RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 HSPB7Q9UBY9 170 aa2.56□□□□□ -2
CHD9-218ENST00000566029 BOKQ9UMX3 212 aaPredicted RBP2.56□□□□□ -2
CHD9-218ENST00000566029 TDRD6O60522 2096 aaKnown RBP2.56□□□□□ -2
CHD9-218ENST00000566029 TRAV1-1A0A0B4J248 108 aa2.56□□□□□ -2
CHD9-218ENST00000566029 C7orf71A4D174 169 aa2.56□□□□□ -2
CHD9-218ENST00000566029 WDR1O75083 606 aa2.56□□□□□ -2
CHD9-218ENST00000566029 TNFSF13O75888 250 aa2.56□□□□□ -2
CHD9-218ENST00000566029 KLK1P06870 262 aa2.56□□□□□ -2
CHD9-218ENST00000566029 RPL12P30050 165 aaKnown RBP2.56□□□□□ -2
CHD9-218ENST00000566029 MC5RP33032 325 aa2.56□□□□□ -2
CHD9-218ENST00000566029 OR3A2P47893 321 aa2.56□□□□□ -2
CHD9-218ENST00000566029 GAGE2BQ13066 116 aa2.56□□□□□ -2
CHD9-218ENST00000566029 ZNF266Q14584 549 aa2.56□□□□□ -2
CHD9-218ENST00000566029 GAGE2EQ4V326 116 aa2.56□□□□□ -2
CHD9-218ENST00000566029 GAGE2AQ6NT46 116 aa2.56□□□□□ -2
CHD9-218ENST00000566029 D2HGDHQ8N465 521 aa2.56□□□□□ -2
CHD9-218ENST00000566029 C1orf162Q8NEQ5 155 aaPredicted RBP2.56□□□□□ -2
CHD9-218ENST00000566029 VN1R17PQ8TDU5 208 aa2.56□□□□□ -2
CHD9-218ENST00000566029 WBP2Q969T9 261 aa2.56□□□□□ -2
CHD9-218ENST00000566029 SF3B5Q9BWJ5 86 aaKnown RBP2.56□□□□□ -2
CHD9-218ENST00000566029 ELOVL3Q9HB03 270 aa2.56□□□□□ -2
CHD9-218ENST00000566029 GAGE2DQ9UEU5 116 aa2.56□□□□□ -2
CHD9-218ENST00000566029 CD207Q9UJ71 328 aa2.56□□□□□ -2
CHD9-218ENST00000566029 CES1P1Q9UKY3 287 aa2.56□□□□□ -2
CHD9-218ENST00000566029 FNDC1Q4ZHG4 1894 aaPredicted RBP2.56□□□□□ -2
CHD9-218ENST00000566029 WDR90Q96KV7 1748 aa2.56□□□□□ -2
CHD9-218ENST00000566029 E5RGE8 158 aa2.56□□□□□ -2
CHD9-218ENST00000566029 FCMRO60667 390 aa2.56□□□□□ -2
CHD9-218ENST00000566029 CLDN1O95832 211 aa2.56□□□□□ -2
CHD9-218ENST00000566029 GYPBP06028 91 aa2.56□□□□□ -2
CHD9-218ENST00000566029 SMIM10L2AP0DMW4 78 aa2.56□□□□□ -2
CHD9-218ENST00000566029 SMIM10L2BP0DMW5 78 aa2.56□□□□□ -2
CHD9-218ENST00000566029 AMY2BP19961 511 aa2.56□□□□□ -2
CHD9-218ENST00000566029 UCP1P25874 307 aa2.56□□□□□ -2
CHD9-218ENST00000566029 CEACAM3P40198 252 aa2.56□□□□□ -2
CHD9-218ENST00000566029 RPS24P62847 133 aaKnown RBP2.56□□□□□ -2
CHD9-218ENST00000566029 PAX5Q02548 391 aa2.56□□□□□ -2
CHD9-218ENST00000566029 ZNF816Q0VGE8 651 aaPredicted RBP2.56□□□□□ -2
CHD9-218ENST00000566029 LTC4SQ16873 150 aa2.56□□□□□ -2
CHD9-218ENST00000566029 ANXA2RQ3ZCQ2 193 aa2.56□□□□□ -2
CHD9-218ENST00000566029 DPPA3Q6W0C5 159 aa2.56□□□□□ -2
CHD9-218ENST00000566029 TMEM182Q6ZP80 229 aaPredicted RBP2.56□□□□□ -2
CHD9-218ENST00000566029 RTN4RL1Q86UN2 441 aaPredicted RBP2.56□□□□□ -2
CHD9-218ENST00000566029 TMEM37Q8WXS4 190 aa2.56□□□□□ -2
CHD9-218ENST00000566029 RARRES2Q99969 163 aa2.56□□□□□ -2
CHD9-218ENST00000566029 SCNM1Q9BWG6 230 aa2.56□□□□□ -2
CHD9-218ENST00000566029 V9GYY9 64 aa2.56□□□□□ -2
CHD9-218ENST00000566029 FITM1A5D6W6 292 aa2.55□□□□□ -2
CHD9-218ENST00000566029 TSPAN13O95857 204 aa2.55□□□□□ -2
CHD9-218ENST00000566029 CD38P28907 300 aa2.55□□□□□ -2
CHD9-218ENST00000566029 RBMXP38159 391 aaKnown RBP2.55□□□□□ -2
CHD9-218ENST00000566029 PDLIM4P50479 330 aa2.55□□□□□ -2
CHD9-218ENST00000566029 TAF10Q12962 218 aa2.55□□□□□ -2
CHD9-218ENST00000566029 MIDNQ504T8 468 aa2.55□□□□□ -2
CHD9-218ENST00000566029 FBLN7Q53RD9 439 aa2.55□□□□□ -2
CHD9-218ENST00000566029 CST9Q5W186 159 aa2.55□□□□□ -2
CHD9-218ENST00000566029 FBXW12Q6X9E4 464 aa2.55□□□□□ -2
CHD9-218ENST00000566029 OR5D18Q8NGL1 313 aa2.55□□□□□ -2
CHD9-218ENST00000566029 PIGTQ969N2 578 aa2.55□□□□□ -2
CHD9-218ENST00000566029 RPUSD4Q96CM3 377 aaKnown RBP2.55□□□□□ -2
CHD9-218ENST00000566029 DAZAP1Q96EP5 407 aaKnown RBP2.55□□□□□ -2
CHD9-218ENST00000566029 C20orf173Q96LM9 149 aa2.55□□□□□ -2
CHD9-218ENST00000566029 IMMP2LQ96T52 175 aa2.55□□□□□ -2
CHD9-218ENST00000566029 DERL1Q9BUN8 251 aa2.55□□□□□ -2
CHD9-218ENST00000566029 GP6Q9HCN6 339 aa2.55□□□□□ -2
CHD9-218ENST00000566029 ELOVL5Q9NYP7 299 aa2.55□□□□□ -2
CHD9-218ENST00000566029 PADI3Q9ULW8 664 aa2.55□□□□□ -2
CHD9-218ENST00000566029 RCL1Q9Y2P8 373 aaKnown RBP2.55□□□□□ -2
CHD9-218ENST00000566029 TRPM6Q9BX84 2022 aa2.55□□□□□ -2
CHD9-218ENST00000566029 LOC102723996A0A087X1L8 192 aa2.55□□□□□ -2
CHD9-218ENST00000566029 DIRC3C9JPN6 131 aa2.55□□□□□ -2
CHD9-218ENST00000566029 C17orf112F2Z3M2 114 aa2.55□□□□□ -2
CHD9-218ENST00000566029 ST8SIA3O43173 380 aa2.55□□□□□ -2
CHD9-218ENST00000566029 TNFP01375 233 aa2.55□□□□□ -2
CHD9-218ENST00000566029 MYF5P13349 255 aa2.55□□□□□ -2
CHD9-218ENST00000566029 FAM71F2Q6NXP2 309 aa2.55□□□□□ -2
CHD9-218ENST00000566029 BRICD5Q6PL45 260 aa2.55□□□□□ -2
CHD9-218ENST00000566029 SCGB1D4Q6XE38 83 aa2.55□□□□□ -2
CHD9-218ENST00000566029 TRAPPC6BQ86SZ2 158 aa2.55□□□□□ -2
CHD9-218ENST00000566029 ZPLD1Q8TCW7 415 aa2.55□□□□□ -2
CHD9-218ENST00000566029 SUSD3Q96L08 255 aa2.55□□□□□ -2
CHD9-218ENST00000566029 RSG1Q9BU20 258 aa2.55□□□□□ -2
CHD9-218ENST00000566029 SLC46A2Q9BY10 475 aa2.55□□□□□ -2
CHD9-218ENST00000566029 TMEM126AQ9H061 195 aa2.55□□□□□ -2
CHD9-218ENST00000566029 CLDND1Q9NY35 253 aa2.55□□□□□ -2
CHD9-218ENST00000566029 RNF115Q9Y4L5 304 aa2.55□□□□□ -2
CHD9-218ENST00000566029 ARID2Q68CP9 1835 aa2.55□□□□□ -2
CHD9-218ENST00000566029 TANC2Q9HCD6 1990 aa2.55□□□□□ -2
CHD9-218ENST00000566029 A6NDN8 102 aa2.55□□□□□ -2
CHD9-218ENST00000566029 ZNF814B7Z6K7 855 aa2.55□□□□□ -2
CHD9-218ENST00000566029 CORTO00230 105 aa2.55□□□□□ -2
CHD9-218ENST00000566029 BRS3P32247 399 aa2.55□□□□□ -2
CHD9-218ENST00000566029 LHX2P50458 406 aa2.55□□□□□ -2
CHD9-218ENST00000566029 DAP3P51398 398 aaKnown RBP2.55□□□□□ -2
CHD9-218ENST00000566029 TRMT12Q53H54 448 aaKnown RBP2.55□□□□□ -2
CHD9-218ENST00000566029 ABHD17BQ5VST6 288 aa2.55□□□□□ -2
CHD9-218ENST00000566029 OR2M7Q8NG81 312 aa2.55□□□□□ -2
CHD9-218ENST00000566029 OR2G3Q8NGZ4 309 aa2.55□□□□□ -2
CHD9-218ENST00000566029 MARCH1Q8TCQ1 289 aa2.55□□□□□ -2
CHD9-218ENST00000566029 DTD2Q96FN9 168 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms