RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 NDUFB3O43676 98 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 ENSAO43768 121 aaKnown RBP3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 SSX5O60225 188 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 TMEM127O75204 238 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 ZNF780AO75290 641 aaPredicted RBP3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 PDCD6O75340 191 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 CRLF1O75462 422 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 CRTAPO75718 401 aaPredicted RBP3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 MPIG6BO95866 241 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 ECDO95905 644 aaPredicted RBP3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 TGFAP01135 160 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 RBP4P02753 201 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 MT-ND4P03905 459 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 GLAP06280 429 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 EIF4EP06730 217 aaKnown RBP3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 GTF2F2P13984 249 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 ARSBP15848 533 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 GATA3P23771 443 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 MYL9P24844 172 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 CD34P28906 385 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 GABRA2P47869 451 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 CAPZA1P52907 286 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 TMBIM6P55061 237 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 LOXL3P58215 753 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 PRB3Q04118 309 aaPredicted RBP3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 MXD1Q05195 221 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 MEF2CQ06413 473 aaPredicted RBP3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 AESQ08117 197 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 DYNC1I2Q13409 638 aaKnown RBP3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 GPR176Q14439 515 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 ATXN7L3Q14CW9 347 aaPredicted RBP3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 RSU1Q15404 277 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 HMGN3Q15651 99 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 KCNJ8Q15842 424 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 TIMM50Q3ZCQ8 353 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 ZNF260Q3ZCT1 412 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 FAM120AOSQ5T036 256 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 SLC35E4Q6ICL7 350 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 RAB12Q6IQ22 244 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 C1orf122Q6ZSJ8 110 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 IL17RELQ6ZVW7 336 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 Q71RC1 249 aaPredicted RBP3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 NLRC3Q7RTR2 1065 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 C6orf201Q7Z4U5 140 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 GPR141Q7Z602 305 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 CLVS1Q8IUQ0 354 aaPredicted RBP3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 BPIFB2Q8N4F0 458 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 PNLDC1Q8NA58 520 aaKnown RBP3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 ZNF439Q8NDP4 499 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 TMEM185AQ8NFB2 350 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 OR4M1Q8NGD0 313 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 OR13A1Q8NGR1 328 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 KCNG3Q8TAE7 436 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 ZNF596Q8TC21 504 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 MRPL30Q8TCC3 161 aaKnown RBP3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 NTN5Q8WTR8 489 aaPredicted RBP3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 ISOC1Q96CN7 298 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 ZNF48Q96MX3 618 aaPredicted RBP3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 WDFY2Q96P53 400 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 GPER1Q99527 375 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 HDHD3Q9BSH5 251 aaPredicted RBP3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 DPCDQ9BVM2 203 aaPredicted RBP3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 TMEM59Q9BXS4 323 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 SELENOIQ9C0D9 397 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 SLITRK2Q9H156 845 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 ABCG5Q9H222 651 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 DCSTAMPQ9H295 470 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 NEK6Q9HC98 313 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 VCX3AQ9NNX9 186 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 EXOSC4Q9NPD3 245 aaKnown RBP3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 KIF25Q9UIL4 384 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 HSF4Q9ULV5 492 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 ANAPC10Q9UM13 185 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 ING4Q9UNL4 249 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 KPTNQ9Y664 436 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 LINC00312Q9Y6C7 94 aa3.08□□□□□ -1.92
SMARCE1-215ENST00000578995 DNHD1Q96M86 4753 aa3.07□□□□□ -1.92
SMARCE1-215ENST00000578995 TRAV39A0A0B4J263 110 aa3.07□□□□□ -1.92
SMARCE1-215ENST00000578995 IGKV1-6A0A0C4DH72 117 aa3.07□□□□□ -1.92
SMARCE1-215ENST00000578995 A0A0G2JMP0 313 aa3.07□□□□□ -1.92
SMARCE1-215ENST00000578995 A0A0X1KG70 313 aa3.07□□□□□ -1.92
SMARCE1-215ENST00000578995 DPPA5A6NC42 116 aa3.07□□□□□ -1.92
SMARCE1-215ENST00000578995 C12orf77C9JDV5 145 aa3.07□□□□□ -1.92
SMARCE1-215ENST00000578995 LY6LH3BQJ8 138 aa3.07□□□□□ -1.92
SMARCE1-215ENST00000578995 ZNF701M0R085 212 aaPredicted RBP3.07□□□□□ -1.92
SMARCE1-215ENST00000578995 F2RL2O00254 374 aa3.07□□□□□ -1.92
SMARCE1-215ENST00000578995 HSPB6O14558 160 aa3.07□□□□□ -1.92
SMARCE1-215ENST00000578995 DEGS1O15121 323 aa3.07□□□□□ -1.92
SMARCE1-215ENST00000578995 CA11O75493 328 aa3.07□□□□□ -1.92
SMARCE1-215ENST00000578995 OR7C1O76099 320 aaPredicted RBP3.07□□□□□ -1.92
SMARCE1-215ENST00000578995 NUDT3O95989 172 aa3.07□□□□□ -1.92
SMARCE1-215ENST00000578995 IGLV1-47P01700 117 aa3.07□□□□□ -1.92
SMARCE1-215ENST00000578995 HLA-DQB1P01920 261 aa3.07□□□□□ -1.92
SMARCE1-215ENST00000578995 LIPFP07098 398 aa3.07□□□□□ -1.92
SMARCE1-215ENST00000578995 MELTFP08582 738 aa3.07□□□□□ -1.92
SMARCE1-215ENST00000578995 IGHV1-8P0DP01 117 aa3.07□□□□□ -1.92
SMARCE1-215ENST00000578995 ZNF44P15621 663 aa3.07□□□□□ -1.92
SMARCE1-215ENST00000578995 HIST1H1DP16402 221 aaKnown RBP3.07□□□□□ -1.92
SMARCE1-215ENST00000578995 RCC1P18754 421 aaPredicted RBP3.07□□□□□ -1.92
SMARCE1-215ENST00000578995 FUT3P21217 361 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms