RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 FGF8P55075 233 aaPredicted RBP13.27□□□□□ -0.29
SMG6-207ENST00000570756 BSXQ3C1V8 233 aa13.27□□□□□ -0.29
SMG6-207ENST00000570756 ZNF818PQ6ZRF7 136 aa13.27□□□□□ -0.29
SMG6-207ENST00000570756 SHISA6Q6ZSJ9 500 aa13.27□□□□□ -0.29
SMG6-207ENST00000570756 GAPTQ8N292 157 aa13.27□□□□□ -0.29
SMG6-207ENST00000570756 NAT6Q93015 286 aa13.27□□□□□ -0.29
SMG6-207ENST00000570756 NABP1Q96AH0 204 aa13.27□□□□□ -0.29
SMG6-207ENST00000570756 RSG1Q9BU20 258 aa13.27□□□□□ -0.29
SMG6-207ENST00000570756 RTTNQ86VV8 2226 aa13.26□□□□□ -0.29
SMG6-207ENST00000570756 PCDH15Q96QU1 1955 aa13.26□□□□□ -0.29
SMG6-207ENST00000570756 IGKV1-12A0A0C4DH73 117 aa13.26□□□□□ -0.29
SMG6-207ENST00000570756 NRASP01111 189 aa13.26□□□□□ -0.29
SMG6-207ENST00000570756 HRASP01112 189 aa13.26□□□□□ -0.29
SMG6-207ENST00000570756 IGKV1D-12P01611 117 aa13.26□□□□□ -0.29
SMG6-207ENST00000570756 FGF5P12034 268 aa13.26□□□□□ -0.29
SMG6-207ENST00000570756 MDH2P40926 338 aaKnown RBP13.26□□□□□ -0.29
SMG6-207ENST00000570756 RBM11P57052 281 aaKnown RBP13.26□□□□□ -0.29
SMG6-207ENST00000570756 ERVS71-1P61550 626 aa13.26□□□□□ -0.29
SMG6-207ENST00000570756 Q6ZS49 121 aa13.26□□□□□ -0.29
SMG6-207ENST00000570756 NECAP1Q8NC96 275 aa13.26□□□□□ -0.29
SMG6-207ENST00000570756 OR2AE1Q8NHA4 323 aa13.26□□□□□ -0.29
SMG6-207ENST00000570756 LMX1AQ8TE12 382 aa13.26□□□□□ -0.29
SMG6-207ENST00000570756 PINX1Q96BK5 328 aaKnown RBP13.26□□□□□ -0.29
SMG6-207ENST00000570756 NCOR1O75376 2440 aa13.26□□□□□ -0.29
SMG6-207ENST00000570756 H0Y980 276 aa13.25□□□□□ -0.29
SMG6-207ENST00000570756 M0QZK8 103 aa13.25□□□□□ -0.29
SMG6-207ENST00000570756 GGCTO75223 188 aaKnown RBP13.25□□□□□ -0.29
SMG6-207ENST00000570756 KBTBD11O94819 623 aa13.25□□□□□ -0.29
SMG6-207ENST00000570756 MBP02144 154 aa13.25□□□□□ -0.29
SMG6-207ENST00000570756 ZNF726P1Q15940 193 aa13.25□□□□□ -0.29
SMG6-207ENST00000570756 Q6ZPA2 131 aa13.25□□□□□ -0.29
SMG6-207ENST00000570756 CENPVQ7Z7K6 275 aaPredicted RBP13.25□□□□□ -0.29
SMG6-207ENST00000570756 TMEM54Q969K7 222 aa13.25□□□□□ -0.29
SMG6-207ENST00000570756 RBM24Q9BX46 236 aaKnown RBP13.25□□□□□ -0.29
SMG6-207ENST00000570756 RBKSQ9H477 322 aa13.25□□□□□ -0.29
SMG6-207ENST00000570756 TAAR3PQ9P1P4 343 aa13.25□□□□□ -0.29
SMG6-207ENST00000570756 MYOTQ9UBF9 498 aa13.25□□□□□ -0.29
SMG6-207ENST00000570756 CBY1Q9Y3M2 126 aa13.25□□□□□ -0.29
SMG6-207ENST00000570756 MAP1LC3B2A6NCE7 125 aa13.25□□□□□ -0.29
SMG6-207ENST00000570756 DHHO43323 396 aa13.25□□□□□ -0.29
SMG6-207ENST00000570756 ZNF737O75373 536 aa13.25□□□□□ -0.29
SMG6-207ENST00000570756 PIAS2O75928 621 aa13.25□□□□□ -0.29
SMG6-207ENST00000570756 OR7C1O76099 320 aaPredicted RBP13.25□□□□□ -0.29
SMG6-207ENST00000570756 CNOT4O95628 575 aaKnown RBP13.25□□□□□ -0.29
SMG6-207ENST00000570756 OR4A8P0C604 315 aa13.25□□□□□ -0.29
SMG6-207ENST00000570756 ZNF25P17030 456 aaPredicted RBP13.25□□□□□ -0.29
SMG6-207ENST00000570756 S100GP29377 79 aa13.25□□□□□ -0.29
SMG6-207ENST00000570756 TDGF1P3P51864 188 aa13.25□□□□□ -0.29
SMG6-207ENST00000570756 RPS18P62269 152 aaKnown RBP13.25□□□□□ -0.29
SMG6-207ENST00000570756 TMEM267Q0VDI3 215 aaPredicted RBP13.25□□□□□ -0.29
SMG6-207ENST00000570756 TMEM41BQ5BJD5 291 aa13.25□□□□□ -0.29
SMG6-207ENST00000570756 ACTL10Q5JWF8 245 aa13.25□□□□□ -0.29
SMG6-207ENST00000570756 C1orf194Q5T5A4 169 aa13.25□□□□□ -0.29
SMG6-207ENST00000570756 ZNF845Q96IR2 970 aaPredicted RBP13.25□□□□□ -0.29
SMG6-207ENST00000570756 MAP1LC3BQ9GZQ8 125 aa13.25□□□□□ -0.29
SMG6-207ENST00000570756 SPAG17Q6Q759 2223 aa13.24□□□□□ -0.29
SMG6-207ENST00000570756 B4E171 279 aa13.24□□□□□ -0.29
SMG6-207ENST00000570756 H3BP45 60 aa13.24□□□□□ -0.29
SMG6-207ENST00000570756 SLC25A6P12236 298 aa13.24□□□□□ -0.29
SMG6-207ENST00000570756 TSPAN7P41732 249 aa13.24□□□□□ -0.29
SMG6-207ENST00000570756 FUT6P51993 359 aa13.24□□□□□ -0.29
SMG6-207ENST00000570756 MEF2BQ02080 365 aaPredicted RBP13.24□□□□□ -0.29
SMG6-207ENST00000570756 SRSF7Q16629 238 aaKnown RBP eCLIP13.24□□□□□ -0.29
SMG6-207ENST00000570756 MRPL52Q86TS9 123 aaKnown RBP13.24□□□□□ -0.29
SMG6-207ENST00000570756 ANAPC16Q96DE5 110 aa13.24□□□□□ -0.29
SMG6-207ENST00000570756 OR51I2Q9H344 312 aa13.24□□□□□ -0.29
SMG6-207ENST00000570756 VSIRQ9H7M9 311 aa13.24□□□□□ -0.29
SMG6-207ENST00000570756 CBLN4Q9NTU7 201 aa13.24□□□□□ -0.29
SMG6-207ENST00000570756 TTC28Q96AY4 2481 aa13.24□□□□□ -0.29
SMG6-207ENST00000570756 TRBV11-1A0A0K0K1C0 115 aa13.24□□□□□ -0.29
SMG6-207ENST00000570756 CST2P09228 141 aa13.24□□□□□ -0.29
SMG6-207ENST00000570756 GZMHP20718 246 aa13.24□□□□□ -0.29
SMG6-207ENST00000570756 HBG1P69891 147 aa13.24□□□□□ -0.29
SMG6-207ENST00000570756 HBG2P69892 147 aa13.24□□□□□ -0.29
SMG6-207ENST00000570756 RNPS1Q15287 305 aaKnown RBP13.24□□□□□ -0.29
SMG6-207ENST00000570756 RSPO4Q2I0M5 234 aaPredicted RBP13.24□□□□□ -0.29
SMG6-207ENST00000570756 PHYHD1Q5SRE7 291 aa13.24□□□□□ -0.29
SMG6-207ENST00000570756 CARFQ8N187 725 aa13.24□□□□□ -0.29
SMG6-207ENST00000570756 CISD2Q8N5K1 135 aaKnown RBP13.24□□□□□ -0.29
SMG6-207ENST00000570756 OR2M3Q8NG83 312 aa13.24□□□□□ -0.29
SMG6-207ENST00000570756 HLA-CQ95604 372 aa13.24□□□□□ -0.29
SMG6-207ENST00000570756 PCGF1Q9BSM1 259 aa13.24□□□□□ -0.29
SMG6-207ENST00000570756 FKBP11Q9NYL4 201 aa13.24□□□□□ -0.29
SMG6-207ENST00000570756 FUT9Q9Y231 359 aa13.24□□□□□ -0.29
SMG6-207ENST00000570756 A0A1W2PPC4 97 aa13.23□□□□□ -0.29
SMG6-207ENST00000570756 A0A1W2PPQ1 181 aa13.23□□□□□ -0.29
SMG6-207ENST00000570756 TMEM210A6NLX4 147 aa13.23□□□□□ -0.29
SMG6-207ENST00000570756 MARCH11A6NNE9 402 aa13.23□□□□□ -0.29
SMG6-207ENST00000570756 C2CD4DB7Z1M9 353 aa13.23□□□□□ -0.29
SMG6-207ENST00000570756 TMEM250H0YL14 139 aa13.23□□□□□ -0.29
SMG6-207ENST00000570756 SCGB1D1O95968 90 aa13.23□□□□□ -0.29
SMG6-207ENST00000570756 CRYABP02511 175 aaKnown RBP13.23□□□□□ -0.29
SMG6-207ENST00000570756 PTGDSP41222 190 aa13.23□□□□□ -0.29
SMG6-207ENST00000570756 RPL23P62829 140 aaKnown RBP13.23□□□□□ -0.29
SMG6-207ENST00000570756 DCAF10Q5QP82 559 aa13.23□□□□□ -0.29
SMG6-207ENST00000570756 TMEM42Q69YG0 159 aa13.23□□□□□ -0.29
SMG6-207ENST00000570756 TEX38Q6PEX7 206 aa13.23□□□□□ -0.29
SMG6-207ENST00000570756 NFAM1Q8NET5 270 aaPredicted RBP13.23□□□□□ -0.29
SMG6-207ENST00000570756 TMEM37Q8WXS4 190 aa13.23□□□□□ -0.29
SMG6-207ENST00000570756 ZNF391Q9UJN7 358 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms