RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 A0A0A6YYD4 124 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 HMX3A6NHT5 357 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 VWC2LB2RUY7 222 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 PDCD6O75340 191 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 PEX14O75381 377 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 CCNKO75909 580 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 OR7C1O76099 320 aaPredicted RBP8.57□□□□□ -1.04
SS18-221ENST00000582448 NDUFB6O95139 128 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 FSHBP01225 129 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 FUT3P21217 361 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 CALCRP30988 508 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 BTCP35070 178 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 MPV17P39210 176 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 PMELP40967 661 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 FGF12P61328 243 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 MPV17LQ2QL34 196 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 PLAC9Q5JTB6 97 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 ATAD3CQ5T2N8 411 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 BPIFB2Q8N4F0 458 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 OR5H2Q8NGV7 314 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 OR4K15Q8NH41 348 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 CHAC2Q8WUX2 184 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 CCDC107Q8WV48 283 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 EMG1Q92979 244 aaKnown RBP8.57□□□□□ -1.04
SS18-221ENST00000582448 CMSS1Q9BQ75 279 aaKnown RBP8.57□□□□□ -1.04
SS18-221ENST00000582448 BPESC1Q9GZL8 116 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 CHST6Q9GZX3 395 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 OR51I2Q9H344 312 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 ZNF442Q9H7R0 627 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 GLS2Q9UI32 602 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 ALG5Q9Y673 324 aa8.57□□□□□ -1.04
SS18-221ENST00000582448 IGKV1-12A0A0C4DH73 117 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 UBE2QL1A1L167 161 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 FOXI3A8MTJ6 420 aaPredicted RBP8.56□□□□□ -1.04
SS18-221ENST00000582448 ATP6V1G2-DDX39BF2Z307 99 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 NDUFS8O00217 210 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 GEMIN2O14893 280 aaKnown RBP8.56□□□□□ -1.04
SS18-221ENST00000582448 KCNAB3O43448 404 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 SSNA1O43805 119 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 IGKV1D-12P01611 117 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 CD74P04233 296 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 RLN1P04808 185 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 FCER2P06734 321 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 GRPP07492 148 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 SFTPBP07988 381 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 PRKACAP17612 351 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 BCL3P20749 454 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 MPZP25189 248 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 TMEM50BP56557 158 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 ARPC4P59998 168 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 TSPAN5P62079 268 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 RBM39Q14498 530 aaKnown RBP8.56□□□□□ -1.04
SS18-221ENST00000582448 MST1LQ2TV78 715 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 PIGYQ3MUY2 71 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 SCGB2B2Q4G0G5 96 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 NHLRC3Q5JS37 347 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 METTL11BQ5VVY1 283 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 IDO2Q6ZQW0 420 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 C6orf201Q7Z4U5 140 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 GLCCI1Q86VQ1 547 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 HOGA1Q86XE5 327 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 FAM58AQ8N1B3 248 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 ARRDC1Q8N5I2 433 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 Q8NFD4 153 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 BEST4Q8NFU0 473 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 OR51S1Q8NGJ8 323 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 NEK7Q8TDX7 302 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 ST8SIA4Q92187 359 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 SCGB3A2Q96PL1 93 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 GPHA2Q96T91 129 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 ST6GALNAC5Q9BVH7 336 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 MED28Q9H204 178 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 CHMP1AQ9HD42 196 aaPredicted RBP8.56□□□□□ -1.04
SS18-221ENST00000582448 C12orf4Q9NQ89 552 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 ING3Q9NXR8 418 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 KCNK7Q9Y2U2 307 aa8.56□□□□□ -1.04
SS18-221ENST00000582448 MCRIP1C9JLW8 97 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 M0QYG6 137 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 ARPC1BO15143 372 aaKnown RBP8.55□□□□□ -1.04
SS18-221ENST00000582448 SSX5O60225 188 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 NXPH2O95156 264 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 VENTXO95231 258 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 CSN2P05814 226 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 GLAP06280 429 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 ZNF250P15622 560 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 TNFSF4P23510 183 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 DTYMKP23919 212 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 CHATP28329 748 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 SNU13P55769 128 aaKnown RBP8.55□□□□□ -1.04
SS18-221ENST00000582448 SNRPD2P62316 118 aaKnown RBP8.55□□□□□ -1.04
SS18-221ENST00000582448 CBX3Q13185 183 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 IL13RA2Q14627 380 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 TMEM255AQ5JRV8 349 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 FAAP20Q6NZ36 180 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 GVQW1Q8N7I0 195 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 C3orf56Q8N813 242 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 SCCPDHQ8NBX0 429 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 NUP37Q8NFH4 326 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 OR10AD1Q8NGE0 317 aa8.55□□□□□ -1.04
SS18-221ENST00000582448 GIMAP1Q8WWP7 306 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms