RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 ZNF565Q8N9K5 539 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 BEST4Q8NFU0 473 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 OR5H2Q8NGV7 314 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 OR52I2Q8NH67 350 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 MRPL30Q8TCC3 161 aaKnown RBP5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 GPX8Q8TED1 209 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 CCDC107Q8WV48 283 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 IL1F10Q8WWZ1 152 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 MAFIPQ8WZ33 124 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 BORCS5Q969J3 196 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 COX4I2Q96KJ9 171 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 ZNF714Q96N38 554 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 ABHD1Q96SE0 405 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 GINS4Q9BRT9 223 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 THAP7Q9BT49 309 aaPredicted RBP5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 DCTN5Q9BTE1 182 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 ST6GALNAC5Q9BVH7 336 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 SHARPINQ9H0F6 387 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 LPAR2Q9HBW0 351 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 ABCB10Q9NRK6 738 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 ONECUT1Q9UBC0 465 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 ITGB1BP2Q9UKP3 347 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 KCNK7Q9Y2U2 307 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 LINC00312Q9Y6C7 94 aa5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 USP9YO00507 2555 aaPredicted RBP5.46□□□□□ -1.54
CTDNEP1-204ENST00000570484 SPTAN1Q13813 2472 aaKnown RBP5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 TRBV6-6A0A0A6YYG2 114 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 PPIAL4CA0A0B4J2A2 164 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 MEX3AA1L020 520 aaKnown RBP5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 MEIOCA2RUB1 952 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 ZNF729A6NN14 1252 aaPredicted RBP5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 CENPXA8MT69 81 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 A8MXK9 166 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 TRDCB7Z8K6 153 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 BET1O15155 118 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 FABP7O15540 132 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 SSX5O60225 188 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 UPK1BO75841 260 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 NAPSAO96009 420 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 MT-ND4P03905 459 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 IFNA6P05013 189 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 LIPFP07098 398 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 WNT2P09544 360 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 PPIAL4GP0DN37 164 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 IL7P13232 177 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 SSTR5P35346 364 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 SEC61A1P61619 476 aaKnown RBP5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 LCN2P80188 198 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 DCTN2Q13561 401 aaKnown RBP5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 MEF2DQ14814 521 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 TMEM30BQ3MIR4 351 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 ZNF554Q86TJ5 538 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 TMEM17Q86X19 198 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 HOGA1Q86XE5 327 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 OR4A4PQ8NGN8 299 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 OR13A1Q8NGR1 328 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 TRIM63Q969Q1 353 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 GALMQ96C23 342 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 REG4Q9BYZ8 158 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 TAF9BQ9HBM6 251 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 Q9N2K0 584 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 C19orf12Q9NSK7 152 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 NECAP2Q9NVZ3 263 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 MCUBQ9NWR8 336 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 CALYQ9NYX4 217 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 EHFQ9NZC4 300 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 GNG12Q9UBI6 72 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 KLK11Q9UBX7 282 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 MTFP1Q9UDX5 166 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 ZNF230Q9UIE0 474 aaPredicted RBP5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 ZNF107Q9UII5 783 aaPredicted RBP5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 ANXA10Q9UJ72 324 aa5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 RPUSD1Q9UJJ7 312 aaKnown RBP5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 ELF5Q9UKW6 265 aaPredicted RBP5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 UBE2J1Q9Y385 318 aaPredicted RBP5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 HELZ2Q9BYK8 2649 aaKnown RBP5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 SPTBN1Q01082 2364 aaKnown RBP5.45□□□□□ -1.54
CTDNEP1-204ENST00000570484 TRAV39A0A0B4J263 110 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 LINC00854A0A1B0GVQ3 168 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 B4DSR2 109 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 DISC1C4P0D8 188 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 C12orf77C9JDV5 145 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 SDCBPO00560 298 aaPredicted RBP5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 TNFRSF13BO14836 293 aaPredicted RBP5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 ORC5O43913 435 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 RGS11O94810 467 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 RAB3DO95716 219 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 IGLV1-40P01703 118 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 MSMBP08118 114 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 CTXN2P0C2S0 81 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 AKAIN1P0CW23 69 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 ZNF728P0DKX0 622 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 RCC1P18754 421 aaPredicted RBP5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 GZMHP20718 246 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 HLA-DMAP28067 261 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 ADMP35318 185 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 HRH1P35367 487 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 GZMKP49863 264 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 HERV-K104P61576 105 aa5.44□□□□□ -1.54
CTDNEP1-204ENST00000570484 LMO4P61968 165 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms