RNA–Protein interactions for RNA: ENST00000569225.5

CHD9-219, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 1,862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-219ENST00000569225 FSHBP01225 129 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 IGHV1-69P01742 117 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 GSTP1P09211 210 aaKnown RBP7.47□□□□□ -1.21
CHD9-219ENST00000569225 FAM157CP0CG43 387 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 IGHV1-8P0DP01 117 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 CDK2P24941 298 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 TALDO1P37837 337 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 TMEM50BP56557 158 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 MOGAT2Q3SYC2 334 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 PLAC9Q5JTB6 97 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 OR4K15Q8NH41 348 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 MRPL30Q8TCC3 161 aaKnown RBP7.47□□□□□ -1.21
CHD9-219ENST00000569225 DYRK2Q92630 601 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 SLC25A38Q96DW6 304 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 CMSS1Q9BQ75 279 aaKnown RBP7.47□□□□□ -1.21
CHD9-219ENST00000569225 LINC00574Q9H8X3 128 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 TRBV6-6A0A0A6YYG2 114 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 CENPVL3A0A0U1RRI6 287 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 MFNGO00587 321 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 NAPSAO96009 420 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 APOA1P02647 267 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 IGHV4-38-2P0DP08 117 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 GNB3P16520 340 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 HOXB4P17483 251 aaPredicted RBP7.47□□□□□ -1.21
CHD9-219ENST00000569225 EPHA1P21709 976 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 MNDAP41218 407 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 UBE2E1P51965 193 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 PITPNAQ00169 270 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 ARFRP1Q13795 201 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 CDNFQ49AH0 187 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 KLF17Q5JT82 389 aaPredicted RBP7.47□□□□□ -1.21
CHD9-219ENST00000569225 PRAMEF5Q5TYX0 476 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 ZNF782Q6ZMW2 699 aaPredicted RBP7.47□□□□□ -1.21
CHD9-219ENST00000569225 C11orf42Q8N5U0 333 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 SETD6Q8TBK2 473 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 DYNC2LI1Q8TCX1 351 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 TNFRSF14Q92956 283 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 ARL11Q969Q4 196 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 MS4A7Q9GZW8 240 aaPredicted RBP7.47□□□□□ -1.21
CHD9-219ENST00000569225 RBM38Q9H0Z9 239 aaKnown RBP7.47□□□□□ -1.21
CHD9-219ENST00000569225 TMEM133Q9H2Q1 129 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.47□□□□□ -1.21
CHD9-219ENST00000569225 ADAM30Q9UKF2 790 aa7.47□□□□□ -1.21
CHD9-219ENST00000569225 TRAV18A0A075B6X5 111 aa7.46□□□□□ -1.22
CHD9-219ENST00000569225 IGHV3OR16-10A0A075B7F0 116 aa7.46□□□□□ -1.22
CHD9-219ENST00000569225 TRAV39A0A0B4J263 110 aa7.46□□□□□ -1.22
CHD9-219ENST00000569225 NPIPB11E5RHQ5 1161 aa7.46□□□□□ -1.22
CHD9-219ENST00000569225 CGB3P0DN86 165 aa7.46□□□□□ -1.22
CHD9-219ENST00000569225 CGB7P0DN87 165 aa7.46□□□□□ -1.22
CHD9-219ENST00000569225 COX7A1P24310 79 aa7.46□□□□□ -1.22
CHD9-219ENST00000569225 SSTR5P35346 364 aa7.46□□□□□ -1.22
CHD9-219ENST00000569225 GNG2P59768 71 aa7.46□□□□□ -1.22
CHD9-219ENST00000569225 PNLIPRP3Q17RR3 467 aa7.46□□□□□ -1.22
CHD9-219ENST00000569225 C17orf58Q2M2W7 97 aa7.46□□□□□ -1.22
CHD9-219ENST00000569225 MIDNQ504T8 468 aa7.46□□□□□ -1.22
CHD9-219ENST00000569225 TMEM69Q5SWH9 247 aa7.46□□□□□ -1.22
CHD9-219ENST00000569225 HACD4Q5VWC8 232 aa7.46□□□□□ -1.22
CHD9-219ENST00000569225 C9orf139Q6ZV77 190 aa7.46□□□□□ -1.22
CHD9-219ENST00000569225 RTN4RL2Q86UN3 420 aa7.46□□□□□ -1.22
CHD9-219ENST00000569225 DGCR14Q96DF8 476 aaKnown RBP7.46□□□□□ -1.22
CHD9-219ENST00000569225 SUCNR1Q9BXA5 334 aa7.46□□□□□ -1.22
CHD9-219ENST00000569225 TAF9BQ9HBM6 251 aa7.46□□□□□ -1.22
CHD9-219ENST00000569225 MBNL3Q9NUK0 354 aaKnown RBP7.46□□□□□ -1.22
CHD9-219ENST00000569225 IDI2-AS1Q9NZ38 188 aa7.46□□□□□ -1.22
CHD9-219ENST00000569225 NAV3Q8IVL0 2385 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 C12orf77C9JDV5 145 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 RNASEK-C17orf49H0YIS7 233 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 NPFFO15130 113 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 XRCC3O43542 346 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 PEX14O75381 377 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 IFNA2P01563 188 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 RCC1P18754 421 aaPredicted RBP7.45□□□□□ -1.22
CHD9-219ENST00000569225 NFYBP25208 207 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 LGALS4P56470 323 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 RBMS3Q6XE24 437 aaKnown RBP7.45□□□□□ -1.22
CHD9-219ENST00000569225 PDZD9Q8IXQ8 264 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 PNKDQ8N490 385 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 OR52M1Q8NGK5 317 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 RFESDQ8TAC1 157 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 KIRREL1Q96J84 757 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 CLEC7AQ9BXN2 247 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 ZMAT3Q9HA38 289 aaKnown RBP7.45□□□□□ -1.22
CHD9-219ENST00000569225 KCNK7Q9Y2U2 307 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 FAM96BQ9Y3D0 163 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 FN1P02751 2386 aaKnown RBP7.45□□□□□ -1.22
CHD9-219ENST00000569225 SETD2Q9BYW2 2564 aaPredicted RBP7.45□□□□□ -1.22
CHD9-219ENST00000569225 FAM25AB3EWG3 89 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 FAM25CB3EWG5 89 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 FAM25GB3EWG6 89 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 C15orf65H3BRN8 121 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 SDCBPO00560 298 aaPredicted RBP7.45□□□□□ -1.22
CHD9-219ENST00000569225 TOR1AO14656 332 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 RGS5O15539 181 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 HPGDSO60760 199 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 HBZP02008 142 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 OMGP23515 440 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 DTYMKP23919 212 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 CD34P28906 385 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 KIR2DS4P43632 304 aa7.45□□□□□ -1.22
CHD9-219ENST00000569225 PRRX1P54821 245 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms