RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 CMTM1Q8IZ96 169 aa9.44□□□□□ -0.9
TCF4-232ENST00000566286 SPEM1Q8N4L4 309 aa9.44□□□□□ -0.9
TCF4-232ENST00000566286 SUMF1Q8NBK3 374 aa9.44□□□□□ -0.9
TCF4-232ENST00000566286 CPNE4Q96A23 557 aaPredicted RBP9.44□□□□□ -0.9
TCF4-232ENST00000566286 S100PBPQ96BU1 408 aa9.44□□□□□ -0.9
TCF4-232ENST00000566286 JSRP1Q96MG2 331 aaPredicted RBP9.44□□□□□ -0.9
TCF4-232ENST00000566286 TECTBQ96PL2 329 aa9.44□□□□□ -0.9
TCF4-232ENST00000566286 ZNF385AQ96PM9 386 aaKnown RBP9.44□□□□□ -0.9
TCF4-232ENST00000566286 RASL10BQ96S79 203 aa9.44□□□□□ -0.9
TCF4-232ENST00000566286 ZNF442Q9H7R0 627 aa9.44□□□□□ -0.9
TCF4-232ENST00000566286 C19orf25Q9UFG5 118 aaPredicted RBP9.44□□□□□ -0.9
TCF4-232ENST00000566286 DKKL1Q9UK85 242 aa9.44□□□□□ -0.9
TCF4-232ENST00000566286 SHANK1Q9Y566 2161 aa9.44□□□□□ -0.9
TCF4-232ENST00000566286 TRAV1-1A0A0B4J248 108 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 OR5H1A6NKK0 313 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 FAM90A27PA6NNH2 459 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 DFFBO76075 338 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 TRGC2P03986 189 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 CD63P08962 238 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 MALP21145 153 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 FUT3P21217 361 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 SOX8P57073 446 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 IL24Q13007 206 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 Q6ZS49 121 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 TBC1D26Q86UD7 250 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 SELENOHQ8IZQ5 122 aaKnown RBP9.43□□□□□ -0.9
TCF4-232ENST00000566286 CDX2Q99626 313 aaPredicted RBP9.43□□□□□ -0.9
TCF4-232ENST00000566286 ATP5SQ99766 215 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 DEFB126Q9BYW3 111 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 GLRX2Q9NS18 164 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 HS3ST3B1Q9Y662 390 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 RTTNQ86VV8 2226 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 PIGBOS1A0A0B4J2F0 54 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 IGKV1-12A0A0C4DH73 117 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 LOC102723971A0A1B0GUV8 181 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 TSTD3H0UI37 97 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 TOX3O15405 576 aaPredicted RBP9.43□□□□□ -0.9
TCF4-232ENST00000566286 SYNGR3O43761 229 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 IGKV1D-12P01611 117 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 LCATP04180 440 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 SOD3P08294 240 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 EGR1P18146 543 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 VDAC1P21796 283 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 GNRHRP30968 328 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 RND2P52198 227 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 RBM11P57052 281 aaKnown RBP9.43□□□□□ -0.9
TCF4-232ENST00000566286 TAS2R30P59541 319 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 PKIAP61925 76 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 SRSF7Q16629 238 aaKnown RBP eCLIP9.43□□□□□ -0.9
TCF4-232ENST00000566286 OR2T2Q6IF00 324 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 DBX2Q6ZNG2 339 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 GPR137CQ8N3F9 429 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 C14orf144Q96I85 54 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 FAM210BQ96KR6 192 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 GPR61Q9BZJ8 451 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 RFNGQ9Y644 331 aa9.43□□□□□ -0.9
TCF4-232ENST00000566286 CLDN34H7C241 214 aa9.42□□□□□ -0.9
TCF4-232ENST00000566286 CST7O76096 145 aa9.42□□□□□ -0.9
TCF4-232ENST00000566286 CST2P09228 141 aa9.42□□□□□ -0.9
TCF4-232ENST00000566286 CD200P41217 278 aa9.42□□□□□ -0.9
TCF4-232ENST00000566286 NOVA1P51513 510 aaKnown RBP9.42□□□□□ -0.9
TCF4-232ENST00000566286 NMSQ5H8A3 153 aa9.42□□□□□ -0.9
TCF4-232ENST00000566286 CXorf66Q5JRM2 361 aaPredicted RBP9.42□□□□□ -0.9
TCF4-232ENST00000566286 SPIN3Q5JUX0 258 aa9.42□□□□□ -0.9
TCF4-232ENST00000566286 CDPF1Q6NVV7 123 aa9.42□□□□□ -0.9
TCF4-232ENST00000566286 STX12Q86Y82 276 aa9.42□□□□□ -0.9
TCF4-232ENST00000566286 H1FOOQ8IZA3 346 aaPredicted RBP9.42□□□□□ -0.9
TCF4-232ENST00000566286 OR1F12Q8NHA8 337 aa9.42□□□□□ -0.9
TCF4-232ENST00000566286 IL22RA2Q969J5 263 aa9.42□□□□□ -0.9
TCF4-232ENST00000566286 CLDN23Q96B33 292 aa9.42□□□□□ -0.9
TCF4-232ENST00000566286 C1orf43Q9BWL3 253 aa9.42□□□□□ -0.9
TCF4-232ENST00000566286 MAGT1Q9H0U3 335 aa9.42□□□□□ -0.9
TCF4-232ENST00000566286 SLC7A10Q9NS82 523 aa9.42□□□□□ -0.9
TCF4-232ENST00000566286 CHCHD2Q9Y6H1 151 aaPredicted RBP9.42□□□□□ -0.9
TCF4-232ENST00000566286 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.41□□□□□ -0.9
TCF4-232ENST00000566286 A4D1N5 150 aa9.41□□□□□ -0.9
TCF4-232ENST00000566286 FAM90A10PA6NDY2 464 aa9.41□□□□□ -0.9
TCF4-232ENST00000566286 FAM90A18PA6NE21 464 aa9.41□□□□□ -0.9
TCF4-232ENST00000566286 FAM90A16PA6NEW6 464 aa9.41□□□□□ -0.9
TCF4-232ENST00000566286 FAM90A20PA6NIJ5 464 aa9.41□□□□□ -0.9
TCF4-232ENST00000566286 FAM90A8PA6NJQ4 464 aa9.41□□□□□ -0.9
TCF4-232ENST00000566286 FAM90A7PA6NKC0 464 aa9.41□□□□□ -0.9
TCF4-232ENST00000566286 FAM90A22PA8MWA6 464 aa9.41□□□□□ -0.9
TCF4-232ENST00000566286 FAM90A12PA8MX19 464 aa9.41□□□□□ -0.9
TCF4-232ENST00000566286 FAM90A5PA8MXJ8 464 aa9.41□□□□□ -0.9
TCF4-232ENST00000566286 FAM90A23PA8MXZ1 464 aa9.41□□□□□ -0.9
TCF4-232ENST00000566286 CYB5R3P00387 301 aaPredicted RBP9.41□□□□□ -0.9
TCF4-232ENST00000566286 FAM90A15PP0C7V4 464 aa9.41□□□□□ -0.9
TCF4-232ENST00000566286 FAM90A13PP0C7W8 464 aa9.41□□□□□ -0.9
TCF4-232ENST00000566286 FAM90A14PP0C7W9 464 aa9.41□□□□□ -0.9
TCF4-232ENST00000566286 FAM90A24PP0C7X0 464 aa9.41□□□□□ -0.9
TCF4-232ENST00000566286 TRGC1P0CF51 173 aa9.41□□□□□ -0.9
TCF4-232ENST00000566286 UCP1P25874 307 aa9.41□□□□□ -0.9
TCF4-232ENST00000566286 RUNX1Q01196 453 aa9.41□□□□□ -0.9
TCF4-232ENST00000566286 RSPO4Q2I0M5 234 aaPredicted RBP9.41□□□□□ -0.9
TCF4-232ENST00000566286 PRAMEF20Q5VT98 475 aa9.41□□□□□ -0.9
TCF4-232ENST00000566286 SSX9Q7RTT3 188 aa9.41□□□□□ -0.9
TCF4-232ENST00000566286 TMEM217Q8N7C4 229 aa9.41□□□□□ -0.9
TCF4-232ENST00000566286 GTF3AQ92664 365 aaKnown RBP9.41□□□□□ -0.9
TCF4-232ENST00000566286 SIGLEC12Q96PQ1 595 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms