO4-206ENST00000596676 MEIS3P1A6NDR6 274 aa12.67□□□□□ -0.38
SMCO4-206ENST00000596676 ZNF729A6NN14 1252 aaPredicted RBP12.67□□□□□ -0.38
SMCO4-206ENST00000596676 FSHBP01225 129 aa12.67□□□□□ -0.38
SMCO4-206ENST00000596676 HLA-DQB1P01920 261 aa12.67□□□□□ -0.38
SMCO4-206ENST00000596676 HBZP02008 142 aa12.67□□□□□ -0.38
SMCO4-206ENST00000596676 CD3GP09693 182 aa12.67□□□□□ -0.38
SMCO4-206ENST00000596676 IGHV3-43DP0DP04 118 aa12.67□□□□□ -0.38
SMCO4-206ENST00000596676 PRTN3P24158 256 aa12.67□□□□□ -0.38
SMCO4-206ENST00000596676 COX7A1P24310 79 aa12.67□□□□□ -0.38
SMCO4-206ENST00000596676 NFYBP25208 207 aa12.67□□□□□ -0.38
SMCO4-206ENST00000596676 FAM189A2Q15884 450 aa12.67□□□□□ -0.38
SMCO4-206ENST00000596676 TMEM69Q5SWH9 247 aa12.67□□□□□ -0.38
SMCO4-206ENST00000596676 HACD4Q5VWC8 232 aa12.67□□□□□ -0.38
SMCO4-206ENST00000596676 BRD3OSQ6XYD6 125 aa12.67□□□□□ -0.38
SMCO4-206ENST00000596676 BCL6BQ8N143 479 aaPredicted RBP12.67□□□□□ -0.38
SMCO4-206ENST00000596676 ZNF565Q8N9K5 539 aa12.67□□□□□ -0.38
SMCO4-206ENST00000596676 C22orf15Q8WYQ4 148 aa12.67□□□□□ -0.38
SMCO4-206ENST00000596676 KIRREL1Q96J84 757 aa12.67□□□□□ -0.38
SMCO4-206ENST00000596676 TAF9BQ9HBM6 251 aa12.67□□□□□ -0.38
SMCO4-206ENST00000596676 Q9N2K0 584 aa12.67□□□□□ -0.38
SMCO4-206ENST00000596676 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.67□□□□□ -0.38
SMCO4-206ENST00000596676 MBNL3Q9NUK0 354 aaKnown RBP12.67□□□□□ -0.38
SMCO4-206ENST00000596676 NSD1Q96L73 2696 aaPredicted RBP12.67□□□□□ -0.38
SMCO4-206ENST00000596676 MEIOCA2RUB1 952 aa12.66□□□□□ -0.38
SMCO4-206ENST00000596676 NPIPB11E5RHQ5 1161 aa12.66□□□□□ -0.38
SMCO4-206ENST00000596676 CA11O75493 328 aa12.66□□□□□ -0.38
SMCO4-206ENST00000596676 CLPXO76031 633 aa12.66□□□□□ -0.38
SMCO4-206ENST00000596676 FCGR3AP08637 254 aa12.66□□□□□ -0.38
SMCO4-206ENST00000596676 SCTP09683 121 aa12.66□□□□□ -0.38
SMCO4-206ENST00000596676 CNPY1Q3B7I2 92 aa12.66□□□□□ -0.38
SMCO4-206ENST00000596676 RNASE12Q5GAN4 147 aaKnown RBP12.66□□□□□ -0.38
SMCO4-206ENST00000596676 CNIH2Q6PI25 160 aa12.66□□□□□ -0.38
SMCO4-206ENST00000596676 C1orf122Q6ZSJ8 110 aa12.66□□□□□ -0.38
SMCO4-206ENST00000596676 SNX29P2Q8IUI4 249 aa12.66□□□□□ -0.38
SMCO4-206ENST00000596676 LURAP1LQ8IV03 231 aa12.66□□□□□ -0.38
SMCO4-206ENST00000596676 DMRTB1Q96MA1 342 aa12.66□□□□□ -0.38
SMCO4-206ENST00000596676 GAL3ST2Q9H3Q3 398 aa12.66□□□□□ -0.38
SMCO4-206ENST00000596676 METTL8Q9H825 291 aaKnown RBP12.66□□□□□ -0.38
SMCO4-206ENST00000596676 C12orf4Q9NQ89 552 aa12.66□□□□□ -0.38
SMCO4-206ENST00000596676 IDI2-AS1Q9NZ38 188 aa12.66□□□□□ -0.38
SMCO4-206ENST00000596676 EXTL2Q9UBQ6 330 aa12.66□□□□□ -0.38
SMCO4-206ENST00000596676 MXRA5Q9NR99 2828 aa12.66□□□□□ -0.38
SMCO4-206ENST00000596676 TRBV6-6A0A0A6YYG2 114 aa12.65□□□□□ -0.38
SMCO4-206ENST00000596676 A0A1W2PPH5 198 aa12.65□□□□□ -0.38
SMCO4-206ENST00000596676 GSTP1P09211 210 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms