RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 MPPED1O15442 326 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 RGS10O43665 173 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 NOL3O60936 208 aaKnown RBP4.95□□□□□ -1.62
NUP88-212ENST00000576708 OR2H2O95918 312 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 SERPINA3P01011 423 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 IGHV3-7P01780 117 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 UBCP0CG48 685 aaKnown RBP4.95□□□□□ -1.62
NUP88-212ENST00000576708 CDK2P24941 298 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 HTR1DP28221 377 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 RBP2P50120 134 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 GABPB1Q06547 395 aaPredicted RBP4.95□□□□□ -1.62
NUP88-212ENST00000576708 PDZK1IP1Q13113 114 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 ZNF146Q15072 292 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 MINOS1Q5TGZ0 78 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 Q6P435 159 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 FAM220AQ7Z4H9 259 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 ABHD12Q8N2K0 398 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 DNAAF1Q8NEP3 725 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 OR4F17Q8NGA8 305 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 OR8J1Q8NGP2 316 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 OR13C9Q8NGT0 318 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 PP6455Q8WZ26 134 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 LEAP2Q969E1 77 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 RNFT2Q96EX2 444 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 COQ2Q96H96 371 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 OR4F4Q96R69 305 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 BCL7BQ9BQE9 202 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 GABARAPL3Q9BY60 117 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 PPIL3Q9H2H8 161 aaKnown RBP4.95□□□□□ -1.62
NUP88-212ENST00000576708 EXOSC4Q9NPD3 245 aaKnown RBP4.95□□□□□ -1.62
NUP88-212ENST00000576708 NECAP2Q9NVZ3 263 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 UBE2J1Q9Y385 318 aaPredicted RBP4.95□□□□□ -1.62
NUP88-212ENST00000576708 MINOS1-NBL1R4GNA1 71 aa4.95□□□□□ -1.62
NUP88-212ENST00000576708 TRGV10A0A0A0MS01 117 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 TRAV39A0A0B4J263 110 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 TCRBV4S1A1TA0A5B7 111 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 DAPL1A0PJW8 107 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 ODAMA1E959 279 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 OR4C45A6NMZ5 311 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 E9PI62 339 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 LY6LH3BQJ8 138 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 J3QLW9 94 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 J3QRE1 110 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 K7EIL1 84 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 HSPB6O14558 160 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 SH2D1BO14796 132 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 XPNPEP2O43895 674 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 CYB5AP00167 134 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 IGLV1-47P01700 117 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 HTR1AP08908 422 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 ZNF44P15621 663 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 ZNF19P17023 458 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 PRKACBP22694 351 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 NFYBP25208 207 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 ERP29P30040 261 aaKnown RBP4.94□□□□□ -1.62
NUP88-212ENST00000576708 OR3A4PP47883 348 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 KRTAP10-11P60412 298 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 B2MP61769 119 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 IL18R1Q13478 541 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 DIAPH2-AS1Q14236 149 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 RBM39Q14498 530 aaKnown RBP4.94□□□□□ -1.62
NUP88-212ENST00000576708 KPNB1Q14974 876 aaKnown RBP4.94□□□□□ -1.62
NUP88-212ENST00000576708 ATXN7L3Q14CW9 347 aaPredicted RBP4.94□□□□□ -1.62
NUP88-212ENST00000576708 LTC4SQ16873 150 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 C17orf58Q2M2W7 97 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 ABCA11PQ4W5N1 156 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 C9orf152Q5JTZ5 239 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 SPIN3Q5JUX0 258 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 TMEM244Q5VVB8 128 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 C1orf146Q5VVC0 180 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 LPCAT4Q643R3 524 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 ZNF600Q6ZNG1 722 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 UTS2BQ765I0 119 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 CENPVQ7Z7K6 275 aaPredicted RBP4.94□□□□□ -1.62
NUP88-212ENST00000576708 LHFPL3Q86UP9 236 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 Q8IYB0 196 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 ENTHD1Q8IYW4 607 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 SPARTQ8N0X7 666 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 RNF152Q8N8N0 203 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 CCDC54Q8NEL0 328 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 WFDC9Q8NEX5 89 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 OR13C3Q8NGS6 347 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 PYDC1Q8WXC3 89 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 STMN2Q93045 179 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 RFKQ969G6 155 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 MYDGFQ969H8 173 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 RBMXL1Q96E39 390 aaKnown RBP4.94□□□□□ -1.62
NUP88-212ENST00000576708 PELI1Q96FA3 418 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 CENPNQ96H22 339 aaPredicted RBP4.94□□□□□ -1.62
NUP88-212ENST00000576708 C4orf36Q96KX1 117 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 OPALINQ96PE5 141 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 NR1H4Q96RI1 486 aaPredicted RBP4.94□□□□□ -1.62
NUP88-212ENST00000576708 MBOAT4Q96T53 435 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 SLC25A33Q9BSK2 321 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 ISG20L2Q9H9L3 353 aaKnown RBP4.94□□□□□ -1.62
NUP88-212ENST00000576708 SEBOXQ9HB31 216 aaPredicted RBP4.94□□□□□ -1.62
NUP88-212ENST00000576708 NEK6Q9HC98 313 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 INPP5EQ9NRR6 644 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 ZNF581Q9P0T4 197 aa4.94□□□□□ -1.62
NUP88-212ENST00000576708 DPM3Q9P2X0 92 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms