RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 DIABLOQ9NR28 239 aa12.87□□□□□ -0.35
CCNE1-204ENST00000574121 SIRT7Q9NRC8 400 aa12.87□□□□□ -0.35
CCNE1-204ENST00000574121 CALYQ9NYX4 217 aa12.87□□□□□ -0.35
CCNE1-204ENST00000574121 MGAT4AQ9UM21 535 aa12.87□□□□□ -0.35
CCNE1-204ENST00000574121 KCNK7Q9Y2U2 307 aa12.87□□□□□ -0.35
CCNE1-204ENST00000574121 SESN1Q9Y6P5 492 aa12.87□□□□□ -0.35
CCNE1-204ENST00000574121 SONP18583 2426 aaKnown RBP12.87□□□□□ -0.35
CCNE1-204ENST00000574121 IGHV1-69DA0A0B4J2H0 117 aa12.86□□□□□ -0.35
CCNE1-204ENST00000574121 MEX3AA1L020 520 aaKnown RBP12.86□□□□□ -0.35
CCNE1-204ENST00000574121 NPIPB11E5RHQ5 1161 aa12.86□□□□□ -0.35
CCNE1-204ENST00000574121 IGHV1-69P01742 117 aa12.86□□□□□ -0.35
CCNE1-204ENST00000574121 GSTP1P09211 210 aaKnown RBP12.86□□□□□ -0.35
CCNE1-204ENST00000574121 HOXB4P17483 251 aaPredicted RBP12.86□□□□□ -0.35
CCNE1-204ENST00000574121 UBE2E1P51965 193 aa12.86□□□□□ -0.35
CCNE1-204ENST00000574121 MRPS15P82914 257 aaKnown RBP12.86□□□□□ -0.35
CCNE1-204ENST00000574121 C17orf58Q2M2W7 97 aa12.86□□□□□ -0.35
CCNE1-204ENST00000574121 C9orf139Q6ZV77 190 aa12.86□□□□□ -0.35
CCNE1-204ENST00000574121 OR13D1Q8NGV5 346 aa12.86□□□□□ -0.35
CCNE1-204ENST00000574121 MRPL30Q8TCC3 161 aaKnown RBP12.86□□□□□ -0.35
CCNE1-204ENST00000574121 MRGPRDQ8TDS7 321 aa12.86□□□□□ -0.35
CCNE1-204ENST00000574121 LHX4Q969G2 390 aa12.86□□□□□ -0.35
CCNE1-204ENST00000574121 S100A16Q96FQ6 103 aaKnown RBP12.86□□□□□ -0.35
CCNE1-204ENST00000574121 CMSS1Q9BQ75 279 aaKnown RBP12.86□□□□□ -0.35
CCNE1-204ENST00000574121 AK3Q9UIJ7 227 aa12.86□□□□□ -0.35
CCNE1-204ENST00000574121 FN1P02751 2386 aaKnown RBP12.86□□□□□ -0.35
CCNE1-204ENST00000574121 RNASEK-C17orf49H0YIS7 233 aa12.85□□□□□ -0.35
CCNE1-204ENST00000574121 SPINT2O43291 252 aa12.85□□□□□ -0.35
CCNE1-204ENST00000574121 APOA1P02647 267 aa12.85□□□□□ -0.35
CCNE1-204ENST00000574121 CD3GP09693 182 aa12.85□□□□□ -0.35
CCNE1-204ENST00000574121 IGHV4-38-2P0DP08 117 aa12.85□□□□□ -0.35
CCNE1-204ENST00000574121 GNB3P16520 340 aa12.85□□□□□ -0.35
CCNE1-204ENST00000574121 EPHA1P21709 976 aa12.85□□□□□ -0.35
CCNE1-204ENST00000574121 CDK2P24941 298 aa12.85□□□□□ -0.35
CCNE1-204ENST00000574121 FPR2P25090 351 aa12.85□□□□□ -0.35
CCNE1-204ENST00000574121 PITPNAQ00169 270 aa12.85□□□□□ -0.35
CCNE1-204ENST00000574121 ZNF880Q6PDB4 577 aa12.85□□□□□ -0.35
CCNE1-204ENST00000574121 OR4K15Q8NH41 348 aa12.85□□□□□ -0.35
CCNE1-204ENST00000574121 KCNIP1Q9NZI2 227 aa12.85□□□□□ -0.35
CCNE1-204ENST00000574121 COMMD3Q9UBI1 195 aa12.85□□□□□ -0.35
CCNE1-204ENST00000574121 DSCAML1Q8TD84 2053 aa12.84□□□□□ -0.35
CCNE1-204ENST00000574121 NAV3Q8IVL0 2385 aa12.84□□□□□ -0.35
CCNE1-204ENST00000574121 A0A087X0M5 115 aa12.84□□□□□ -0.35
CCNE1-204ENST00000574121 A0A1B0GX30 115 aa12.84□□□□□ -0.35
CCNE1-204ENST00000574121 C15orf65H3BRN8 121 aa12.84□□□□□ -0.35
CCNE1-204ENST00000574121 CD34P28906 385 aa12.84□□□□□ -0.35
CCNE1-204ENST00000574121 SSTR5P35346 364 aa12.84□□□□□ -0.35
CCNE1-204ENST00000574121 PNLIPRP3Q17RR3 467 aa12.84□□□□□ -0.35
CCNE1-204ENST00000574121 CDNFQ49AH0 187 aa12.84□□□□□ -0.35
CCNE1-204ENST00000574121 MIDNQ504T8 468 aa12.84□□□□□ -0.35
CCNE1-204ENST00000574121 ZNF782Q6ZMW2 699 aaPredicted RBP12.84□□□□□ -0.35
CCNE1-204ENST00000574121 RTN4RL2Q86UN3 420 aa12.84□□□□□ -0.35
CCNE1-204ENST00000574121 OR11H6Q8NGC7 330 aa12.84□□□□□ -0.35
CCNE1-204ENST00000574121 OR52M1Q8NGK5 317 aa12.84□□□□□ -0.35
CCNE1-204ENST00000574121 CCDC107Q8WV48 283 aa12.84□□□□□ -0.35
CCNE1-204ENST00000574121 ARL11Q969Q4 196 aa12.84□□□□□ -0.35
CCNE1-204ENST00000574121 DGCR14Q96DF8 476 aaKnown RBP12.84□□□□□ -0.35
CCNE1-204ENST00000574121 KIRREL1Q96J84 757 aa12.84□□□□□ -0.35
CCNE1-204ENST00000574121 MS4A7Q9GZW8 240 aaPredicted RBP12.84□□□□□ -0.35
CCNE1-204ENST00000574121 TMEM133Q9H2Q1 129 aa12.84□□□□□ -0.35
CCNE1-204ENST00000574121 CHMP1AQ9HD42 196 aaPredicted RBP12.84□□□□□ -0.35
CCNE1-204ENST00000574121 IDI2-AS1Q9NZ38 188 aa12.84□□□□□ -0.35
CCNE1-204ENST00000574121 NSD1Q96L73 2696 aaPredicted RBP12.84□□□□□ -0.35
CCNE1-204ENST00000574121 A0A075B6Q4 140 aa12.83□□□□□ -0.36
CCNE1-204ENST00000574121 C12orf77C9JDV5 145 aa12.83□□□□□ -0.36
CCNE1-204ENST00000574121 F2RL2O00254 374 aa12.83□□□□□ -0.36
CCNE1-204ENST00000574121 XRCC3O43542 346 aa12.83□□□□□ -0.36
CCNE1-204ENST00000574121 RCC1P18754 421 aaPredicted RBP12.83□□□□□ -0.36
CCNE1-204ENST00000574121 SRSF7Q16629 238 aaKnown RBP eCLIP12.83□□□□□ -0.36
CCNE1-204ENST00000574121 TUSC1Q2TAM9 212 aa12.83□□□□□ -0.36
CCNE1-204ENST00000574121 ZNF260Q3ZCT1 412 aa12.83□□□□□ -0.36
CCNE1-204ENST00000574121 PRAMEF5Q5TYX0 476 aa12.83□□□□□ -0.36
CCNE1-204ENST00000574121 HACD4Q5VWC8 232 aa12.83□□□□□ -0.36
CCNE1-204ENST00000574121 OLFML2AQ68BL7 652 aa12.83□□□□□ -0.36
CCNE1-204ENST00000574121 HCP5Q6MZN7 132 aa12.83□□□□□ -0.36
CCNE1-204ENST00000574121 ZMAT3Q9HA38 289 aaKnown RBP12.83□□□□□ -0.36
CCNE1-204ENST00000574121 TAF9BQ9HBM6 251 aa12.83□□□□□ -0.36
CCNE1-204ENST00000574121 TEP1Q99973 2627 aaKnown RBP12.83□□□□□ -0.36
CCNE1-204ENST00000574121 TRAV18A0A075B6X5 111 aa12.82□□□□□ -0.36
CCNE1-204ENST00000574121 IGHV2-26A0A0B4J1V2 119 aa12.82□□□□□ -0.36
CCNE1-204ENST00000574121 TRAV39A0A0B4J263 110 aa12.82□□□□□ -0.36
CCNE1-204ENST00000574121 NPFFO15130 113 aa12.82□□□□□ -0.36
CCNE1-204ENST00000574121 MMP23AO75900 390 aa12.82□□□□□ -0.36
CCNE1-204ENST00000574121 HBZP02008 142 aa12.82□□□□□ -0.36
CCNE1-204ENST00000574121 MELTFP08582 738 aa12.82□□□□□ -0.36
CCNE1-204ENST00000574121 OMGP23515 440 aa12.82□□□□□ -0.36
CCNE1-204ENST00000574121 DTYMKP23919 212 aa12.82□□□□□ -0.36
CCNE1-204ENST00000574121 KLRD1Q13241 179 aa12.82□□□□□ -0.36
CCNE1-204ENST00000574121 ARFRP1Q13795 201 aa12.82□□□□□ -0.36
CCNE1-204ENST00000574121 HMGN3Q15651 99 aa12.82□□□□□ -0.36
CCNE1-204ENST00000574121 Q3ZCU0 254 aa12.82□□□□□ -0.36
CCNE1-204ENST00000574121 ZNF626Q68DY1 528 aa12.82□□□□□ -0.36
CCNE1-204ENST00000574121 RFESDQ8TAC1 157 aa12.82□□□□□ -0.36
CCNE1-204ENST00000574121 CYYR1Q96J86 154 aa12.82□□□□□ -0.36
CCNE1-204ENST00000574121 HDHD3Q9BSH5 251 aaPredicted RBP12.82□□□□□ -0.36
CCNE1-204ENST00000574121 CLEC7AQ9BXN2 247 aa12.82□□□□□ -0.36
CCNE1-204ENST00000574121 SLIRPQ9GZT3 109 aaKnown RBP12.82□□□□□ -0.36
CCNE1-204ENST00000574121 Q9N2K0 584 aa12.82□□□□□ -0.36
CCNE1-204ENST00000574121 ZNF69Q9UC07 566 aa12.82□□□□□ -0.36
CCNE1-204ENST00000574121 IGHV3OR16-10A0A075B7F0 116 aa12.81□□□□□ -0.36
CCNE1-204ENST00000574121 DPPA5A6NC42 116 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms