RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 ABCA11PQ4W5N1 156 aa17.43■□□□□ 0.38
CIRBP-219ENST00000588411 THNSL2Q86YJ6 484 aa17.43■□□□□ 0.38
CIRBP-219ENST00000588411 OR8H3Q8N146 312 aa17.43■□□□□ 0.38
CIRBP-219ENST00000588411 WIPF2Q8TF74 440 aaPredicted RBP17.43■□□□□ 0.38
CIRBP-219ENST00000588411 LEAP2Q969E1 77 aa17.43■□□□□ 0.38
CIRBP-219ENST00000588411 MYDGFQ969H8 173 aa17.43■□□□□ 0.38
CIRBP-219ENST00000588411 CITED2Q99967 270 aaPredicted RBP17.43■□□□□ 0.38
CIRBP-219ENST00000588411 OCSTAMPQ9BR26 566 aa17.43■□□□□ 0.38
CIRBP-219ENST00000588411 FKBP14Q9NWM8 211 aa17.43■□□□□ 0.38
CIRBP-219ENST00000588411 SCN3BQ9NY72 215 aa17.43■□□□□ 0.38
CIRBP-219ENST00000588411 ZNF581Q9P0T4 197 aa17.43■□□□□ 0.38
CIRBP-219ENST00000588411 NOTCH1P46531 2555 aa17.42■□□□□ 0.38
CIRBP-219ENST00000588411 A0A1W2PP11 408 aa17.42■□□□□ 0.38
CIRBP-219ENST00000588411 ANKRD65E5RJM6 399 aa17.42■□□□□ 0.38
CIRBP-219ENST00000588411 AIPO00170 330 aa17.42■□□□□ 0.38
CIRBP-219ENST00000588411 UTF1Q5T230 341 aa17.42■□□□□ 0.38
CIRBP-219ENST00000588411 RNLSQ5VYX0 342 aa17.42■□□□□ 0.38
CIRBP-219ENST00000588411 HIST2H2BDQ6DRA6 164 aa17.42■□□□□ 0.38
CIRBP-219ENST00000588411 CENPVQ7Z7K6 275 aaPredicted RBP17.42■□□□□ 0.38
CIRBP-219ENST00000588411 LYG1Q8N1E2 194 aa17.42■□□□□ 0.38
CIRBP-219ENST00000588411 MS4A15Q8N5U1 240 aa17.42■□□□□ 0.38
CIRBP-219ENST00000588411 OR5AU1Q8NGC0 362 aa17.42■□□□□ 0.38
CIRBP-219ENST00000588411 OR52M1Q8NGK5 317 aa17.42■□□□□ 0.38
CIRBP-219ENST00000588411 OR56B4Q8NH76 319 aa17.42■□□□□ 0.38
CIRBP-219ENST00000588411 ARL11Q969Q4 196 aa17.42■□□□□ 0.38
CIRBP-219ENST00000588411 UQCC2Q9BRT2 126 aa17.42■□□□□ 0.38
CIRBP-219ENST00000588411 MOB4Q9Y3A3 225 aa17.42■□□□□ 0.38
CIRBP-219ENST00000588411 FAM90A10PA6NDY2 464 aa17.41■□□□□ 0.38
CIRBP-219ENST00000588411 FAM90A18PA6NE21 464 aa17.41■□□□□ 0.38
CIRBP-219ENST00000588411 FAM90A16PA6NEW6 464 aa17.41■□□□□ 0.38
CIRBP-219ENST00000588411 FAM90A20PA6NIJ5 464 aa17.41■□□□□ 0.38
CIRBP-219ENST00000588411 FAM90A7PA6NKC0 464 aa17.41■□□□□ 0.38
CIRBP-219ENST00000588411 FAM90A12PA8MX19 464 aa17.41■□□□□ 0.38
CIRBP-219ENST00000588411 FAM90A5PA8MXJ8 464 aa17.41■□□□□ 0.38
CIRBP-219ENST00000588411 FAM90A23PA8MXZ1 464 aa17.41■□□□□ 0.38
CIRBP-219ENST00000588411 SDCBPO00560 298 aaPredicted RBP17.41■□□□□ 0.38
CIRBP-219ENST00000588411 ORC5O43913 435 aa17.41■□□□□ 0.38
CIRBP-219ENST00000588411 CDK1P06493 297 aa17.41■□□□□ 0.38
CIRBP-219ENST00000588411 FAM90A15PP0C7V4 464 aa17.41■□□□□ 0.38
CIRBP-219ENST00000588411 FAM90A13PP0C7W8 464 aa17.41■□□□□ 0.38
CIRBP-219ENST00000588411 FAM90A14PP0C7W9 464 aa17.41■□□□□ 0.38
CIRBP-219ENST00000588411 FAM90A24PP0C7X0 464 aa17.41■□□□□ 0.38
CIRBP-219ENST00000588411 ZNF497Q6ZNH5 498 aa17.41■□□□□ 0.38
CIRBP-219ENST00000588411 CCDC107Q8WV48 283 aa17.41■□□□□ 0.38
CIRBP-219ENST00000588411 R3HDM4Q96D70 268 aa17.41■□□□□ 0.38
CIRBP-219ENST00000588411 RCC2Q9P258 522 aaKnown RBP17.41■□□□□ 0.38
CIRBP-219ENST00000588411 PTGES3LE9PB15 166 aa17.4■□□□□ 0.38
CIRBP-219ENST00000588411 CRTAPO75718 401 aaPredicted RBP17.4■□□□□ 0.38
CIRBP-219ENST00000588411 MT-ND4P03905 459 aa17.4■□□□□ 0.38
CIRBP-219ENST00000588411 LPLP06858 475 aa17.4■□□□□ 0.38
CIRBP-219ENST00000588411 IL3RAP26951 378 aa17.4■□□□□ 0.38
CIRBP-219ENST00000588411 HES1Q14469 280 aa17.4■□□□□ 0.38
CIRBP-219ENST00000588411 TMEM30BQ3MIR4 351 aa17.4■□□□□ 0.38
CIRBP-219ENST00000588411 C9orf152Q5JTZ5 239 aa17.4■□□□□ 0.38
CIRBP-219ENST00000588411 C6orf141Q5SZD1 244 aa17.4■□□□□ 0.38
CIRBP-219ENST00000588411 C6orf183Q5T699 404 aa17.4■□□□□ 0.38
CIRBP-219ENST00000588411 RAB12Q6IQ22 244 aa17.4■□□□□ 0.38
CIRBP-219ENST00000588411 C1QL4Q86Z23 238 aa17.4■□□□□ 0.38
CIRBP-219ENST00000588411 DRAM1Q8N682 238 aa17.4■□□□□ 0.38
CIRBP-219ENST00000588411 SELENOIQ9C0D9 397 aa17.4■□□□□ 0.38
CIRBP-219ENST00000588411 ETAA1Q9NY74 926 aa17.4■□□□□ 0.38
CIRBP-219ENST00000588411 GHRLQ9UBU3 117 aa17.4■□□□□ 0.38
CIRBP-219ENST00000588411 TRAPPC2LQ9UL33 140 aa17.4■□□□□ 0.38
CIRBP-219ENST00000588411 A0A1W2PPI3 338 aa17.39■□□□□ 0.37
CIRBP-219ENST00000588411 FAM90A9PA6NNJ1 464 aa17.39■□□□□ 0.37
CIRBP-219ENST00000588411 C15orf65H3BRN8 121 aa17.39■□□□□ 0.37
CIRBP-219ENST00000588411 PIN1P1O15428 100 aa17.39■□□□□ 0.37
CIRBP-219ENST00000588411 SPINT2O43291 252 aa17.39■□□□□ 0.37
CIRBP-219ENST00000588411 CA11O75493 328 aa17.39■□□□□ 0.37
CIRBP-219ENST00000588411 SNRNP70P08621 437 aaKnown RBP17.39■□□□□ 0.37
CIRBP-219ENST00000588411 MGMTP16455 207 aa17.39■□□□□ 0.37
CIRBP-219ENST00000588411 TMEM11P17152 192 aa17.39■□□□□ 0.37
CIRBP-219ENST00000588411 GABPB1Q06547 395 aaPredicted RBP17.39■□□□□ 0.37
CIRBP-219ENST00000588411 GPR50Q13585 617 aa17.39■□□□□ 0.37
CIRBP-219ENST00000588411 TRAT1Q6PIZ9 186 aa17.39■□□□□ 0.37
CIRBP-219ENST00000588411 C8orf31Q8N9H6 132 aa17.39■□□□□ 0.37
CIRBP-219ENST00000588411 OR4X2Q8NGF9 303 aa17.39■□□□□ 0.37
CIRBP-219ENST00000588411 CST11Q9H112 138 aa17.39■□□□□ 0.37
CIRBP-219ENST00000588411 BANF2Q9H503 90 aa17.39■□□□□ 0.37
CIRBP-219ENST00000588411 PEX16Q9Y5Y5 336 aa17.39■□□□□ 0.37
CIRBP-219ENST00000588411 CCRL2O00421 344 aa17.38■□□□□ 0.37
CIRBP-219ENST00000588411 HSD17B6O14756 317 aa17.38■□□□□ 0.37
CIRBP-219ENST00000588411 GAPDHP04406 335 aaKnown RBP17.38■□□□□ 0.37
CIRBP-219ENST00000588411 GLAP06280 429 aa17.38■□□□□ 0.37
CIRBP-219ENST00000588411 UBBP0CG47 229 aa17.38■□□□□ 0.37
CIRBP-219ENST00000588411 SPHARQ15513 63 aa17.38■□□□□ 0.37
CIRBP-219ENST00000588411 Q3ZCU0 254 aa17.38■□□□□ 0.37
CIRBP-219ENST00000588411 ACSM3Q53FZ2 586 aa17.38■□□□□ 0.37
CIRBP-219ENST00000588411 GFOD1Q9NXC2 390 aa17.38■□□□□ 0.37
CIRBP-219ENST00000588411 A0A1W2PPE3 182 aa17.37■□□□□ 0.37
CIRBP-219ENST00000588411 AMY1AP04745 511 aa17.37■□□□□ 0.37
CIRBP-219ENST00000588411 AMY2AP04746 511 aa17.37■□□□□ 0.37
CIRBP-219ENST00000588411 FUT3P21217 361 aa17.37■□□□□ 0.37
CIRBP-219ENST00000588411 CD83Q01151 205 aa17.37■□□□□ 0.37
CIRBP-219ENST00000588411 ZNF816Q0VGE8 651 aaPredicted RBP17.37■□□□□ 0.37
CIRBP-219ENST00000588411 SYT6Q5T7P8 510 aaPredicted RBP17.37■□□□□ 0.37
CIRBP-219ENST00000588411 LINC00311Q8N616 119 aa17.37■□□□□ 0.37
CIRBP-219ENST00000588411 PHYHIPQ92561 330 aa17.37■□□□□ 0.37
CIRBP-219ENST00000588411 TMED9Q9BVK6 235 aa17.37■□□□□ 0.37
CIRBP-219ENST00000588411 GNG12Q9UBI6 72 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms