RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 DUX4L5P0CJ88 424 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 DUX4L6P0CJ89 424 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 DUX4L7P0CJ90 424 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 SULT1A3P0DMM9 295 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 SULT1A4P0DMN0 295 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 SELLP14151 372 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 RCC1P18754 421 aaPredicted RBP8.51□□□□□ -1.05
APOC1-201ENST00000586638 CXCL3P19876 107 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 AADACP22760 399 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 NFYAP23511 347 aaPredicted RBP8.51□□□□□ -1.05
APOC1-201ENST00000586638 ZBTB25P24278 435 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 CFHR2P36980 270 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 GABRA2P47869 451 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 EIF2B2P49770 351 aaKnown RBP8.51□□□□□ -1.05
APOC1-201ENST00000586638 NKX2-5P52952 324 aaPredicted RBP8.51□□□□□ -1.05
APOC1-201ENST00000586638 PPP1R1AQ13522 171 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 EFNB3Q15768 340 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 GRK1Q15835 563 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 MST1LQ2TV78 715 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 C11orf91Q3C1V1 193 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 ZNF660Q6AZW8 331 aaPredicted RBP8.51□□□□□ -1.05
APOC1-201ENST00000586638 DUX4L9Q6RFH8 374 aaPredicted RBP8.51□□□□□ -1.05
APOC1-201ENST00000586638 Q6ZS49 121 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 PEG10Q86TG7 708 aaKnown RBP8.51□□□□□ -1.05
APOC1-201ENST00000586638 SLC25A42Q86VD7 318 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 MUC20Q8N307 709 aaPredicted RBP8.51□□□□□ -1.05
APOC1-201ENST00000586638 Q8TCH9 128 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 ZNF431Q8TF32 576 aaPredicted RBP8.51□□□□□ -1.05
APOC1-201ENST00000586638 TOMM40LQ969M1 308 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 TMEM230Q96A57 120 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 TMEM204Q9BSN7 226 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 CABLES2Q9BTV7 478 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 RIMS4Q9H426 269 aaPredicted RBP8.51□□□□□ -1.05
APOC1-201ENST00000586638 C5orf66Q9H5L9 145 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 SAP30LQ9HAJ7 183 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 MYOZ1Q9NP98 299 aaPredicted RBP8.51□□□□□ -1.05
APOC1-201ENST00000586638 DLL4Q9NR61 685 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 DECR2Q9NUI1 292 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 DUX4Q9UBX2 424 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 KIF25Q9UIL4 384 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 ZNF222Q9UK12 451 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 GPR132Q9UNW8 380 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 PPP1R3CQ9UQK1 317 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 NPTNQ9Y639 398 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 ROS1P08922 2347 aa8.51□□□□□ -1.05
APOC1-201ENST00000586638 KIAA2026Q5HYC2 2103 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 KIR2DS1A0A191URI9 304 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 CEACAM18A8MTB9 384 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 SNRPGP15A8MWD9 76 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 B9A039 149 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 LHBP01229 141 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 HLA-AP01891 365 aaKnown RBP8.5□□□□□ -1.05
APOC1-201ENST00000586638 AKR1C4P17516 323 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 TNFRSF1AP19438 455 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 LMO1P25800 156 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 FCGR2CP31995 323 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 PRDX2P32119 198 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 KIR2DS4P43632 304 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 TAS2R31P59538 309 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 HERV-K104P61576 105 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 SEC61A1P61619 476 aaKnown RBP8.5□□□□□ -1.05
APOC1-201ENST00000586638 EDDM3AQ14507 147 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 KIR2DS1Q14954 304 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 HMGN3Q15651 99 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 SRSF7Q16629 238 aaKnown RBP eCLIP8.5□□□□□ -1.05
APOC1-201ENST00000586638 C2orf68Q2NKX9 166 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 FAM209AQ5JX71 171 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 STUMQ69YW2 141 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 LYG2Q86SG7 212 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 FAM90A1Q86YD7 464 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 MUC15Q8N387 334 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 TPRX1Q8N7U7 411 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 DEFB108BQ8NET1 73 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 CASTOR1Q8WTX7 329 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 FAM222BQ8WU58 562 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 MBD6Q96DN6 1003 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 KIRREL1Q96J84 757 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 SLC23A1Q9UHI7 598 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 TRAPPC2LQ9UL33 140 aa8.5□□□□□ -1.05
APOC1-201ENST00000586638 C14orf166Q9Y224 244 aaKnown RBP8.5□□□□□ -1.05
APOC1-201ENST00000586638 MAP1AP78559 2803 aaPredicted RBP8.5□□□□□ -1.05
APOC1-201ENST00000586638 DSCAML1Q8TD84 2053 aa8.49□□□□□ -1.05
APOC1-201ENST00000586638 MEX3AA1L020 520 aaKnown RBP8.49□□□□□ -1.05
APOC1-201ENST00000586638 OOEPA6NGQ2 149 aa8.49□□□□□ -1.05
APOC1-201ENST00000586638 A6NNC1 897 aa8.49□□□□□ -1.05
APOC1-201ENST00000586638 H7C1Q1 480 aa8.49□□□□□ -1.05
APOC1-201ENST00000586638 IFNL4K9M1U5 179 aa8.49□□□□□ -1.05
APOC1-201ENST00000586638 GOSR2O14653 212 aa8.49□□□□□ -1.05
APOC1-201ENST00000586638 ZNF737O75373 536 aa8.49□□□□□ -1.05
APOC1-201ENST00000586638 PPYP01298 95 aa8.49□□□□□ -1.05
APOC1-201ENST00000586638 GYPAP02724 150 aa8.49□□□□□ -1.05
APOC1-201ENST00000586638 ZNF728P0DKX0 622 aa8.49□□□□□ -1.05
APOC1-201ENST00000586638 ANXA3P12429 323 aa8.49□□□□□ -1.05
APOC1-201ENST00000586638 IRF2P14316 349 aa8.49□□□□□ -1.05
APOC1-201ENST00000586638 VAMP1P23763 118 aa8.49□□□□□ -1.05
APOC1-201ENST00000586638 CD34P28906 385 aa8.49□□□□□ -1.05
APOC1-201ENST00000586638 GLIPR1P48060 266 aa8.49□□□□□ -1.05
APOC1-201ENST00000586638 SNRPD2P62316 118 aaKnown RBP8.49□□□□□ -1.05
APOC1-201ENST00000586638 AESQ08117 197 aa8.49□□□□□ -1.05
APOC1-201ENST00000586638 DHRS2Q13268 280 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms