RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	IL2RA	P01589	272 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	IGHM	P01871	453 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	EDN2	P20800	178 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	SNU13	P55769	128 aa	Known RBP	10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	FAM3A	P98173	230 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	C19orf35	Q6ZS72	473 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	C6orf201	Q7Z4U5	140 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	C5orf24	Q7Z6I8	188 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	CCDC71L	Q8N9Z2	235 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	OR5L1	Q8NGL2	311 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	OR5H2	Q8NGV7	314 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	RASL10B	Q96S79	203 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	TMEM9B	Q9NQ34	198 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	PLA2G2E	Q9NZK7	142 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	METTL1	Q9UBP6	276 aa	Known RBP	10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	DKK4	Q9UBT3	224 aa		10.04	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	ANGPTL7	O43827	346 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	DBH	P09172	617 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	FAM157C	P0CG43	387 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	FAH	P16930	419 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	BLVRB	P30043	206 aa	Predicted RBP	10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	OPRM1	P35372	400 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	PPT1	P50897	306 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	SSBP1	Q04837	148 aa	Known RBP	10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	HOGA1	Q86XE5	327 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	OR5AS1	Q8N127	324 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	OR2AJ1	Q8NGZ0	328 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	RNF141	Q8WVD5	230 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	TOMM40L	Q969M1	308 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	RTBDN	Q9BSG5	229 aa	Predicted RBP	10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	FLVCR1	Q9Y5Y0	555 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	SVIL	O95425	2214 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	IGKV1-9	A0A0C4DH69	117 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	PRR33	A8MZF0	331 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	XRCC2	O43543	280 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	TK1	P04183	234 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	SFTA3	P0C7M3	94 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	PAX1	P15863	534 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	SEC61G	P60059	68 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	PLPPR5	Q32ZL2	321 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	TMEM176B	Q3YBM2	270 aa	Predicted RBP	10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	C4orf17	Q53FE4	359 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	TMEM128	Q5BJH2	165 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	PEG10	Q86TG7	708 aa	Known RBP	10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	MFSD8	Q8NHS3	518 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	SECTM1	Q8WVN6	248 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	FOXJ2	Q9P0K8	574 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	SS18L2	Q9UHA2	77 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	ADAMTS20	P59510	1910 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	ZNF318	Q5VUA4	2279 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	C20orf202	A1L168	122 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	OR8U8	P0C7N1	319 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	OR8U9	P0C7N5	309 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	ZNF17	P17021	662 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	PDLIM4	P50479	330 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	MMP16	P51512	607 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	DHRS7B	Q6IAN0	325 aa	Predicted RBP	10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	OR2Y1	Q8NGV0	311 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	OR8U1	Q8NH10	309 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	GNRHR2	Q96P88	292 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	CLCC1	Q96S66	551 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	SCNM1	Q9BWG6	230 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063	AMDHD2	Q9Y303	409 aa		10.03	□□□□□ -0.8
CDK5RAP3-231	ENST00000584063		M0R143	59 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	HIST1H1D	P16402	221 aa	Known RBP	10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	CX3CR1	P49238	355 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	DAP3	P51398	398 aa	Known RBP	10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	F2RL1	P55085	397 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	KLF3	P57682	345 aa	Predicted RBP	10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	FXYD4	P59646	89 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	PCOLCE	Q15113	449 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	HAGH	Q16775	308 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	PLA2G2C	Q5R387	149 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	CALHM1	Q8IU99	346 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	ZDHHC22	Q8N966	263 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	OR5D13	Q8NGL4	314 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	OR2V2	Q96R30	315 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	GPHA2	Q96T91	129 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	GPR132	Q9UNW8	380 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	RCL1	Q9Y2P8	373 aa	Known RBP	10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	IGHV1-45	A0A0A0MS14	117 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	OR5H15	A6NDH6	313 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	TMEM14DP	A8MWL7	114 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	ISG15	P05161	165 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	CSNK1A1	P48729	337 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	RPS16	P62249	146 aa	Known RBP	10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	IAH1	Q2TAA2	248 aa	Predicted RBP	10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	HES3	Q5TGS1	186 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	CST9LP1	Q5W188	147 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	DNM1P34	Q6PK57	102 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	LYG1	Q8N1E2	194 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	DDIT4L	Q96D03	193 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	URM1	Q9BTM9	101 aa	Known RBP	10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	TAF9B	Q9HBM6	251 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	RPS10P5	Q9NQ39	176 aa		10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	RCC2	Q9P258	522 aa	Known RBP	10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	NXT1	Q9UKK6	140 aa	Known RBP	10.02	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	MED13	Q9UHV7	2174 aa		10.01	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	DMXL2	Q8TDJ6	3036 aa		10.01	□□□□□ -0.81
CDK5RAP3-231	ENST00000584063	COL5A1	P20908	1838 aa	Predicted RBP	10.01	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms