RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 NAT2P11245 290 aa9.98□□□□□ -0.81
CDH1-210ENST00000566612 P2RY1P47900 373 aa9.98□□□□□ -0.81
CDH1-210ENST00000566612 FGF8P55075 233 aaPredicted RBP9.98□□□□□ -0.81
CDH1-210ENST00000566612 NAAAQ02083 359 aa9.98□□□□□ -0.81
CDH1-210ENST00000566612 ZNF385CQ66K41 422 aaPredicted RBP9.98□□□□□ -0.81
CDH1-210ENST00000566612 ZNF826PQ6ZT77 177 aa9.98□□□□□ -0.81
CDH1-210ENST00000566612 POC1AQ8NBT0 407 aa9.98□□□□□ -0.81
CDH1-210ENST00000566612 OR1K1Q8NGR3 316 aa9.98□□□□□ -0.81
CDH1-210ENST00000566612 LHFPL5Q8TAF8 219 aa9.98□□□□□ -0.81
CDH1-210ENST00000566612 NTNG2Q96CW9 530 aa9.98□□□□□ -0.81
CDH1-210ENST00000566612 NUDT16L1Q9BRJ7 211 aaKnown RBP9.98□□□□□ -0.81
CDH1-210ENST00000566612 HSF4Q9ULV5 492 aa9.98□□□□□ -0.81
CDH1-210ENST00000566612 hCG_38984A0A1B0GV85 526 aa9.98□□□□□ -0.81
CDH1-210ENST00000566612 BMP5P22003 454 aa9.98□□□□□ -0.81
CDH1-210ENST00000566612 Q3ZCU0 254 aa9.98□□□□□ -0.81
CDH1-210ENST00000566612 WFDC8Q8IUA0 241 aa9.98□□□□□ -0.81
CDH1-210ENST00000566612 NECAP1Q8NC96 275 aa9.98□□□□□ -0.81
CDH1-210ENST00000566612 TMEM230Q96A57 120 aa9.98□□□□□ -0.81
CDH1-210ENST00000566612 HIPK2Q9H2X6 1198 aa9.98□□□□□ -0.81
CDH1-210ENST00000566612 ZNF727A8MUV8 499 aa9.98□□□□□ -0.81
CDH1-210ENST00000566612 PMELP40967 661 aa9.98□□□□□ -0.81
CDH1-210ENST00000566612 RPP30P78346 268 aaKnown RBP9.98□□□□□ -0.81
CDH1-210ENST00000566612 AESQ08117 197 aa9.98□□□□□ -0.81
CDH1-210ENST00000566612 OR2W1Q9Y3N9 320 aa9.98□□□□□ -0.81
CDH1-210ENST00000566612 DOCK10Q96BY6 2186 aa9.98□□□□□ -0.81
CDH1-210ENST00000566612 PRUNE2Q8WUY3 3088 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 NTN3O00634 580 aaPredicted RBP9.97□□□□□ -0.81
CDH1-210ENST00000566612 CEBPDP49716 269 aaPredicted RBP9.97□□□□□ -0.81
CDH1-210ENST00000566612 C4orf17Q53FE4 359 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 LRRC29Q8WV35 223 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 AQP10Q96PS8 301 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 PFDN5Q99471 154 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 RNF126Q9BV68 326 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 DDA1Q9BW61 102 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 SLC35B3Q9H1N7 401 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 LIPGQ9Y5X9 500 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 WSB1Q9Y6I7 421 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 C9orf172C9J069 976 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 SRSF10O75494 262 aaKnown RBP9.97□□□□□ -0.81
CDH1-210ENST00000566612 ATP6V0CP27449 155 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 PSMB3P49720 205 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 TAS2R30P59541 319 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 IGFBP7Q16270 282 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 RNF166Q96A37 237 aaPredicted RBP9.97□□□□□ -0.81
CDH1-210ENST00000566612 NRIP2Q9BQI9 281 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 ZNF703Q9H7S9 590 aaPredicted RBP9.97□□□□□ -0.81
CDH1-210ENST00000566612 PNRC2Q9NPJ4 139 aaKnown RBP9.97□□□□□ -0.81
CDH1-210ENST00000566612 ZNF581Q9P0T4 197 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 RCC2Q9P258 522 aaKnown RBP9.97□□□□□ -0.81
CDH1-210ENST00000566612 ZNF716A6NP11 495 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 CDS2O95674 445 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 HOXD4P09016 255 aaPredicted RBP9.97□□□□□ -0.81
CDH1-210ENST00000566612 ACP1P24666 158 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 NPBWR1P48145 328 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 H3F3AP84243 136 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 ADAMTS17Q8TE56 1095 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 HPSE2Q8WWQ2 592 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 NABP1Q96AH0 204 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 MOB3AQ96BX8 217 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 TP53RKQ96S44 253 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 ARV1Q9H2C2 271 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 POMT1Q9Y6A1 747 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 PCNX3Q9H6A9 2034 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 M0R1X1 148 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 EIF3GO75821 320 aaKnown RBP eCLIP9.97□□□□□ -0.81
CDH1-210ENST00000566612 AWAT1Q58HT5 328 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 TM2D1Q9BX74 207 aa9.97□□□□□ -0.81
CDH1-210ENST00000566612 ZNF318Q5VUA4 2279 aa9.96□□□□□ -0.81
CDH1-210ENST00000566612 SYNGR2O43760 224 aa9.96□□□□□ -0.81
CDH1-210ENST00000566612 FCGR3BO75015 233 aa9.96□□□□□ -0.81
CDH1-210ENST00000566612 SCAF4O95104 1147 aaKnown RBP9.96□□□□□ -0.81
CDH1-210ENST00000566612 OR8U8P0C7N1 319 aa9.96□□□□□ -0.81
CDH1-210ENST00000566612 SNRPEP62304 92 aaKnown RBP9.96□□□□□ -0.81
CDH1-210ENST00000566612 HLA-DRB3P79483 266 aa9.96□□□□□ -0.81
CDH1-210ENST00000566612 HIST2H3AQ71DI3 136 aa9.96□□□□□ -0.81
CDH1-210ENST00000566612 PRDM14Q9GZV8 571 aa9.96□□□□□ -0.81
CDH1-210ENST00000566612 DNAH14Q0VDD8 3507 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 LRRC3CA6NJW4 275 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 PCNX2A6NKB5 2137 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 C17orf112F2Z3M2 114 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 HAND1O96004 215 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 CCL1P22362 96 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 RAB4BP61018 213 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 Q0VFX4 171 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 EIF2S3LQ2VIR3 472 aaKnown RBP9.96□□□□□ -0.82
CDH1-210ENST00000566612 C5orf24Q7Z6I8 188 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 ZNF429Q86V71 674 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 OR4F5Q8NH21 305 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 MARVELD3Q96A59 401 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 OR4F4Q96R69 305 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 RAB40CQ96S21 281 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 C12orf57Q99622 126 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 SEC11CQ9BY50 192 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 TMEM222Q9H0R3 208 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 SH3BGRL3Q9H299 93 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 RAB9BQ9NP90 201 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 NIT2Q9NQR4 276 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 FBLN5Q9UBX5 448 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 AKAP6Q13023 2319 aa9.96□□□□□ -0.82
CDH1-210ENST00000566612 A8MXK9 166 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms