RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 CMTM1Q8IZ96 169 aa12.75□□□□□ -0.37
SMARCA4-219ENST00000592604 HOXC12P31275 282 aa12.75□□□□□ -0.37
SMARCA4-219ENST00000592604 RPL23AP62750 156 aaKnown RBP12.75□□□□□ -0.37
SMARCA4-219ENST00000592604 RNPS1Q15287 305 aaKnown RBP12.75□□□□□ -0.37
SMARCA4-219ENST00000592604 AAED1Q7RTV5 226 aa12.75□□□□□ -0.37
SMARCA4-219ENST00000592604 TMEM217Q8N7C4 229 aa12.75□□□□□ -0.37
SMARCA4-219ENST00000592604 OR5D13Q8NGL4 314 aa12.75□□□□□ -0.37
SMARCA4-219ENST00000592604 M1APQ8TC57 530 aa12.75□□□□□ -0.37
SMARCA4-219ENST00000592604 HS3ST3B1Q9Y662 390 aa12.75□□□□□ -0.37
SMARCA4-219ENST00000592604 TGIF2-C20orf24A0A0A6YYL0 155 aa12.75□□□□□ -0.37
SMARCA4-219ENST00000592604 IGKV1D-13A0A0B4J2D9 117 aa12.75□□□□□ -0.37
SMARCA4-219ENST00000592604 LOC102723971A0A1B0GUV8 181 aa12.75□□□□□ -0.37
SMARCA4-219ENST00000592604 ZNF587BE7ETH6 402 aa12.75□□□□□ -0.37
SMARCA4-219ENST00000592604 SCTP09683 121 aa12.75□□□□□ -0.37
SMARCA4-219ENST00000592604 IGKV1-13P0DP09 117 aa12.75□□□□□ -0.37
SMARCA4-219ENST00000592604 COX6A1P12074 109 aa12.75□□□□□ -0.37
SMARCA4-219ENST00000592604 HLA-DRB3P79483 266 aa12.75□□□□□ -0.37
SMARCA4-219ENST00000592604 RIPPLY2Q5TAB7 128 aa12.75□□□□□ -0.37
SMARCA4-219ENST00000592604 SPNS3Q6ZMD2 512 aa12.75□□□□□ -0.37
SMARCA4-219ENST00000592604 ALKBH3Q96Q83 286 aaPredicted RBP12.75□□□□□ -0.37
SMARCA4-219ENST00000592604 C1QTNF5Q9BXJ0 243 aa12.75□□□□□ -0.37
SMARCA4-219ENST00000592604 CALHM2Q9HA72 323 aa12.75□□□□□ -0.37
SMARCA4-219ENST00000592604 OCIAD1Q9NX40 245 aa12.75□□□□□ -0.37
SMARCA4-219ENST00000592604 CACNA1EQ15878 2313 aa12.74□□□□□ -0.37
SMARCA4-219ENST00000592604 F10P00742 488 aa12.74□□□□□ -0.37
SMARCA4-219ENST00000592604 LBX1P52954 281 aa12.74□□□□□ -0.37
SMARCA4-219ENST00000592604 ZNF154Q13106 437 aa12.74□□□□□ -0.37
SMARCA4-219ENST00000592604 HERPUD1Q15011 391 aa12.74□□□□□ -0.37
SMARCA4-219ENST00000592604 C5orf24Q7Z6I8 188 aa12.74□□□□□ -0.37
SMARCA4-219ENST00000592604 TGIF2LXQ8IUE1 241 aa12.74□□□□□ -0.37
SMARCA4-219ENST00000592604 DUSP23Q9BVJ7 150 aa12.74□□□□□ -0.37
SMARCA4-219ENST00000592604 TAAR3PQ9P1P4 343 aa12.74□□□□□ -0.37
SMARCA4-219ENST00000592604 URGCP-MRPS24S4R325 110 aa12.74□□□□□ -0.37
SMARCA4-219ENST00000592604 ELOA3CA0A087WX78 387 aaPredicted RBP12.74□□□□□ -0.37
SMARCA4-219ENST00000592604 DFFBO76075 338 aa12.74□□□□□ -0.37
SMARCA4-219ENST00000592604 UMODP07911 640 aa12.74□□□□□ -0.37
SMARCA4-219ENST00000592604 FGF5P12034 268 aa12.74□□□□□ -0.37
SMARCA4-219ENST00000592604 CEACAM16Q2WEN9 425 aa12.74□□□□□ -0.37
SMARCA4-219ENST00000592604 DNLZQ5SXM8 178 aa12.74□□□□□ -0.37
SMARCA4-219ENST00000592604 PRDM14Q9GZV8 571 aa12.74□□□□□ -0.37
SMARCA4-219ENST00000592604 TMEM242Q9NWH2 141 aa12.74□□□□□ -0.37
SMARCA4-219ENST00000592604 H0Y980 276 aa12.73□□□□□ -0.37
SMARCA4-219ENST00000592604 CTXN2P0C2S0 81 aa12.73□□□□□ -0.37
SMARCA4-219ENST00000592604 RAB4BP61018 213 aa12.73□□□□□ -0.37
SMARCA4-219ENST00000592604 SAXO1Q8IYX7 474 aa12.73□□□□□ -0.37
SMARCA4-219ENST00000592604 KCNE4Q8WWG9 221 aa12.73□□□□□ -0.37
SMARCA4-219ENST00000592604 NAT6Q93015 286 aa12.73□□□□□ -0.37
SMARCA4-219ENST00000592604 CCL28Q9NRJ3 127 aa12.73□□□□□ -0.37
SMARCA4-219ENST00000592604 MRPS17Q9Y2R5 130 aaKnown RBP12.73□□□□□ -0.37
SMARCA4-219ENST00000592604 CYB5BO43169 146 aa12.73□□□□□ -0.37
SMARCA4-219ENST00000592604 MMP7P09237 267 aaPredicted RBP12.73□□□□□ -0.37
SMARCA4-219ENST00000592604 SAPCD1Q5SSQ6 148 aa12.73□□□□□ -0.37
SMARCA4-219ENST00000592604 COLCA1Q6ZS62 124 aa12.73□□□□□ -0.37
SMARCA4-219ENST00000592604 GGNQ86UU5 652 aa12.73□□□□□ -0.37
SMARCA4-219ENST00000592604 H1FOOQ8IZA3 346 aaPredicted RBP12.73□□□□□ -0.37
SMARCA4-219ENST00000592604 ZNF383Q8NA42 475 aa12.73□□□□□ -0.37
SMARCA4-219ENST00000592604 GPHA2Q96T91 129 aa12.73□□□□□ -0.37
SMARCA4-219ENST00000592604 GPR35Q9HC97 309 aa12.73□□□□□ -0.37
SMARCA4-219ENST00000592604 KIR2DS1A0A191URI9 304 aa12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 MARCH11A6NNE9 402 aa12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 TRGC2P03986 189 aa12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 BCL3P20749 454 aa12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 SRD5A2P31213 254 aa12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 KIR2DS4P43632 304 aa12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 RND2P52198 227 aa12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 FGF12P61328 243 aa12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 KIR2DS1Q14954 304 aa12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 ZNF468Q5VIY5 522 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 FAM90A2PQ658T7 463 aa12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 RPS19BP1Q86WX3 136 aaKnown RBP12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 HIST3H2BBQ8N257 126 aa12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 CISD1Q9NZ45 108 aaKnown RBP12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 SH3BGRL2Q9UJC5 107 aa12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 PGLYRP1O75594 196 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 SLC25A6P12236 298 aa12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 HIST1H1BP16401 226 aaKnown RBP12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 EPHA8P29322 1005 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 MLF1P58340 268 aa12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 PNRC1Q12796 327 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 ABLIM2Q6H8Q1 611 aa12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 BATF2Q8N1L9 274 aa12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 OR10D4PQ8NGN7 298 aa12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 OR10J5Q8NHC4 309 aa12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 ATP23Q9Y6H3 246 aa12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 IGKV1-6A0A0C4DH72 117 aa12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 KIAA1324LA8MWY0 1029 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 TGOLN2O43493 480 aa12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 CD200P41217 278 aa12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 CDPF1Q6NVV7 123 aa12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 PHF7Q9BWX1 381 aaPredicted RBP12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 PRDM13Q9H4Q3 707 aa12.72□□□□□ -0.37
SMARCA4-219ENST00000592604 CCDC163A0A0D9SF12 145 aa12.71□□□□□ -0.37
SMARCA4-219ENST00000592604 PPP1R2P9O14990 202 aa12.71□□□□□ -0.37
SMARCA4-219ENST00000592604 SOD3P08294 240 aa12.71□□□□□ -0.37
SMARCA4-219ENST00000592604 CD81P60033 236 aa12.71□□□□□ -0.37
SMARCA4-219ENST00000592604 MPV17LQ2QL34 196 aa12.71□□□□□ -0.37
SMARCA4-219ENST00000592604 THNSL2Q86YJ6 484 aa12.71□□□□□ -0.37
SMARCA4-219ENST00000592604 ZNF295-AS1Q8N0V1 137 aa12.71□□□□□ -0.37
SMARCA4-219ENST00000592604 ABHD5Q8WTS1 349 aa12.71□□□□□ -0.37
SMARCA4-219ENST00000592604 A0A1B0GU03 582 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms