RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 LINC00854A0A1B0GVQ3 168 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 FAM240BA0A1B0GVZ2 78 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 MEIOCA2RUB1 952 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 C7orf66A4D0T2 115 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 NAP1L6A6NFF2 107 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 ENSAO43768 121 aaKnown RBP6.49□□□□□ -1.37
CCDC40-215ENST00000576033 CYB5AP00167 134 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 CHRM2P08172 466 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 PPIAL4GP0DN37 164 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 PTHLHP12272 177 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 ZNF44P15621 663 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 SRD5A1P18405 259 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 HLA-DMAP28067 261 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 SRP14P37108 136 aaKnown RBP6.49□□□□□ -1.37
CCDC40-215ENST00000576033 GLIPR1P48060 266 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 EDDM3BP56851 147 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 RBM11P57052 281 aaKnown RBP6.49□□□□□ -1.37
CCDC40-215ENST00000576033 AP3S2P59780 193 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 AESQ08117 197 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 ZNF146Q15072 292 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 RSU1Q15404 277 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 GRK1Q15835 563 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 TAF9Q16594 264 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 CHRFAM7AQ494W8 412 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 ZNF57Q68EA5 555 aaPredicted RBP6.49□□□□□ -1.37
CCDC40-215ENST00000576033 ZNF782Q6ZMW2 699 aaPredicted RBP6.49□□□□□ -1.37
CCDC40-215ENST00000576033 TOMM5Q8N4H5 51 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 Q8NFD4 153 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 KCNG3Q8TAE7 436 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 C17orf50Q8WW18 174 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 FCAMRQ8WWV6 532 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 ZNF48Q96MX3 618 aaPredicted RBP6.49□□□□□ -1.37
CCDC40-215ENST00000576033 DUX5Q96PT3 197 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 BEX2Q9BXY8 128 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 ATG5Q9H1Y0 275 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 HRASLSQ9HDD0 168 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 IL36GQ9NZH8 169 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 ZNRD1Q9P1U0 126 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 KLK11Q9UBX7 282 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 ZNF69Q9UC07 566 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 AUP1Q9Y679 476 aa6.49□□□□□ -1.37
CCDC40-215ENST00000576033 TENM1Q9UKZ4 2725 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 METTL21EPA6NDL7 271 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 RNASEK-C17orf49H0YIS7 233 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 K7N7A8 449 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 MFNGO00587 321 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 NDUFA2O43678 99 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 CA11O75493 328 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 CRTAPO75718 401 aaPredicted RBP6.48□□□□□ -1.37
CCDC40-215ENST00000576033 MMP23AO75900 390 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 MPIG6BO95866 241 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 CD74P04233 296 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 LPLP06858 475 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 GSTT2BP0CG30 244 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 EPHA1P21709 976 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 PRSS3P35030 304 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 INPP1P49441 399 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 NPY4RP50391 375 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 MECP2P51608 486 aaKnown RBP6.48□□□□□ -1.37
CCDC40-215ENST00000576033 DLX6P56179 175 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 RPS27AP62979 156 aaKnown RBP6.48□□□□□ -1.37
CCDC40-215ENST00000576033 GUCA2AQ02747 115 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 CD300CQ08708 224 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 FAM189A2Q15884 450 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 KIAA2026Q5HYC2 2103 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 PRAMEF5Q5TYX0 476 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 TMEM200BQ69YZ2 307 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 SIGIRRQ6IA17 410 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 HCP5Q6MZN7 132 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 PLET1Q6UQ28 207 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 BTNL3Q6UXE8 466 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 Q6ZPA2 131 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 SAXO1Q8IYX7 474 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 OSR2Q8N2R0 312 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 ZNF561Q8N587 486 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 C11orf42Q8N5U0 333 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 PNLDC1Q8NA58 520 aaKnown RBP6.48□□□□□ -1.37
CCDC40-215ENST00000576033 ZSCAN4Q8NAM6 433 aaPredicted RBP6.48□□□□□ -1.37
CCDC40-215ENST00000576033 PXT1Q8NFP0 134 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 OR10R2Q8NGX6 335 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 C8orf46Q8TAG6 207 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 LHX4Q969G2 390 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 SELENOIQ9C0D9 397 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 DNTTIP1Q9H147 329 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 METTL9Q9H1A3 318 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 DPAGT1Q9H3H5 408 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 ESM1Q9NQ30 184 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 TMEM160Q9NX00 188 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 ETAA1Q9NY74 926 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 TAS2R8Q9NYW2 309 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 CDC42EP3Q9UKI2 254 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 ST3GAL6Q9Y274 331 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 NUBP2Q9Y5Y2 271 aa6.48□□□□□ -1.37
CCDC40-215ENST00000576033 CENPVL3A0A0U1RRI6 287 aa6.47□□□□□ -1.37
CCDC40-215ENST00000576033 HMX3A6NHT5 357 aa6.47□□□□□ -1.37
CCDC40-215ENST00000576033 CENPXA8MT69 81 aa6.47□□□□□ -1.37
CCDC40-215ENST00000576033 INMT-MINDY4F8WBC2 141 aa6.47□□□□□ -1.37
CCDC40-215ENST00000576033 BOLA2-SMG1P6H3BVE0 249 aa6.47□□□□□ -1.37
CCDC40-215ENST00000576033 DEGS1O15121 323 aa6.47□□□□□ -1.37
CCDC40-215ENST00000576033 RBBP9O75884 186 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms