RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 APOA1P02647 267 aa9.43□□□□□ -0.9
KARS-207ENST00000566560 CD3GP09693 182 aa9.43□□□□□ -0.9
KARS-207ENST00000566560 ZNF728P0DKX0 622 aa9.43□□□□□ -0.9
KARS-207ENST00000566560 ARF6P62330 175 aa9.43□□□□□ -0.9
KARS-207ENST00000566560 MRPS15P82914 257 aaKnown RBP9.43□□□□□ -0.9
KARS-207ENST00000566560 PAX8Q06710 450 aa9.43□□□□□ -0.9
KARS-207ENST00000566560 CR1LQ2VPA4 569 aa9.43□□□□□ -0.9
KARS-207ENST00000566560 TMEM69Q5SWH9 247 aa9.43□□□□□ -0.9
KARS-207ENST00000566560 Q71RC1 249 aaPredicted RBP9.43□□□□□ -0.9
KARS-207ENST00000566560 MOB1BQ7L9L4 216 aa9.43□□□□□ -0.9
KARS-207ENST00000566560 LAX1Q8IWV1 398 aa9.43□□□□□ -0.9
KARS-207ENST00000566560 IZUMO1Q8IYV9 350 aa9.43□□□□□ -0.9
KARS-207ENST00000566560 GAPTQ8N292 157 aa9.43□□□□□ -0.9
KARS-207ENST00000566560 OR4K15Q8NH41 348 aa9.43□□□□□ -0.9
KARS-207ENST00000566560 MRPL30Q8TCC3 161 aaKnown RBP9.43□□□□□ -0.9
KARS-207ENST00000566560 CCDC107Q8WV48 283 aa9.43□□□□□ -0.9
KARS-207ENST00000566560 S100A16Q96FQ6 103 aaKnown RBP9.43□□□□□ -0.9
KARS-207ENST00000566560 WDFY2Q96P53 400 aa9.43□□□□□ -0.9
KARS-207ENST00000566560 CMSS1Q9BQ75 279 aaKnown RBP9.43□□□□□ -0.9
KARS-207ENST00000566560 HDHD3Q9BSH5 251 aaPredicted RBP9.43□□□□□ -0.9
KARS-207ENST00000566560 PCGF1Q9BSM1 259 aa9.43□□□□□ -0.9
KARS-207ENST00000566560 SIRPDQ9H106 197 aa9.43□□□□□ -0.9
KARS-207ENST00000566560 NCOR1P1Q9H4R4 102 aa9.43□□□□□ -0.9
KARS-207ENST00000566560 BATF3Q9NR55 127 aa9.43□□□□□ -0.9
KARS-207ENST00000566560 SIRT7Q9NRC8 400 aa9.43□□□□□ -0.9
KARS-207ENST00000566560 ADAM30Q9UKF2 790 aa9.43□□□□□ -0.9
KARS-207ENST00000566560 TRAPPC2LQ9UL33 140 aa9.43□□□□□ -0.9
KARS-207ENST00000566560 KCNK7Q9Y2U2 307 aa9.43□□□□□ -0.9
KARS-207ENST00000566560 AUP1Q9Y679 476 aa9.43□□□□□ -0.9
KARS-207ENST00000566560 TEP1Q99973 2627 aaKnown RBP9.42□□□□□ -0.9
KARS-207ENST00000566560 TRAV18A0A075B6X5 111 aa9.42□□□□□ -0.9
KARS-207ENST00000566560 TRAV39A0A0B4J263 110 aa9.42□□□□□ -0.9
KARS-207ENST00000566560 TRAV40A0A0B4J280 105 aa9.42□□□□□ -0.9
KARS-207ENST00000566560 hCG_1809904A0A1W2PP81 198 aa9.42□□□□□ -0.9
KARS-207ENST00000566560 A0A1W2PPE2 198 aa9.42□□□□□ -0.9
KARS-207ENST00000566560 A0A1W2PR64 198 aa9.42□□□□□ -0.9
KARS-207ENST00000566560 A0A1W2PRV1 198 aa9.42□□□□□ -0.9
KARS-207ENST00000566560 TMEM235A6NFC5 223 aa9.42□□□□□ -0.9
KARS-207ENST00000566560 ZNF729A6NN14 1252 aaPredicted RBP9.42□□□□□ -0.9
KARS-207ENST00000566560 TOX4O94842 621 aa9.42□□□□□ -0.9
KARS-207ENST00000566560 NAPSAO96009 420 aa9.42□□□□□ -0.9
KARS-207ENST00000566560 MT-ND4P03905 459 aa9.42□□□□□ -0.9
KARS-207ENST00000566560 GSTP1P09211 210 aaKnown RBP9.42□□□□□ -0.9
KARS-207ENST00000566560 MMP9P14780 707 aa9.42□□□□□ -0.9
KARS-207ENST00000566560 ELK1P19419 428 aa9.42□□□□□ -0.9
KARS-207ENST00000566560 SSTR5P35346 364 aa9.42□□□□□ -0.9
KARS-207ENST00000566560 DLX6P56179 175 aa9.42□□□□□ -0.9
KARS-207ENST00000566560 TAS2R20P59543 309 aa9.42□□□□□ -0.9
KARS-207ENST00000566560 GNG2P59768 71 aa9.42□□□□□ -0.9
KARS-207ENST00000566560 ARFRP1Q13795 201 aa9.42□□□□□ -0.9
KARS-207ENST00000566560 C6orf183Q5T699 404 aa9.42□□□□□ -0.9
KARS-207ENST00000566560 VMO1Q7Z5L0 202 aa9.42□□□□□ -0.9
KARS-207ENST00000566560 SETD6Q8TBK2 473 aa9.42□□□□□ -0.9
KARS-207ENST00000566560 TBX15Q96SF7 602 aa9.42□□□□□ -0.9
KARS-207ENST00000566560 RIMS4Q9H426 269 aaPredicted RBP9.42□□□□□ -0.9
KARS-207ENST00000566560 METTL8Q9H825 291 aaKnown RBP9.42□□□□□ -0.9
KARS-207ENST00000566560 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.42□□□□□ -0.9
KARS-207ENST00000566560 TAS2R3Q9NYW6 316 aa9.42□□□□□ -0.9
KARS-207ENST00000566560 CALYQ9NYX4 217 aa9.42□□□□□ -0.9
KARS-207ENST00000566560 NSD1Q96L73 2696 aaPredicted RBP9.42□□□□□ -0.9
KARS-207ENST00000566560 C17orf98A8MV24 154 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 FAM229AH3BQW9 127 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 CTDSP2O14595 271 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 XRCC3O43542 346 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 EIF4EBP3O60516 100 aaPredicted RBP9.41□□□□□ -0.9
KARS-207ENST00000566560 RBP4P02753 201 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 HNF1AP20823 631 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 VAMP1P23763 118 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 TALDO1P37837 337 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 MNDAP41218 407 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 MADCAM1Q13477 382 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 PNLIPRP3Q17RR3 467 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 ZNF260Q3ZCT1 412 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 CDNFQ49AH0 187 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 FAM120AOSQ5T036 256 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 PRAMEF5Q5TYX0 476 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 HACD4Q5VWC8 232 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 TRAT1Q6PIZ9 186 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 ZNF782Q6ZMW2 699 aaPredicted RBP9.41□□□□□ -0.9
KARS-207ENST00000566560 Q8N7P7 452 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 DTX3Q8N9I9 347 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 ZNF565Q8N9K5 539 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 NUDCD2Q8WVJ2 157 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 CORO2AQ92828 525 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 UPRTQ96BW1 309 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 NXF2Q9GZY0 626 aaKnown RBP9.41□□□□□ -0.9
KARS-207ENST00000566560 MIXL1Q9H2W2 232 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 TMEM160Q9NX00 188 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 EXTL2Q9UBQ6 330 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 OPN4Q9UHM6 478 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 NAV3Q8IVL0 2385 aa9.41□□□□□ -0.9
KARS-207ENST00000566560 TRBV6-6A0A0A6YYG2 114 aa9.4□□□□□ -0.9
KARS-207ENST00000566560 KBTBD11-OT1A0A1B0GTJ5 212 aa9.4□□□□□ -0.9
KARS-207ENST00000566560 C12orf77C9JDV5 145 aa9.4□□□□□ -0.9
KARS-207ENST00000566560 FCGR3AP08637 254 aa9.4□□□□□ -0.9
KARS-207ENST00000566560 IGHV1-8P0DP01 117 aa9.4□□□□□ -0.9
KARS-207ENST00000566560 RCC1P18754 421 aaPredicted RBP9.4□□□□□ -0.9
KARS-207ENST00000566560 OMGP23515 440 aa9.4□□□□□ -0.9
KARS-207ENST00000566560 DLX1P56177 255 aa9.4□□□□□ -0.9
KARS-207ENST00000566560 ERVFRD-1P60508 538 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms