RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 SPPL2BQ8TCT7 592 aa2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 EEF1AKMT1Q8WVE0 214 aa2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 TMEM158Q8WZ71 300 aa2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 PTX4Q96A99 478 aa2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 CLDN23Q96B33 292 aa2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 SNF8Q96H20 258 aa2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 ZIM3Q96PE6 472 aa2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 RNF157Q96PX1 679 aa2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 SDHCQ99643 169 aaPredicted RBP2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 PRRT1Q99946 306 aa2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 HOPXQ9BPY8 73 aaPredicted RBP2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 RTBDNQ9BSG5 229 aaPredicted RBP2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 CDC42EP4Q9H3Q1 356 aaKnown RBP2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 ASB7Q9H672 318 aa2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 WFDC1Q9HC57 220 aa2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 PARVAQ9NVD7 372 aa2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 RAB26Q9ULW5 256 aa2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 POLR1DQ9Y2S0 133 aa2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 SLC22A7Q9Y694 548 aa2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 ZNF780BQ9Y6R6 833 aa2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 PKD1L3Q7Z443 1732 aa2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 UBR1Q8IWV7 1749 aa2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 LAMC1P11047 1609 aa2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 SLIT1O75093 1534 aa2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 MIA2Q96PC5 1412 aa2.42□□□□□ -2.02
HERPUD1-211ENST00000566550 NUP153P49790 1475 aaKnown RBP2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 NCOA2Q15596 1464 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 A0A0G2JMP0 313 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 A0A0J9YWU9 116 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 KLF18A0A0U1RQI7 1052 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 A0A0X1KG70 313 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 LOC105371267A0A1B0GV96 52 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 GNG14A0A1W2PPG7 69 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 PLAC8L1A1L4L8 177 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 FAM183AA6NL82 134 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 ZFP92A6NM28 416 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 SRRM5B3KS81 715 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 KRBOX1C9JBD0 128 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 KRTAP4-16G5E9R7 235 aaPredicted RBP2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 CNMDO75829 334 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 SLC25A14O95258 325 aaPredicted RBP2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 IGLV2-23P01705 113 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 S100A2P29034 98 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 PSME3P61289 254 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 MEF2CQ06413 473 aaPredicted RBP2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 PNOCQ13519 176 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 KIAA0040Q15053 153 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 LRRC26Q2I0M4 334 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 ZNF404Q494X3 552 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 ATP6AP1LQ52LC2 224 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 SLC25A30Q5SVS4 291 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 TMEM215Q68D42 235 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 TMED4Q7Z7H5 227 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 CAMK2N1Q7Z7J9 78 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 DOLPP1Q86YN1 238 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 CEND1Q8N111 149 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 CD177Q8N6Q3 437 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 C14orf178Q8N769 122 aaPredicted RBP2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 Q8WTZ3 238 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 ABHD3Q8WU67 409 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 RAD51AP1Q96B01 352 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 ZNF689Q96CS4 500 aaPredicted RBP2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 C16orf74Q96GX8 76 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 OR2M2Q96R28 347 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 SIGMAR1Q99720 223 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 SAMD10Q9BYL1 202 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 ZNF436Q9C0F3 470 aaPredicted RBP2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 TRABDQ9H4I3 376 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 BATF3Q9NR55 127 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 NUFIP1Q9UHK0 495 aaKnown RBP2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 PSG11Q9UQ72 335 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 KLF13Q9Y2Y9 288 aaPredicted RBP2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 PRELID3BQ9Y3B1 194 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 HDGFL3Q9Y3E1 203 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 ZNF706Q9Y5V0 76 aaPredicted RBP2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 YTHDC2Q9H6S0 1430 aaKnown RBP2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 RIMS2Q9UQ26 1411 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 ATRXP46100 2492 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 THSD7AQ9UPZ6 1657 aa2.41□□□□□ -2.02
HERPUD1-211ENST00000566550 VWA8A3KMH1 1905 aa2.4□□□□□ -2.02
HERPUD1-211ENST00000566550 CHD2O14647 1828 aaKnown RBP2.4□□□□□ -2.02
HERPUD1-211ENST00000566550 VCANP13611 3396 aa2.4□□□□□ -2.02
HERPUD1-211ENST00000566550 COL24A1Q17RW2 1714 aa2.4□□□□□ -2.02
HERPUD1-211ENST00000566550 PGPA6NDG6 321 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 EPOPA6NHQ4 379 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 DISC1C4P0D8 188 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 LAD1O00515 517 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 FFAR1O14842 300 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 CA2P00918 260 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 HBZP02008 142 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 OR4A8P0C604 315 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 MYL12AP19105 171 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 CTRLP40313 264 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 NMUP48645 174 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 MEOX2P50222 304 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 PFN3P60673 137 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 SNAP25P60880 206 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 RAB2AP61019 212 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 NAA20P61599 178 aa2.4□□□□□ -2.03
HERPUD1-211ENST00000566550 KRR1Q13601 381 aaKnown RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms