RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 DMRTC1Q5HYR2 192 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 NHLRC3Q5JS37 347 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 ATPAF1Q5TC12 328 aaPredicted RBP10.64□□□□□ -0.71
SCAF1-202ENST00000595242 SIGIRRQ6IA17 410 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 ELP2Q6IA86 826 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 FIP1L1Q6UN15 594 aaKnown RBP10.64□□□□□ -0.71
SCAF1-202ENST00000595242 C9orf139Q6ZV77 190 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 RFPL4BQ6ZWI9 263 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 ZDHHC23Q8IYP9 409 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 BEST4Q8NFU0 473 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 OR4S1Q8NGB4 309 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 OR5A2Q8NGI9 324 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 ZFAND1Q8TCF1 268 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 MRAPQ8TCY5 172 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 HYLS1Q96M11 299 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 FGF23Q9GZV9 251 aaPredicted RBP10.64□□□□□ -0.71
SCAF1-202ENST00000595242 TNFRSF19Q9NS68 423 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 EIF3KQ9UBQ5 218 aaKnown RBP10.64□□□□□ -0.71
SCAF1-202ENST00000595242 MPC1Q9Y5U8 109 aa10.64□□□□□ -0.71
SCAF1-202ENST00000595242 FAM172BPA6NC97 362 aa10.63□□□□□ -0.71
SCAF1-202ENST00000595242 OR5B21A6NL26 309 aa10.63□□□□□ -0.71
SCAF1-202ENST00000595242 CD300LBA8K4G0 201 aa10.63□□□□□ -0.71
SCAF1-202ENST00000595242 SSNA1O43805 119 aa10.63□□□□□ -0.71
SCAF1-202ENST00000595242 ANGPTL7O43827 346 aa10.63□□□□□ -0.71
SCAF1-202ENST00000595242 HTR3BO95264 441 aa10.63□□□□□ -0.71
SCAF1-202ENST00000595242 CCNOP22674 350 aa10.63□□□□□ -0.71
SCAF1-202ENST00000595242 TUBG1P23258 451 aa10.63□□□□□ -0.71
SCAF1-202ENST00000595242 CHATP28329 748 aa10.63□□□□□ -0.71
SCAF1-202ENST00000595242 SELENOVP59797 346 aa10.63□□□□□ -0.71
SCAF1-202ENST00000595242 IFITM2Q01629 132 aa10.63□□□□□ -0.71
SCAF1-202ENST00000595242 CDK10Q15131 360 aa10.63□□□□□ -0.71
SCAF1-202ENST00000595242 MICBQ29980 383 aa10.63□□□□□ -0.71
SCAF1-202ENST00000595242 OR52W1Q6IF63 320 aa10.63□□□□□ -0.71
SCAF1-202ENST00000595242 RGS7BPQ6MZT1 257 aaPredicted RBP10.63□□□□□ -0.71
SCAF1-202ENST00000595242 OSR2Q8N2R0 312 aa10.63□□□□□ -0.71
SCAF1-202ENST00000595242 ASB13Q8WXK3 278 aa10.63□□□□□ -0.71
SCAF1-202ENST00000595242 CCL17Q92583 94 aa10.63□□□□□ -0.71
SCAF1-202ENST00000595242 EMG1Q92979 244 aaKnown RBP10.63□□□□□ -0.71
SCAF1-202ENST00000595242 MRGPRFQ96AM1 343 aa10.63□□□□□ -0.71
SCAF1-202ENST00000595242 PAPOLGQ9BWT3 736 aaKnown RBP10.63□□□□□ -0.71
SCAF1-202ENST00000595242 ZNF436Q9C0F3 470 aaPredicted RBP10.63□□□□□ -0.71
SCAF1-202ENST00000595242 RANBP3Q9H6Z4 567 aaPredicted RBP10.63□□□□□ -0.71
SCAF1-202ENST00000595242 TUBG2Q9NRH3 451 aa10.63□□□□□ -0.71
SCAF1-202ENST00000595242 PAIP2BQ9ULR5 123 aaKnown RBP10.63□□□□□ -0.71
SCAF1-202ENST00000595242 RNF114Q9Y508 228 aa10.63□□□□□ -0.71
SCAF1-202ENST00000595242 INSIG2Q9Y5U4 225 aa10.63□□□□□ -0.71
SCAF1-202ENST00000595242 DNAH3Q8TD57 4116 aa10.62□□□□□ -0.71
SCAF1-202ENST00000595242 UBE2QL1A1L167 161 aa10.62□□□□□ -0.71
SCAF1-202ENST00000595242 SRRM5B3KS81 715 aa10.62□□□□□ -0.71
SCAF1-202ENST00000595242 H3BUI4 141 aa10.62□□□□□ -0.71
SCAF1-202ENST00000595242 FABP7O15540 132 aa10.62□□□□□ -0.71
SCAF1-202ENST00000595242 OR2A4O95047 310 aa10.62□□□□□ -0.71
SCAF1-202ENST00000595242 GIPP09681 153 aaPredicted RBP10.62□□□□□ -0.71
SCAF1-202ENST00000595242 DTYMKP23919 212 aa10.62□□□□□ -0.71
SCAF1-202ENST00000595242 HRH1P35367 487 aa10.62□□□□□ -0.71
SCAF1-202ENST00000595242 RBM11P57052 281 aaKnown RBP10.62□□□□□ -0.71
SCAF1-202ENST00000595242 LOXL3P58215 753 aa10.62□□□□□ -0.71
SCAF1-202ENST00000595242 TAS2R46P59540 309 aa10.62□□□□□ -0.71
SCAF1-202ENST00000595242 MRPS15P82914 257 aaKnown RBP10.62□□□□□ -0.71
SCAF1-202ENST00000595242 ARFRP1Q13795 201 aa10.62□□□□□ -0.71
SCAF1-202ENST00000595242 PDCD1Q15116 288 aa10.62□□□□□ -0.71
SCAF1-202ENST00000595242 MPPED2Q15777 294 aa10.62□□□□□ -0.71
SCAF1-202ENST00000595242 LHFPL1Q86WI0 220 aa10.62□□□□□ -0.71
SCAF1-202ENST00000595242 CALHM1Q8IU99 346 aa10.62□□□□□ -0.71
SCAF1-202ENST00000595242 OR4K15Q8NH41 348 aa10.62□□□□□ -0.71
SCAF1-202ENST00000595242 ZNF431Q8TF32 576 aaPredicted RBP10.62□□□□□ -0.71
SCAF1-202ENST00000595242 OR5P3Q8WZ94 311 aa10.62□□□□□ -0.71
SCAF1-202ENST00000595242 GTF3AQ92664 365 aaKnown RBP10.62□□□□□ -0.71
SCAF1-202ENST00000595242 DACT3Q96B18 629 aaPredicted RBP10.62□□□□□ -0.71
SCAF1-202ENST00000595242 OR2A7Q96R45 310 aa10.62□□□□□ -0.71
SCAF1-202ENST00000595242 CHST6Q9GZX3 395 aa10.62□□□□□ -0.71
SCAF1-202ENST00000595242 SAP30LQ9HAJ7 183 aa10.62□□□□□ -0.71
SCAF1-202ENST00000595242 ELL3Q9HB65 397 aaPredicted RBP10.62□□□□□ -0.71
SCAF1-202ENST00000595242 ZNF222Q9UK12 451 aa10.62□□□□□ -0.71
SCAF1-202ENST00000595242 POLR3KQ9Y2Y1 108 aaPredicted RBP10.62□□□□□ -0.71
SCAF1-202ENST00000595242 NOP16Q9Y3C1 178 aaKnown RBP10.62□□□□□ -0.71
SCAF1-202ENST00000595242 IGLV3-9A0A075B6K5 115 aa10.61□□□□□ -0.71
SCAF1-202ENST00000595242 ANKRD30BLA7E2S9 258 aa10.61□□□□□ -0.71
SCAF1-202ENST00000595242 G3V3Q6 166 aa10.61□□□□□ -0.71
SCAF1-202ENST00000595242 RLN1P04808 185 aa10.61□□□□□ -0.71
SCAF1-202ENST00000595242 FCER2P06734 321 aa10.61□□□□□ -0.71
SCAF1-202ENST00000595242 SFTPBP07988 381 aa10.61□□□□□ -0.71
SCAF1-202ENST00000595242 OR4E1P0C645 316 aa10.61□□□□□ -0.71
SCAF1-202ENST00000595242 KLF3P57682 345 aaPredicted RBP10.61□□□□□ -0.71
SCAF1-202ENST00000595242 UBE2MP61081 183 aaKnown RBP10.61□□□□□ -0.71
SCAF1-202ENST00000595242 C2orf68Q2NKX9 166 aa10.61□□□□□ -0.71
SCAF1-202ENST00000595242 SAMD5Q5TGI4 173 aa10.61□□□□□ -0.71
SCAF1-202ENST00000595242 SLC25A42Q86VD7 318 aa10.61□□□□□ -0.71
SCAF1-202ENST00000595242 ZDHHC16Q969W1 377 aa10.61□□□□□ -0.71
SCAF1-202ENST00000595242 ELMOD3Q96FG2 381 aa10.61□□□□□ -0.71
SCAF1-202ENST00000595242 PKIBQ9C010 78 aa10.61□□□□□ -0.71
SCAF1-202ENST00000595242 RHOFQ9HBH0 211 aa10.61□□□□□ -0.71
SCAF1-202ENST00000595242 CDH20Q9HBT6 801 aa10.61□□□□□ -0.71
SCAF1-202ENST00000595242 MGAT4CQ9UBM8 478 aa10.61□□□□□ -0.71
SCAF1-202ENST00000595242 VSIG4Q9Y279 399 aa10.61□□□□□ -0.71
SCAF1-202ENST00000595242 IQCF6A8MYZ5 107 aa10.6□□□□□ -0.71
SCAF1-202ENST00000595242 PDCD6O75340 191 aa10.6□□□□□ -0.71
SCAF1-202ENST00000595242 PLATP00750 562 aa10.6□□□□□ -0.71
SCAF1-202ENST00000595242 RAC2P15153 192 aa10.6□□□□□ -0.71
SCAF1-202ENST00000595242 ZNF250P15622 560 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms