RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 CD34P28906 385 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 RAB11BQ15907 218 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 HES5Q5TA89 166 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 Q6ZPA2 131 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 OR2W3Q7Z3T1 314 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 KCNG3Q8TAE7 436 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 MRGPRDQ8TDS7 321 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 SULT4A1Q9BR01 284 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 CLEC7AQ9BXN2 247 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 MEGF9Q9H1U4 602 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 PLGRKTQ9HBL7 147 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 FBLN5Q9UBX5 448 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 FAM96BQ9Y3D0 163 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 TBL2Q9Y4P3 447 aaKnown RBP7.94□□□□□ -1.14
CLK3-220ENST00000567992 PEX16Q9Y5Y5 336 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 V9GY05 133 aa7.94□□□□□ -1.14
CLK3-220ENST00000567992 A0A087WXM4 84 aa7.93□□□□□ -1.14
CLK3-220ENST00000567992 TMEM272A0A1B0GTI8 110 aa7.93□□□□□ -1.14
CLK3-220ENST00000567992 IFITM5A6NNB3 132 aa7.93□□□□□ -1.14
CLK3-220ENST00000567992 PAHP00439 452 aa7.93□□□□□ -1.14
CLK3-220ENST00000567992 GLAP06280 429 aa7.93□□□□□ -1.14
CLK3-220ENST00000567992 HKR1P10072 659 aa7.93□□□□□ -1.14
CLK3-220ENST00000567992 ARSBP15848 533 aa7.93□□□□□ -1.14
CLK3-220ENST00000567992 GADD45AP24522 165 aa7.93□□□□□ -1.14
CLK3-220ENST00000567992 MYL9P24844 172 aa7.93□□□□□ -1.14
CLK3-220ENST00000567992 COMPP49747 757 aaPredicted RBP7.93□□□□□ -1.14
CLK3-220ENST00000567992 RELBQ01201 579 aa7.93□□□□□ -1.14
CLK3-220ENST00000567992 C16orf87Q6PH81 154 aa7.93□□□□□ -1.14
CLK3-220ENST00000567992 FAM89BQ8N5H3 189 aa7.93□□□□□ -1.14
CLK3-220ENST00000567992 OR51D1Q8NGF3 324 aa7.93□□□□□ -1.14
CLK3-220ENST00000567992 MRPL30Q8TCC3 161 aaKnown RBP7.93□□□□□ -1.14
CLK3-220ENST00000567992 PIFOQ8TCI5 191 aa7.93□□□□□ -1.14
CLK3-220ENST00000567992 FAM3DQ96BQ1 224 aa7.93□□□□□ -1.14
CLK3-220ENST00000567992 RNF167Q9H6Y7 350 aa7.93□□□□□ -1.14
CLK3-220ENST00000567992 TNFRSF19Q9NS68 423 aa7.93□□□□□ -1.14
CLK3-220ENST00000567992 ETAA1Q9NY74 926 aa7.93□□□□□ -1.14
CLK3-220ENST00000567992 IDI2-AS1Q9NZ38 188 aa7.93□□□□□ -1.14
CLK3-220ENST00000567992 STEAP1Q9UHE8 339 aa7.93□□□□□ -1.14
CLK3-220ENST00000567992 VPREB3Q9UKI3 123 aa7.93□□□□□ -1.14
CLK3-220ENST00000567992 CMYA5Q8N3K9 4069 aa7.93□□□□□ -1.14
CLK3-220ENST00000567992 A0A0B4J203 849 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 UBE2QL1A1L167 161 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 SMIM30A4D0T7 59 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 FAM181BA6NEQ2 426 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 C12orf77C9JDV5 145 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 MCRIP1C9JLW8 97 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 H3BUX3 64 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 ZNF701M0R085 212 aaPredicted RBP7.92□□□□□ -1.14
CLK3-220ENST00000567992 AIPO00170 330 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 PDCD5O14737 125 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 GPR137BO60478 399 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 CD36P16671 472 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 JUNBP17275 347 aaPredicted RBP7.92□□□□□ -1.14
CLK3-220ENST00000567992 RAB3BP20337 219 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 PSMD7P51665 324 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 EFNB2P52799 333 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 ACTG1P63261 375 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 RBM39Q14498 530 aaKnown RBP7.92□□□□□ -1.14
CLK3-220ENST00000567992 AANATQ16613 207 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 LRRC75BQ2VPJ9 315 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 C2orf76Q3KRA6 126 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 NKAPLQ5M9Q1 402 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 MINOS1Q5TGZ0 78 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 OR52W1Q6IF63 320 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 FAM53AQ6NSI3 398 aaPredicted RBP7.92□□□□□ -1.14
CLK3-220ENST00000567992 C6orf201Q7Z4U5 140 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 ABHD12Q8N2K0 398 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 ZNF565Q8N9K5 539 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 RFESDQ8TAC1 157 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 UBALD1Q8TB05 177 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 NEK7Q8TDX7 302 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 CCDC107Q8WV48 283 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 YIPF6Q96EC8 236 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 CHCHD6Q9BRQ6 235 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 CENPOQ9BU64 300 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 MBNL3Q9NUK0 354 aaKnown RBP7.92□□□□□ -1.14
CLK3-220ENST00000567992 CEPT1Q9Y6K0 416 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 MINOS1-NBL1R4GNA1 71 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 TRRAPQ9Y4A5 3859 aa7.92□□□□□ -1.14
CLK3-220ENST00000567992 LY6LH3BQJ8 138 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 F2RL2O00254 374 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 SOCS1O15524 211 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 ORC5O43913 435 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 CA11O75493 328 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 NAPSAO96009 420 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 CLEC2LP0C7M8 214 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 SLC2A2P11168 524 aaPredicted RBP7.91□□□□□ -1.14
CLK3-220ENST00000567992 RCC1P18754 421 aaPredicted RBP7.91□□□□□ -1.14
CLK3-220ENST00000567992 LGALS4P56470 323 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 TMEM50BP56557 158 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 LOXL3P58215 753 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 HLA-DRB5Q30154 266 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 AWAT1Q58HT5 328 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 PLAC9Q5JTB6 97 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 C5orf24Q7Z6I8 188 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 OR10A7Q8NGE5 316 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 OR4K15Q8NH41 348 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 OR5R1Q8NH85 324 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 LEAP2Q969E1 77 aa7.91□□□□□ -1.14
CLK3-220ENST00000567992 MALSU1Q96EH3 234 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms