RNA–Protein interactions for RNA: ENST00000574294.5

TVP23B-207, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 1,049 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-207ENST00000574294 VCX3BQ9H321 246 aa13.22□□□□□ -0.29
TVP23B-207ENST00000574294 PSG11Q9UQ72 335 aa13.22□□□□□ -0.29
TVP23B-207ENST00000574294 PNMA8CA0A1B0GUJ8 204 aa13.21□□□□□ -0.29
TVP23B-207ENST00000574294 WIPF1O43516 503 aa13.21□□□□□ -0.29
TVP23B-207ENST00000574294 MAS1P04201 325 aa13.21□□□□□ -0.29
TVP23B-207ENST00000574294 BLCAPP62952 87 aa13.21□□□□□ -0.29
TVP23B-207ENST00000574294 SPHARQ15513 63 aa13.21□□□□□ -0.29
TVP23B-207ENST00000574294 AWAT2Q6E213 333 aa13.21□□□□□ -0.29
TVP23B-207ENST00000574294 TRAT1Q6PIZ9 186 aa13.21□□□□□ -0.29
TVP23B-207ENST00000574294 NDUFA11Q86Y39 141 aa13.21□□□□□ -0.29
TVP23B-207ENST00000574294 OR10X1Q8NGY0 326 aa13.21□□□□□ -0.29
TVP23B-207ENST00000574294 FAM110DQ8TAY7 271 aaPredicted RBP13.21□□□□□ -0.29
TVP23B-207ENST00000574294 PHYHIPQ92561 330 aa13.21□□□□□ -0.29
TVP23B-207ENST00000574294 MUL1Q969V5 352 aa13.21□□□□□ -0.29
TVP23B-207ENST00000574294 SLC25A33Q9BSK2 321 aa13.21□□□□□ -0.29
TVP23B-207ENST00000574294 RCC2Q9P258 522 aaKnown RBP13.21□□□□□ -0.29
TVP23B-207ENST00000574294 TPRKBQ9Y3C4 175 aa13.21□□□□□ -0.29
TVP23B-207ENST00000574294 A0A1W2PPK0 400 aa13.2□□□□□ -0.3
TVP23B-207ENST00000574294 PTGES3LE9PB15 166 aa13.2□□□□□ -0.3
TVP23B-207ENST00000574294 OPN1MWP04001 364 aa13.2□□□□□ -0.3
TVP23B-207ENST00000574294 UBBP0CG47 229 aa13.2□□□□□ -0.3
TVP23B-207ENST00000574294 OPN1MW2P0DN77 364 aa13.2□□□□□ -0.3
TVP23B-207ENST00000574294 OPN1MW3P0DN78 364 aa13.2□□□□□ -0.3
TVP23B-207ENST00000574294 JUNBP17275 347 aaPredicted RBP13.2□□□□□ -0.3
TVP23B-207ENST00000574294 SSTR5P35346 364 aa13.2□□□□□ -0.3
TVP23B-207ENST00000574294 HABP2Q14520 560 aaPredicted RBP13.2□□□□□ -0.3
TVP23B-207ENST00000574294 ZNF497Q6ZNH5 498 aa13.2□□□□□ -0.3
TVP23B-207ENST00000574294 RFESDQ8TAC1 157 aa13.2□□□□□ -0.3
TVP23B-207ENST00000574294 WIPF2Q8TF74 440 aaPredicted RBP13.2□□□□□ -0.3
TVP23B-207ENST00000574294 OCSTAMPQ9BR26 566 aa13.2□□□□□ -0.3
TVP23B-207ENST00000574294 CST11Q9H112 138 aa13.2□□□□□ -0.3
TVP23B-207ENST00000574294 MAGEA13PA6NCF6 341 aa13.19□□□□□ -0.3
TVP23B-207ENST00000574294 FAM90A9PA6NNJ1 464 aa13.19□□□□□ -0.3
TVP23B-207ENST00000574294 ANKRD65E5RJM6 399 aa13.19□□□□□ -0.3
TVP23B-207ENST00000574294 H0YHG0 523 aa13.19□□□□□ -0.3
TVP23B-207ENST00000574294 AIPO00170 330 aa13.19□□□□□ -0.3
TVP23B-207ENST00000574294 SPINT2O43291 252 aa13.19□□□□□ -0.3
TVP23B-207ENST00000574294 MT-ND4P03905 459 aa13.19□□□□□ -0.3
TVP23B-207ENST00000574294 FUT3P21217 361 aa13.19□□□□□ -0.3
TVP23B-207ENST00000574294 IL3RAP26951 378 aa13.19□□□□□ -0.3
TVP23B-207ENST00000574294 RANBP1P43487 201 aa13.19□□□□□ -0.3
TVP23B-207ENST00000574294 ACSM3Q53FZ2 586 aa13.19□□□□□ -0.3
TVP23B-207ENST00000574294 C6orf183Q5T699 404 aa13.19□□□□□ -0.3
TVP23B-207ENST00000574294 GLT8D1Q68CQ7 371 aa13.19□□□□□ -0.3
TVP23B-207ENST00000574294 UNQ9370/PRO34162Q6UXP9 181 aa13.19□□□□□ -0.3
TVP23B-207ENST00000574294 ZNF554Q86TJ5 538 aa13.19□□□□□ -0.3
TVP23B-207ENST00000574294 LYPD6Q86Y78 171 aa13.19□□□□□ -0.3
TVP23B-207ENST00000574294 LINC00311Q8N616 119 aa13.19□□□□□ -0.3
TVP23B-207ENST00000574294 C11orf44Q8N8P7 122 aa13.19□□□□□ -0.3
TVP23B-207ENST00000574294 OR4F17Q8NGA8 305 aa13.19□□□□□ -0.3
TVP23B-207ENST00000574294 ARL11Q969Q4 196 aa13.19□□□□□ -0.3
TVP23B-207ENST00000574294 OR4F4Q96R69 305 aa13.19□□□□□ -0.3
TVP23B-207ENST00000574294 A0A1W2PP11 408 aa13.18□□□□□ -0.3
TVP23B-207ENST00000574294 PIN1P1O15428 100 aa13.18□□□□□ -0.3
TVP23B-207ENST00000574294 CRTAPO75718 401 aaPredicted RBP13.18□□□□□ -0.3
TVP23B-207ENST00000574294 GAPDHP04406 335 aaKnown RBP13.18□□□□□ -0.3
TVP23B-207ENST00000574294 LPLP06858 475 aa13.18□□□□□ -0.3
TVP23B-207ENST00000574294 MGMTP16455 207 aa13.18□□□□□ -0.3
TVP23B-207ENST00000574294 GABPB1Q06547 395 aaPredicted RBP13.18□□□□□ -0.3
TVP23B-207ENST00000574294 PDLIM3Q53GG5 364 aaPredicted RBP13.18□□□□□ -0.3
TVP23B-207ENST00000574294 STEAP3Q658P3 488 aa13.18□□□□□ -0.3
TVP23B-207ENST00000574294 RAB12Q6IQ22 244 aa13.18□□□□□ -0.3
TVP23B-207ENST00000574294 GAPTQ8N292 157 aa13.18□□□□□ -0.3
TVP23B-207ENST00000574294 SELENOIQ9C0D9 397 aa13.18□□□□□ -0.3
TVP23B-207ENST00000574294 ETAA1Q9NY74 926 aa13.18□□□□□ -0.3
TVP23B-207ENST00000574294 NKX1-2Q9UD57 310 aaPredicted RBP13.18□□□□□ -0.3
TVP23B-207ENST00000574294 TRAPPC2LQ9UL33 140 aa13.18□□□□□ -0.3
TVP23B-207ENST00000574294 MOB4Q9Y3A3 225 aa13.18□□□□□ -0.3
TVP23B-207ENST00000574294 PEX16Q9Y5Y5 336 aa13.18□□□□□ -0.3
TVP23B-207ENST00000574294 C15orf65H3BRN8 121 aa13.17□□□□□ -0.3
TVP23B-207ENST00000574294 CCRL2O00421 344 aa13.17□□□□□ -0.3
TVP23B-207ENST00000574294 SDCBPO00560 298 aaPredicted RBP13.17□□□□□ -0.3
TVP23B-207ENST00000574294 SC5DO75845 299 aa13.17□□□□□ -0.3
TVP23B-207ENST00000574294 MYF6P23409 242 aa13.17□□□□□ -0.3
TVP23B-207ENST00000574294 CD24P25063 80 aa13.17□□□□□ -0.3
TVP23B-207ENST00000574294 PSMA1P25786 263 aaKnown RBP13.17□□□□□ -0.3
TVP23B-207ENST00000574294 HSPA13P48723 471 aa13.17□□□□□ -0.3
TVP23B-207ENST00000574294 SLC35A2P78381 396 aa13.17□□□□□ -0.3
TVP23B-207ENST00000574294 ZNF816Q0VGE8 651 aaPredicted RBP13.17□□□□□ -0.3
TVP23B-207ENST00000574294 TRAM1Q15629 374 aa13.17□□□□□ -0.3
TVP23B-207ENST00000574294 LTC4SQ16873 150 aa13.17□□□□□ -0.3
TVP23B-207ENST00000574294 ABCA11PQ4W5N1 156 aa13.17□□□□□ -0.3
TVP23B-207ENST00000574294 CENPVQ7Z7K6 275 aaPredicted RBP13.17□□□□□ -0.3
TVP23B-207ENST00000574294 OR5AU1Q8NGC0 362 aa13.17□□□□□ -0.3
TVP23B-207ENST00000574294 Q96M66 194 aa13.17□□□□□ -0.3
TVP23B-207ENST00000574294 ANKRD60Q9BZ19 345 aa13.17□□□□□ -0.3
TVP23B-207ENST00000574294 GFOD1Q9NXC2 390 aa13.17□□□□□ -0.3
TVP23B-207ENST00000574294 ZNF581Q9P0T4 197 aa13.17□□□□□ -0.3
TVP23B-207ENST00000574294 LSM2Q9Y333 95 aaKnown RBP13.17□□□□□ -0.3
TVP23B-207ENST00000574294 PLXNB1O43157 2135 aa13.16□□□□□ -0.3
TVP23B-207ENST00000574294 A0A1W2PPI3 338 aa13.16□□□□□ -0.3
TVP23B-207ENST00000574294 FGF16O43320 207 aa13.16□□□□□ -0.3
TVP23B-207ENST00000574294 TXNL1O43396 289 aa13.16□□□□□ -0.3
TVP23B-207ENST00000574294 KCNAB3O43448 404 aa13.16□□□□□ -0.3
TVP23B-207ENST00000574294 CD28P10747 220 aa13.16□□□□□ -0.3
TVP23B-207ENST00000574294 GNG10P50151 68 aa13.16□□□□□ -0.3
TVP23B-207ENST00000574294 AQP4P55087 323 aa13.16□□□□□ -0.3
TVP23B-207ENST00000574294 MED22Q15528 200 aa13.16□□□□□ -0.3
TVP23B-207ENST00000574294 SYT6Q5T7P8 510 aaPredicted RBP13.16□□□□□ -0.3
TVP23B-207ENST00000574294 Q6ZS46 218 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms