RNA–Protein interactions for RNA: ENST00000593504.5

SYMPK-202, Transcript of symplekin, humanhuman

TSL 2

Gene SYMPK, Length 5,107 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-202ENST00000593504 RPUSD4Q96CM3 377 aaKnown RBP13.15□□□□□ -0.3
SYMPK-202ENST00000593504 POM121L2Q96KW2 1035 aa13.15□□□□□ -0.3
SYMPK-202ENST00000593504 Q96M66 194 aa13.15□□□□□ -0.3
SYMPK-202ENST00000593504 C9orf172C9J069 976 aa13.15□□□□□ -0.31
SYMPK-202ENST00000593504 F6UZH7 168 aa13.15□□□□□ -0.31
SYMPK-202ENST00000593504 AESQ08117 197 aa13.15□□□□□ -0.31
SYMPK-202ENST00000593504 SPINK9Q5DT21 86 aa13.15□□□□□ -0.31
SYMPK-202ENST00000593504 ZNF251Q9BRH9 671 aa13.15□□□□□ -0.31
SYMPK-202ENST00000593504 NUDT16L1Q9BRJ7 211 aaKnown RBP13.15□□□□□ -0.31
SYMPK-202ENST00000593504 OR2B8PP59922 312 aa13.14□□□□□ -0.31
SYMPK-202ENST00000593504 UNC119Q13432 240 aa13.14□□□□□ -0.31
SYMPK-202ENST00000593504 FDCSPQ8NFU4 85 aa13.14□□□□□ -0.31
SYMPK-202ENST00000593504 GAL3ST2Q9H3Q3 398 aa13.14□□□□□ -0.31
SYMPK-202ENST00000593504 KIAA1456Q9P272 454 aa13.14□□□□□ -0.31
SYMPK-202ENST00000593504 RNF7Q9UBF6 113 aa13.14□□□□□ -0.31
SYMPK-202ENST00000593504 MDC1Q14676 2089 aaKnown RBP13.14□□□□□ -0.31
SYMPK-202ENST00000593504 LOC390937A0A1W2PQ73 354 aa13.14□□□□□ -0.31
SYMPK-202ENST00000593504 CHST1O43916 411 aa13.14□□□□□ -0.31
SYMPK-202ENST00000593504 RD3LP0DJH9 198 aa13.14□□□□□ -0.31
SYMPK-202ENST00000593504 ZNF837Q96EG3 531 aaPredicted RBP13.14□□□□□ -0.31
SYMPK-202ENST00000593504 LINC00470Q9BZP3 86 aa13.14□□□□□ -0.31
SYMPK-202ENST00000593504 RP1P56715 2156 aa13.14□□□□□ -0.31
SYMPK-202ENST00000593504 C16orf97H3BN30 126 aa13.14□□□□□ -0.31
SYMPK-202ENST00000593504 GAB2Q9UQC2 676 aa13.14□□□□□ -0.31
SYMPK-202ENST00000593504 FAM96BQ9Y3D0 163 aa13.14□□□□□ -0.31
SYMPK-202ENST00000593504 ST8SIA5O15466 376 aa13.14□□□□□ -0.31
SYMPK-202ENST00000593504 CD74P04233 296 aa13.14□□□□□ -0.31
SYMPK-202ENST00000593504 CD3EP07766 207 aa13.14□□□□□ -0.31
SYMPK-202ENST00000593504 CHRNB4P30926 498 aa13.14□□□□□ -0.31
SYMPK-202ENST00000593504 ZNF345Q14585 488 aa13.14□□□□□ -0.31
SYMPK-202ENST00000593504 SYNGR2O43760 224 aa13.13□□□□□ -0.31
SYMPK-202ENST00000593504 CDS2O95674 445 aa13.13□□□□□ -0.31
SYMPK-202ENST00000593504 SMIM6P0DI80 62 aa13.13□□□□□ -0.31
SYMPK-202ENST00000593504 GZMHP20718 246 aa13.13□□□□□ -0.31
SYMPK-202ENST00000593504 DYNLT3P51808 116 aa13.13□□□□□ -0.31
SYMPK-202ENST00000593504 PHYHD1Q5SRE7 291 aa13.13□□□□□ -0.31
SYMPK-202ENST00000593504 HSF4Q9ULV5 492 aa13.13□□□□□ -0.31
SYMPK-202ENST00000593504 PPP5D1E7EU14 171 aa13.13□□□□□ -0.31
SYMPK-202ENST00000593504 TMPRSS2O15393 492 aa13.13□□□□□ -0.31
SYMPK-202ENST00000593504 KCNAB3O43448 404 aa13.13□□□□□ -0.31
SYMPK-202ENST00000593504 HSD17B13Q7Z5P4 300 aaPredicted RBP13.13□□□□□ -0.31
SYMPK-202ENST00000593504 IGHV3OR15-7A0A075B7D8 119 aa13.13□□□□□ -0.31
SYMPK-202ENST00000593504 OR5H1A6NKK0 313 aa13.13□□□□□ -0.31
SYMPK-202ENST00000593504 SYNGR3O43761 229 aa13.13□□□□□ -0.31
SYMPK-202ENST00000593504 MGST1P10620 155 aaKnown RBP13.13□□□□□ -0.31
SYMPK-202ENST00000593504 STUMQ69YW2 141 aa13.13□□□□□ -0.31
SYMPK-202ENST00000593504 BAGE3Q86Y29 109 aa13.13□□□□□ -0.31
SYMPK-202ENST00000593504 BAGE2Q86Y30 109 aa13.13□□□□□ -0.31
SYMPK-202ENST00000593504 TRAF4Q9BUZ4 470 aaPredicted RBP13.13□□□□□ -0.31
SYMPK-202ENST00000593504 MTCH1Q9NZJ7 389 aa13.13□□□□□ -0.31
SYMPK-202ENST00000593504 TRAV38-1A0A0B4J264 116 aa13.13□□□□□ -0.31
SYMPK-202ENST00000593504 IL24Q13007 206 aa13.13□□□□□ -0.31
SYMPK-202ENST00000593504 MOB3BQ86TA1 216 aa13.13□□□□□ -0.31
SYMPK-202ENST00000593504 C15orf54Q8N8G6 183 aa13.13□□□□□ -0.31
SYMPK-202ENST00000593504 SEMA5BQ9P283 1151 aa13.13□□□□□ -0.31
SYMPK-202ENST00000593504 FAM90A10PA6NDY2 464 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 FAM90A18PA6NE21 464 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 FAM90A16PA6NEW6 464 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 FAM90A20PA6NIJ5 464 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 FAM90A8PA6NJQ4 464 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 FAM90A7PA6NKC0 464 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 FAM90A22PA8MWA6 464 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 FAM90A12PA8MX19 464 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 FAM90A5PA8MXJ8 464 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 FAM90A23PA8MXZ1 464 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 SCTP09683 121 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 FAM90A15PP0C7V4 464 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 FAM90A13PP0C7W8 464 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 FAM90A14PP0C7W9 464 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 FAM90A24PP0C7X0 464 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 S100A7P31151 101 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 RANP62826 216 aaKnown RBP13.12□□□□□ -0.31
SYMPK-202ENST00000593504 SMIM15Q7Z3B0 74 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 MRGPRFQ96AM1 343 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 SMIM7Q9BQ49 75 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 USB1Q9BQ65 265 aaKnown RBP13.12□□□□□ -0.31
SYMPK-202ENST00000593504 V9GYS6 101 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 A0A1B0GTI1 187 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 LINC00862A6NCI5 91 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 KIR2DS2P43631 304 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 DVL1P1P54792 670 aaPredicted RBP13.12□□□□□ -0.31
SYMPK-202ENST00000593504 TAS2R45P59539 299 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 PDZD11Q5EBL8 140 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 C1QL2Q7Z5L3 287 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 OR11H4Q8NGC9 324 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 H7BYZ3 331 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 EFNA2O43921 213 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 OR5G3P0C626 314 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 KRTCAP3Q53RY4 240 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 TMEM65Q6PI78 240 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 FAM117AQ9C073 453 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 POMT1Q9Y6A1 747 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 PSG2P11465 335 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 IGFBP3P17936 291 aaPredicted RBP13.12□□□□□ -0.31
SYMPK-202ENST00000593504 TMEM50BP56557 158 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 IFITM2Q01629 132 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 COL10A1Q03692 680 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 TMEM18Q96B42 140 aa13.12□□□□□ -0.31
SYMPK-202ENST00000593504 SAT2Q96F10 170 aaPredicted RBP13.12□□□□□ -0.31
SYMPK-202ENST00000593504 SAP30LQ9HAJ7 183 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms