RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 NPBWR2P48146 333 aa11.07□□□□□ -0.64
CLK3-218ENST00000566926 GNG2P59768 71 aa11.07□□□□□ -0.64
CLK3-218ENST00000566926 ARF6P62330 175 aa11.07□□□□□ -0.64
CLK3-218ENST00000566926 MRPS15P82914 257 aaKnown RBP11.07□□□□□ -0.64
CLK3-218ENST00000566926 DGCR2P98153 550 aa11.07□□□□□ -0.64
CLK3-218ENST00000566926 DYRK1AQ13627 763 aa11.07□□□□□ -0.64
CLK3-218ENST00000566926 TAF9Q16594 264 aa11.07□□□□□ -0.64
CLK3-218ENST00000566926 MOGAT2Q3SYC2 334 aa11.07□□□□□ -0.64
CLK3-218ENST00000566926 DUX4L9Q6RFH8 374 aaPredicted RBP11.07□□□□□ -0.64
CLK3-218ENST00000566926 TOMM5Q8N4H5 51 aa11.07□□□□□ -0.64
CLK3-218ENST00000566926 KIR3DL3Q8N743 410 aa11.07□□□□□ -0.64
CLK3-218ENST00000566926 LY6G5BQ8NDX9 201 aa11.07□□□□□ -0.64
CLK3-218ENST00000566926 TMEM185AQ8NFB2 350 aa11.07□□□□□ -0.64
CLK3-218ENST00000566926 C8orf46Q8TAG6 207 aa11.07□□□□□ -0.64
CLK3-218ENST00000566926 NICN1Q9BSH3 213 aa11.07□□□□□ -0.64
CLK3-218ENST00000566926 ZMAT3Q9HA38 289 aaKnown RBP11.07□□□□□ -0.64
CLK3-218ENST00000566926 RBFOX1Q9NWB1 397 aaKnown RBP11.07□□□□□ -0.64
CLK3-218ENST00000566926 DUX4Q9UBX2 424 aa11.07□□□□□ -0.64
CLK3-218ENST00000566926 MTFP1Q9UDX5 166 aa11.07□□□□□ -0.64
CLK3-218ENST00000566926 ZNF222Q9UK12 451 aa11.07□□□□□ -0.64
CLK3-218ENST00000566926 TRBV23-1A0A0A0MS06 115 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 A0A1W2PPH5 198 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 TMEM235A6NFC5 223 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 NAP1L6A6NFF2 107 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 GEMIN2O14893 280 aaKnown RBP11.06□□□□□ -0.64
CLK3-218ENST00000566926 SOCS1O15524 211 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 FCN3O75636 299 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 OR7C1O76099 320 aaPredicted RBP11.06□□□□□ -0.64
CLK3-218ENST00000566926 KNG1P01042 644 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 MMP9P14780 707 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 PRKACAP17612 351 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 GABRR1P24046 479 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 CHATP28329 748 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 RCVRNP35243 200 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 GDNFP39905 211 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 SRSF2Q01130 221 aaKnown RBP11.06□□□□□ -0.64
CLK3-218ENST00000566926 IFITM3Q01628 133 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 RBM39Q14498 530 aaKnown RBP11.06□□□□□ -0.64
CLK3-218ENST00000566926 ZNF146Q15072 292 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 PLAC9Q5JTB6 97 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 ZNF57Q68EA5 555 aaPredicted RBP11.06□□□□□ -0.64
CLK3-218ENST00000566926 DTX3Q8N9I9 347 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 POC5Q8NA72 575 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 ZNRF1Q8ND25 227 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 OR52I2Q8NH67 350 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 FAM216AQ8WUB2 273 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 ARHGAP5-AS1Q96IT6 56 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 ZNF488Q96MN9 340 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 CHST6Q9GZX3 395 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 SIRPDQ9H106 197 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 RIMS4Q9H426 269 aaPredicted RBP11.06□□□□□ -0.64
CLK3-218ENST00000566926 RCC2Q9P258 522 aaKnown RBP11.06□□□□□ -0.64
CLK3-218ENST00000566926 ONECUT1Q9UBC0 465 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 MAB21L2Q9Y586 359 aa11.06□□□□□ -0.64
CLK3-218ENST00000566926 ORC5O43913 435 aa11.05□□□□□ -0.64
CLK3-218ENST00000566926 CD3GP09693 182 aa11.05□□□□□ -0.64
CLK3-218ENST00000566926 SELLP14151 372 aa11.05□□□□□ -0.64
CLK3-218ENST00000566926 GNB3P16520 340 aa11.05□□□□□ -0.64
CLK3-218ENST00000566926 TMEM50BP56557 158 aa11.05□□□□□ -0.64
CLK3-218ENST00000566926 MADCAM1Q13477 382 aa11.05□□□□□ -0.64
CLK3-218ENST00000566926 ARFRP1Q13795 201 aa11.05□□□□□ -0.64
CLK3-218ENST00000566926 TUSC1Q2TAM9 212 aa11.05□□□□□ -0.64
CLK3-218ENST00000566926 PIGYQ3MUY2 71 aa11.05□□□□□ -0.64
CLK3-218ENST00000566926 C1orf122Q6ZSJ8 110 aa11.05□□□□□ -0.64
CLK3-218ENST00000566926 SIGLECL1Q8N7X8 197 aa11.05□□□□□ -0.64
CLK3-218ENST00000566926 CHPT1Q8WUD6 406 aa11.05□□□□□ -0.64
CLK3-218ENST00000566926 TBX15Q96SF7 602 aa11.05□□□□□ -0.64
CLK3-218ENST00000566926 PECRQ9BY49 303 aa11.05□□□□□ -0.64
CLK3-218ENST00000566926 FAM234AQ9H0X4 552 aa11.05□□□□□ -0.64
CLK3-218ENST00000566926 OR14J1Q9UGF5 321 aa11.05□□□□□ -0.64
CLK3-218ENST00000566926 IGHV3OR16-10A0A075B7F0 116 aa11.04□□□□□ -0.64
CLK3-218ENST00000566926 ANKRD20A5PA0PJZ0 165 aa11.04□□□□□ -0.64
CLK3-218ENST00000566926 MCRIP1C9JLW8 97 aa11.04□□□□□ -0.64
CLK3-218ENST00000566926 M0R1W7 72 aa11.04□□□□□ -0.64
CLK3-218ENST00000566926 SH2D1BO14796 132 aa11.04□□□□□ -0.64
CLK3-218ENST00000566926 LYRM1O43325 122 aa11.04□□□□□ -0.64
CLK3-218ENST00000566926 DTYMKP23919 212 aa11.04□□□□□ -0.64
CLK3-218ENST00000566926 KCNJ3P48549 501 aa11.04□□□□□ -0.64
CLK3-218ENST00000566926 TAS2R19P59542 299 aa11.04□□□□□ -0.64
CLK3-218ENST00000566926 GUCA2AQ02747 115 aa11.04□□□□□ -0.64
CLK3-218ENST00000566926 BAMBIQ13145 260 aa11.04□□□□□ -0.64
CLK3-218ENST00000566926 KLF9Q13886 244 aaPredicted RBP11.04□□□□□ -0.64
CLK3-218ENST00000566926 TRIM16LQ309B1 348 aa11.04□□□□□ -0.64
CLK3-218ENST00000566926 ACTBL2Q562R1 376 aa11.04□□□□□ -0.64
CLK3-218ENST00000566926 NKAPLQ5M9Q1 402 aa11.04□□□□□ -0.64
CLK3-218ENST00000566926 VMO1Q7Z5L0 202 aa11.04□□□□□ -0.64
CLK3-218ENST00000566926 TRAPPC6BQ86SZ2 158 aa11.04□□□□□ -0.64
CLK3-218ENST00000566926 BCL6BQ8N143 479 aaPredicted RBP11.04□□□□□ -0.64
CLK3-218ENST00000566926 FGFRL1Q8N441 504 aa11.04□□□□□ -0.64
CLK3-218ENST00000566926 CD177Q8N6Q3 437 aa11.04□□□□□ -0.64
CLK3-218ENST00000566926 LHX4Q969G2 390 aa11.04□□□□□ -0.64
CLK3-218ENST00000566926 ZDHHC16Q969W1 377 aa11.04□□□□□ -0.64
CLK3-218ENST00000566926 OCSTAMPQ9BR26 566 aa11.04□□□□□ -0.64
CLK3-218ENST00000566926 IFT46Q9NQC8 304 aa11.04□□□□□ -0.64
CLK3-218ENST00000566926 COPZ2Q9P299 210 aa11.04□□□□□ -0.64
CLK3-218ENST00000566926 TBC1D24Q9ULP9 559 aa11.04□□□□□ -0.64
CLK3-218ENST00000566926 KIAA2026Q5HYC2 2103 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 IGHV1-69DA0A0B4J2H0 117 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 CENPVL3A0A0U1RRI6 287 aa11.03□□□□□ -0.64
CLK3-218ENST00000566926 hCG_1809904A0A1W2PP81 198 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms