RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, human

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NF1-222	ENST00000582892	SPEF1	Q9Y4P9	236 aa		6.26	□□□□□ -1.41
NF1-222	ENST00000582892	WNK2	Q9Y3S1	2297 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892		A0A0J9YW62	118 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	OR6C6	A6NF89	314 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892		E7EQL1	145 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	FGF16	O43320	207 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	TPD52L2	O43399	206 aa	Known RBP	6.25	□□□□□ -1.41
NF1-222	ENST00000582892	PMP2	P02689	132 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	RLN2	P04090	185 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	TPT1	P13693	172 aa	Known RBP	6.25	□□□□□ -1.41
NF1-222	ENST00000582892	ZFP36	P26651	326 aa	Known RBP	6.25	□□□□□ -1.41
NF1-222	ENST00000582892	OR3A2	P47893	321 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	SLC6A9	P48067	706 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	ATP1B3	P54709	279 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	DSCR9	P59020	149 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	IL15RA	Q13261	267 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	ARFRP1	Q13795	201 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	RSPO1	Q2MKA7	263 aa	Predicted RBP	6.25	□□□□□ -1.41
NF1-222	ENST00000582892	PDSS1	Q5T2R2	415 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	TMEM42	Q69YG0	159 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	PRSS54	Q6PEW0	395 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	TFAP2E	Q6VUC0	442 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	C17orf107	Q6ZR85	190 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	LHFPL2	Q6ZUX7	228 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	SPERT	Q8NA61	448 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	ADAD2	Q8NCV1	583 aa	Known RBP	6.25	□□□□□ -1.41
NF1-222	ENST00000582892	SLC30A7	Q8NEW0	376 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	OR51T1	Q8NGJ9	327 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	LHFPL5	Q8TAF8	219 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	MARCH1	Q8TCQ1	289 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	TMEM230	Q96A57	120 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	TMEM45B	Q96B21	275 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	ARHGAP5-AS1	Q96IT6	56 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	CXorf58	Q96LI9	332 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	ZNF385A	Q96PM9	386 aa	Known RBP	6.25	□□□□□ -1.41
NF1-222	ENST00000582892	AQP10	Q96PS8	301 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	NKX3-1	Q99801	234 aa	Predicted RBP	6.25	□□□□□ -1.41
NF1-222	ENST00000582892	METTL9	Q9H1A3	318 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	C5orf66	Q9H5L9	145 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	FN3KRP	Q9HA64	309 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	PLSCR4	Q9NRQ2	329 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	TMEM100	Q9NV29	134 aa		6.25	□□□□□ -1.41
NF1-222	ENST00000582892	MYEF2	Q9P2K5	600 aa	Known RBP	6.25	□□□□□ -1.41
NF1-222	ENST00000582892	LOC105371267	A0A1B0GV96	52 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	FAM90A10P	A6NDY2	464 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	FAM90A18P	A6NE21	464 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	FAM90A16P	A6NEW6	464 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	FAM90A20P	A6NIJ5	464 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	FAM90A8P	A6NJQ4	464 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	FAM90A7P	A6NKC0	464 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	ZNF716	A6NP11	495 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	FAM90A22P	A8MWA6	464 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	FAM90A12P	A8MX19	464 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	FAM90A5P	A8MXJ8	464 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	FAM90A23P	A8MXZ1	464 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	TAAR5	O14804	337 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	SMAD9	O15198	467 aa	Known RBP	6.24	□□□□□ -1.41
NF1-222	ENST00000582892	SGCE	O43556	437 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	SYNGR3	O43761	229 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	RAD51D	O75771	328 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	SPDEF	O95238	335 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	OPN1LW	P04000	364 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	CSN2	P05814	226 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	CTSD	P07339	412 aa	Predicted RBP	6.24	□□□□□ -1.41
NF1-222	ENST00000582892	FAM90A15P	P0C7V4	464 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	FAM90A13P	P0C7W8	464 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	FAM90A14P	P0C7W9	464 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	FAM90A24P	P0C7X0	464 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	SLC2A1	P11166	492 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	FCGR2A	P12318	317 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	AKR1C4	P17516	323 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	BLVRB	P30043	206 aa	Predicted RBP	6.24	□□□□□ -1.41
NF1-222	ENST00000582892	SERPINF1	P36955	418 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	OR8B8	Q15620	311 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	UBE2V2	Q15819	145 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	SLC22A6	Q4U2R8	563 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	PHYHD1	Q5SRE7	291 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	AADACL3	Q5VUY0	350 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	CSNK2A3	Q8NEV1	391 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	OR10K1	Q8NGX5	313 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	OR13G1	Q8NGZ3	307 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	OR1F12	Q8NHA8	337 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	OR2V1	Q8NHB1	315 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	TAF15	Q92804	592 aa	Known RBP eCLIP	6.24	□□□□□ -1.41
NF1-222	ENST00000582892	ADGRG7	Q96K78	797 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	C2orf50	Q96LR7	162 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	LINC00052	Q96N35	136 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	RTBDN	Q9BSG5	229 aa	Predicted RBP	6.24	□□□□□ -1.41
NF1-222	ENST00000582892	RNF126	Q9BV68	326 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	ZNF471	Q9BX82	626 aa	Predicted RBP	6.24	□□□□□ -1.41
NF1-222	ENST00000582892	LINC00470	Q9BZP3	86 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	BANF2	Q9H503	90 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	ESM1	Q9NQ30	184 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	TMEM38B	Q9NVV0	291 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	PLEK2	Q9NYT0	353 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	MBD2	Q9UBB5	411 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	ZNF230	Q9UIE0	474 aa	Predicted RBP	6.24	□□□□□ -1.41
NF1-222	ENST00000582892	C14orf166	Q9Y224	244 aa	Known RBP	6.24	□□□□□ -1.41
NF1-222	ENST00000582892	PIGL	Q9Y2B2	252 aa		6.24	□□□□□ -1.41
NF1-222	ENST00000582892	TIMM10B	Q9Y5J6	103 aa		6.24	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms