RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 APOA1P02647 267 aa7.02□□□□□ -1.29
NUP88-211ENST00000575976 RCC1P18754 421 aaPredicted RBP7.02□□□□□ -1.29
NUP88-211ENST00000575976 ELK1P19419 428 aa7.02□□□□□ -1.29
NUP88-211ENST00000575976 PRTN3P24158 256 aa7.02□□□□□ -1.29
NUP88-211ENST00000575976 CDK2P24941 298 aa7.02□□□□□ -1.29
NUP88-211ENST00000575976 GDNFP39905 211 aa7.02□□□□□ -1.29
NUP88-211ENST00000575976 GLP1RP43220 463 aa7.02□□□□□ -1.29
NUP88-211ENST00000575976 ARFRP1Q13795 201 aa7.02□□□□□ -1.29
NUP88-211ENST00000575976 KLF17Q5JT82 389 aaPredicted RBP7.02□□□□□ -1.29
NUP88-211ENST00000575976 FAM120AOSQ5T036 256 aa7.02□□□□□ -1.29
NUP88-211ENST00000575976 Q6ZPA2 131 aa7.02□□□□□ -1.29
NUP88-211ENST00000575976 C1orf122Q6ZSJ8 110 aa7.02□□□□□ -1.29
NUP88-211ENST00000575976 VMO1Q7Z5L0 202 aa7.02□□□□□ -1.29
NUP88-211ENST00000575976 C5orf24Q7Z6I8 188 aa7.02□□□□□ -1.29
NUP88-211ENST00000575976 ZNF565Q8N9K5 539 aa7.02□□□□□ -1.29
NUP88-211ENST00000575976 MCFD2Q8NI22 146 aa7.02□□□□□ -1.29
NUP88-211ENST00000575976 UPRTQ96BW1 309 aa7.02□□□□□ -1.29
NUP88-211ENST00000575976 NXF2Q9GZY0 626 aaKnown RBP7.02□□□□□ -1.29
NUP88-211ENST00000575976 CHMP1AQ9HD42 196 aaPredicted RBP7.02□□□□□ -1.29
NUP88-211ENST00000575976 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.02□□□□□ -1.29
NUP88-211ENST00000575976 MBNL3Q9NUK0 354 aaKnown RBP7.02□□□□□ -1.29
NUP88-211ENST00000575976 TMEM160Q9NX00 188 aa7.02□□□□□ -1.29
NUP88-211ENST00000575976 CALYQ9NYX4 217 aa7.02□□□□□ -1.29
NUP88-211ENST00000575976 FLNAP21333 2647 aaKnown RBP7.01□□□□□ -1.29
NUP88-211ENST00000575976 IGHV3OR16-10A0A075B7F0 116 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 A0A0A6YYH2 397 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 TRAV40A0A0B4J280 105 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 KBTBD11-OT1A0A1B0GTJ5 212 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 hCG_1809904A0A1W2PP81 198 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 A0A1W2PPE2 198 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 A0A1W2PR64 198 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 A0A1W2PRV1 198 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 TMEM235A6NFC5 223 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 A6NJ64 397 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 SERPINE3A8MV23 424 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 NPIPB11E5RHQ5 1161 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 C15orf65H3BRN8 121 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 RGS5O15539 181 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 XRCC3O43542 346 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 PEX14O75381 377 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 GSTP1P09211 210 aaKnown RBP7.01□□□□□ -1.29
NUP88-211ENST00000575976 CD3GP09693 182 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 IGHV1-8P0DP01 117 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 PTHLHP12272 177 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 GZMHP20718 246 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 OMGP23515 440 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 SSTR5P35346 364 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 TAS2R20P59543 309 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 KLRD1Q13241 179 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 MADCAM1Q13477 382 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 ARL6IP1Q15041 203 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 LTC4SQ16873 150 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 PRAMEF5Q5TYX0 476 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 HACD4Q5VWC8 232 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 ZNF880Q6PDB4 577 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 BAIAP2L2Q6UXY1 529 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 ZNF782Q6ZMW2 699 aaPredicted RBP7.01□□□□□ -1.29
NUP88-211ENST00000575976 LAX1Q8IWV1 398 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 RFESDQ8TAC1 157 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 UBALD1Q8TB05 177 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 SETD6Q8TBK2 473 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 TNFRSF14Q92956 283 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 LHX4Q969G2 390 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 ARL11Q969Q4 196 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 C6orf62Q9GZU0 229 aaPredicted RBP7.01□□□□□ -1.29
NUP88-211ENST00000575976 GAL3ST2Q9H3Q3 398 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 RIMS4Q9H426 269 aaPredicted RBP7.01□□□□□ -1.29
NUP88-211ENST00000575976 AUNIPQ9H7T9 357 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 METTL8Q9H825 291 aaKnown RBP7.01□□□□□ -1.29
NUP88-211ENST00000575976 UNKLQ9H9P5 680 aaKnown RBP7.01□□□□□ -1.29
NUP88-211ENST00000575976 BATF3Q9NR55 127 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 IDI2-AS1Q9NZ38 188 aa7.01□□□□□ -1.29
NUP88-211ENST00000575976 TRBV6-6A0A0A6YYG2 114 aa7□□□□□ -1.29
NUP88-211ENST00000575976 CENPVL3A0A0U1RRI6 287 aa7□□□□□ -1.29
NUP88-211ENST00000575976 A0A1W2PRD5 423 aa7□□□□□ -1.29
NUP88-211ENST00000575976 A0A1W2PRF3 423 aa7□□□□□ -1.29
NUP88-211ENST00000575976 A0A1W2PRM7 423 aa7□□□□□ -1.29
NUP88-211ENST00000575976 C12orf77C9JDV5 145 aa7□□□□□ -1.29
NUP88-211ENST00000575976 RNASEK-C17orf49H0YIS7 233 aa7□□□□□ -1.29
NUP88-211ENST00000575976 ORC5O43913 435 aa7□□□□□ -1.29
NUP88-211ENST00000575976 SSX5O60225 188 aa7□□□□□ -1.29
NUP88-211ENST00000575976 CLPXO76031 633 aa7□□□□□ -1.29
NUP88-211ENST00000575976 FSHBP01225 129 aa7□□□□□ -1.29
NUP88-211ENST00000575976 HLA-DQB1P01920 261 aa7□□□□□ -1.29
NUP88-211ENST00000575976 RBP4P02753 201 aa7□□□□□ -1.29
NUP88-211ENST00000575976 MELTFP08582 738 aa7□□□□□ -1.29
NUP88-211ENST00000575976 FCGR3AP08637 254 aa7□□□□□ -1.29
NUP88-211ENST00000575976 IGHV4-38-2P0DP08 117 aa7□□□□□ -1.29
NUP88-211ENST00000575976 SRP14P37108 136 aaKnown RBP7□□□□□ -1.29
NUP88-211ENST00000575976 GNG2P59768 71 aa7□□□□□ -1.29
NUP88-211ENST00000575976 MRPS15P82914 257 aaKnown RBP7□□□□□ -1.29
NUP88-211ENST00000575976 HMGN3Q15651 99 aa7□□□□□ -1.29
NUP88-211ENST00000575976 PNLIPRP3Q17RR3 467 aa7□□□□□ -1.29
NUP88-211ENST00000575976 TMEM69Q5SWH9 247 aa7□□□□□ -1.29
NUP88-211ENST00000575976 C6orf183Q5T699 404 aa7□□□□□ -1.29
NUP88-211ENST00000575976 HCP5Q6MZN7 132 aa7□□□□□ -1.29
NUP88-211ENST00000575976 FAM53AQ6NSI3 398 aaPredicted RBP7□□□□□ -1.29
NUP88-211ENST00000575976 HEPN1Q6WQI6 88 aa7□□□□□ -1.29
NUP88-211ENST00000575976 PDZD9Q8IXQ8 264 aa7□□□□□ -1.29
NUP88-211ENST00000575976 PRR18Q8N4B5 295 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms