RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	MUL1	Q969V5	352 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	RPE	Q96AT9	228 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	ORAI1	Q96D31	301 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	RBM14	Q96PK6	669 aa	Known RBP	10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	WNT10A	Q9GZT5	417 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	CST11	Q9H112	138 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	DUSP21	Q9H596	190 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	ING3	Q9NXR8	418 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	PSG11	Q9UQ72	335 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	LSM2	Q9Y333	95 aa	Known RBP	10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	SIGLEC9	Q9Y336	463 aa		10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	TET2	Q6N021	2002 aa	Predicted RBP	10.1	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	PNMA8C	A0A1B0GUJ8	204 aa		10.09	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	MAGEA13P	A6NCF6	341 aa		10.09	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	FAM90A9P	A6NNJ1	464 aa		10.09	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	PIN1P1	O15428	100 aa		10.09	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	PEX14	O75381	377 aa		10.09	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	SC5D	O75845	299 aa		10.09	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	OR2F2	O95006	317 aa		10.09	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	MT-ND4	P03905	459 aa		10.09	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	MAS1	P04201	325 aa		10.09	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	FUT3	P21217	361 aa		10.09	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	PSMA1	P25786	263 aa	Known RBP	10.09	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	AQP4	P55087	323 aa		10.09	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	EMX1	Q04741	257 aa	Predicted RBP	10.09	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	IRF3	Q14653	427 aa		10.09	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	ACSM3	Q53FZ2	586 aa		10.09	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	ATAD3C	Q5T2N8	411 aa		10.09	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	GLT8D1	Q68CQ7	371 aa		10.09	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	BAIAP2L2	Q6UXY1	529 aa		10.09	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	LINC00311	Q8N616	119 aa		10.09	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	NEK7	Q8TDX7	302 aa		10.09	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	WIPF2	Q8TF74	440 aa	Predicted RBP	10.09	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	NRG4	Q8WWG1	115 aa		10.09	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708	TOMM40L	Q969M1	308 aa		10.09	□□□□□ -0.79
CDK5RAP3-222	ENST00000581708		A0A1W2PPK0	400 aa		10.08	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	VSIG10L2	P0DP72	767 aa		10.08	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	CD37	P11049	281 aa		10.08	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	MGMT	P16455	207 aa		10.08	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	SSTR5	P35346	364 aa		10.08	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	TPBG	Q13641	420 aa		10.08	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	ARSJ	Q5FYB0	599 aa	Predicted RBP	10.08	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	C1orf100	Q5SVJ3	147 aa		10.08	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	C6orf183	Q5T699	404 aa		10.08	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	STEAP3	Q658P3	488 aa		10.08	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	RAB12	Q6IQ22	244 aa		10.08	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	UFD1	Q92890	307 aa		10.08	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708		Q96M66	194 aa		10.08	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	OCSTAMP	Q9BR26	566 aa		10.08	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708		A0A1W2PP11	408 aa		10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	FAM172BP	A6NC97	362 aa		10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	C15orf65	H3BRN8	121 aa		10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	AIP	O00170	330 aa		10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	SPINT2	O43291	252 aa		10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	RGS10	O43665	173 aa		10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	FBXO24	O75426	580 aa		10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	CRTAP	O75718	401 aa	Predicted RBP	10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	UCHL1	P09936	223 aa		10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	SRM	P19623	302 aa		10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	IL3RA	P26951	378 aa		10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	VDAC2	P45880	294 aa	Predicted RBP	10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	BLCAP	P62952	87 aa		10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	ZNF816	Q0VGE8	651 aa	Predicted RBP	10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	HABP2	Q14520	560 aa	Predicted RBP	10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	MED22	Q15528	200 aa		10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	PRSS48	Q7RTY5	328 aa		10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	NDUFA11	Q86Y39	141 aa		10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	OR10X1	Q8NGY0	326 aa		10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	RFESD	Q8TAC1	157 aa		10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	ARL11	Q969Q4	196 aa		10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	OR5M11	Q96RB7	305 aa		10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	SLC25A33	Q9BSK2	321 aa		10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	SELENOI	Q9C0D9	397 aa		10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	ETAA1	Q9NY74	926 aa		10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	BLOC1S6	Q9UL45	172 aa		10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	LRRC42	Q9Y546	428 aa		10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	PEX16	Q9Y5Y5	336 aa		10.07	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	CCRL2	O00421	344 aa		10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	SDCBP	O00560	298 aa	Predicted RBP	10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	TXNL1	O43396	289 aa		10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	PDCD6	O75340	191 aa		10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	ARL6IP5	O75915	188 aa		10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	TSPAN15	O95858	294 aa		10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	BPNT1	O95861	308 aa		10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	OPN1MW	P04001	364 aa		10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	GAPDH	P04406	335 aa	Known RBP	10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	LPL	P06858	475 aa		10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	OPN1MW2	P0DN77	364 aa		10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	OPN1MW3	P0DN78	364 aa		10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	JUNB	P17275	347 aa	Predicted RBP	10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	CRHBP	P24387	322 aa		10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	LOXL3	P58215	753 aa		10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	MLLT11	Q13015	90 aa	Predicted RBP	10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	HSD17B12	Q53GQ0	312 aa		10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	RBM48	Q5RL73	367 aa	Known RBP	10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	CEACAM19	Q7Z692	300 aa		10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	LRRTM1	Q86UE6	522 aa		10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	TMEM104	Q8NE00	496 aa		10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	KCNG3	Q8TAE7	436 aa		10.06	□□□□□ -0.8
CDK5RAP3-222	ENST00000581708	TMED9	Q9BVK6	235 aa		10.06	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms