RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 Q6ZR03 302 aa11.88□□□□□ -0.51
VPS33B-208ENST00000574755 HSD17B13Q7Z5P4 300 aaPredicted RBP11.88□□□□□ -0.51
VPS33B-208ENST00000574755 TMED6Q8WW62 240 aa11.88□□□□□ -0.51
VPS33B-208ENST00000574755 S100PBPQ96BU1 408 aa11.88□□□□□ -0.51
VPS33B-208ENST00000574755 CABLES2Q9BTV7 478 aa11.88□□□□□ -0.51
VPS33B-208ENST00000574755 HES4Q9HCC6 221 aa11.88□□□□□ -0.51
VPS33B-208ENST00000574755 TAAR5O14804 337 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 TNFSF12O43508 249 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 FGF2P09038 288 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 ACAA1P09110 424 aaPredicted RBP11.87□□□□□ -0.51
VPS33B-208ENST00000574755 TIMM23BQ5SRD1 257 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 ZNF324BQ6AW86 544 aaPredicted RBP11.87□□□□□ -0.51
VPS33B-208ENST00000574755 C11orf53Q8IXP5 236 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 C1orf174Q8IYL3 243 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 H1FOOQ8IZA3 346 aaPredicted RBP11.87□□□□□ -0.51
VPS33B-208ENST00000574755 FAM169BQ8N8A8 192 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 BVESQ8NE79 360 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 ABHD17AQ96GS6 310 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 USB1Q9BQ65 265 aaKnown RBP11.87□□□□□ -0.51
VPS33B-208ENST00000574755 BARX1Q9HBU1 254 aaPredicted RBP11.87□□□□□ -0.51
VPS33B-208ENST00000574755 UFSP2Q9NUQ7 469 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 TAAR3PQ9P1P4 343 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 OR1A1Q9P1Q5 309 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 ERRFI1Q9UJM3 462 aaPredicted RBP11.87□□□□□ -0.51
VPS33B-208ENST00000574755 WASF3Q9UPY6 502 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 A8MXK9 166 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 E5RGE8 158 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 WNT9BO14905 357 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 ZP3P21754 424 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 S100GP29377 79 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 SPERTQ8NA61 448 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 TMEM56Q96MV1 263 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 LINC00052Q96N35 136 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 ZFP57Q9NU63 452 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 GLS2Q9UI32 602 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 NSG2Q9Y328 171 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 TMEM56-RWDD3S4R434 201 aa11.87□□□□□ -0.51
VPS33B-208ENST00000574755 M0R1B8 84 aa11.86□□□□□ -0.51
VPS33B-208ENST00000574755 LGALS8O00214 317 aa11.86□□□□□ -0.51
VPS33B-208ENST00000574755 HSPA12AO43301 675 aa11.86□□□□□ -0.51
VPS33B-208ENST00000574755 HOXA4Q00056 320 aaPredicted RBP11.86□□□□□ -0.51
VPS33B-208ENST00000574755 WDR82Q6UXN9 313 aa11.86□□□□□ -0.51
VPS33B-208ENST00000574755 FAM57AQ8TBR7 257 aa11.86□□□□□ -0.51
VPS33B-208ENST00000574755 PLEKHA2Q9HB19 425 aa11.86□□□□□ -0.51
VPS33B-208ENST00000574755 TAS2R3Q9NYW6 316 aa11.86□□□□□ -0.51
VPS33B-208ENST00000574755 PROB1E7EW31 1015 aa11.86□□□□□ -0.51
VPS33B-208ENST00000574755 ST8SIA3O43173 380 aa11.86□□□□□ -0.51
VPS33B-208ENST00000574755 PSPNO60542 156 aa11.86□□□□□ -0.51
VPS33B-208ENST00000574755 CDS2O95674 445 aa11.86□□□□□ -0.51
VPS33B-208ENST00000574755 RPL7L1Q6DKI1 246 aaKnown RBP11.86□□□□□ -0.51
VPS33B-208ENST00000574755 EIF4E3Q8N5X7 224 aaKnown RBP11.86□□□□□ -0.51
VPS33B-208ENST00000574755 UBALD1Q8TB05 177 aa11.86□□□□□ -0.51
VPS33B-208ENST00000574755 RNF141Q8WVD5 230 aa11.86□□□□□ -0.51
VPS33B-208ENST00000574755 MUCL1Q96DR8 90 aa11.86□□□□□ -0.51
VPS33B-208ENST00000574755 SLX1AQ9BQ83 275 aa11.86□□□□□ -0.51
VPS33B-208ENST00000574755 SFXN3Q9BWM7 321 aa11.86□□□□□ -0.51
VPS33B-208ENST00000574755 COL25A1Q9BXS0 654 aaPredicted RBP11.86□□□□□ -0.51
VPS33B-208ENST00000574755 TAF9BQ9HBM6 251 aa11.86□□□□□ -0.51
VPS33B-208ENST00000574755 DUSP13Q9UII6 198 aa11.86□□□□□ -0.51
VPS33B-208ENST00000574755 RP1L1Q8IWN7 2480 aaPredicted RBP11.86□□□□□ -0.51
VPS33B-208ENST00000574755 NKX2-6A6NCS4 301 aa11.85□□□□□ -0.51
VPS33B-208ENST00000574755 KRBOX1C9JBD0 128 aa11.85□□□□□ -0.51
VPS33B-208ENST00000574755 NPIPB11E5RHQ5 1161 aa11.85□□□□□ -0.51
VPS33B-208ENST00000574755 PGLYRP1O75594 196 aaPredicted RBP11.85□□□□□ -0.51
VPS33B-208ENST00000574755 CRYZL1O95825 349 aa11.85□□□□□ -0.51
VPS33B-208ENST00000574755 TMEM33P57088 247 aa11.85□□□□□ -0.51
VPS33B-208ENST00000574755 EIF5AP63241 154 aaKnown RBP11.85□□□□□ -0.51
VPS33B-208ENST00000574755 SELENOHQ8IZQ5 122 aaKnown RBP11.85□□□□□ -0.51
VPS33B-208ENST00000574755 OR10V1Q8NGI7 309 aa11.85□□□□□ -0.51
VPS33B-208ENST00000574755 DNTTIP1Q9H147 329 aa11.85□□□□□ -0.51
VPS33B-208ENST00000574755 TLNRD1Q9H1K6 362 aa11.85□□□□□ -0.51
VPS33B-208ENST00000574755 NARFLQ9H6Q4 476 aa11.85□□□□□ -0.51
VPS33B-208ENST00000574755 MBNL3Q9NUK0 354 aaKnown RBP11.85□□□□□ -0.51
VPS33B-208ENST00000574755 FBXL17Q9UF56 701 aa11.85□□□□□ -0.51
VPS33B-208ENST00000574755 TP53TG5Q9Y2B4 290 aa11.85□□□□□ -0.51
VPS33B-208ENST00000574755 BSNQ9UPA5 3926 aa11.85□□□□□ -0.51
VPS33B-208ENST00000574755 APC2O95996 2303 aa11.85□□□□□ -0.51
VPS33B-208ENST00000574755 H0Y980 276 aa11.85□□□□□ -0.51
VPS33B-208ENST00000574755 CRYAAP02489 173 aa11.85□□□□□ -0.51
VPS33B-208ENST00000574755 UCP1P25874 307 aa11.85□□□□□ -0.51
VPS33B-208ENST00000574755 ACP7Q6ZNF0 438 aa11.85□□□□□ -0.51
VPS33B-208ENST00000574755 OR2Z1Q8NG97 314 aa11.85□□□□□ -0.51
VPS33B-208ENST00000574755 OR4D5Q8NGN0 318 aa11.85□□□□□ -0.51
VPS33B-208ENST00000574755 LILRB1Q8NHL6 650 aaPredicted RBP11.85□□□□□ -0.51
VPS33B-208ENST00000574755 SMIM3Q9BZL3 60 aa11.85□□□□□ -0.51
VPS33B-208ENST00000574755 ASF1BQ9NVP2 202 aa11.85□□□□□ -0.51
VPS33B-208ENST00000574755 WIPI2Q9Y4P8 454 aa11.85□□□□□ -0.51
VPS33B-208ENST00000574755 RBM7Q9Y580 266 aaKnown RBP11.85□□□□□ -0.51
VPS33B-208ENST00000574755 KIAA2026Q5HYC2 2103 aa11.85□□□□□ -0.51
VPS33B-208ENST00000574755 ACACAQ13085 2346 aa11.84□□□□□ -0.51
VPS33B-208ENST00000574755 SCO1O75880 301 aa11.84□□□□□ -0.51
VPS33B-208ENST00000574755 BMP5P22003 454 aa11.84□□□□□ -0.51
VPS33B-208ENST00000574755 F2RP25116 425 aa11.84□□□□□ -0.51
VPS33B-208ENST00000574755 BOLLQ8N9W6 283 aaKnown RBP11.84□□□□□ -0.51
VPS33B-208ENST00000574755 OR51H1Q8NH63 302 aa11.84□□□□□ -0.51
VPS33B-208ENST00000574755 SPIN2AQ99865 258 aa11.84□□□□□ -0.51
VPS33B-208ENST00000574755 SPIN2BQ9BPZ2 258 aa11.84□□□□□ -0.51
VPS33B-208ENST00000574755 SCNM1Q9BWG6 230 aa11.84□□□□□ -0.51
VPS33B-208ENST00000574755 POMT1Q9Y6A1 747 aa11.84□□□□□ -0.51
VPS33B-208ENST00000574755 MAP1BP46821 2468 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms