RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 OCEL1Q9H607 264 aa21.29■■□□□ 1
NME3-208ENST00000565379 METTL8Q9H825 291 aaKnown RBP21.29■■□□□ 1
NME3-208ENST00000565379 TRAPPC2LQ9UL33 140 aa21.29■■□□□ 1
NME3-208ENST00000565379 MGAT4AQ9UM21 535 aa21.29■■□□□ 1
NME3-208ENST00000565379 A3GALT2U3KPV4 340 aa21.29■■□□□ 1
NME3-208ENST00000565379 TENM1Q9UKZ4 2725 aa21.29■■□□□ 1
NME3-208ENST00000565379 TRBV6-6A0A0A6YYG2 114 aa21.28■■□□□ 1
NME3-208ENST00000565379 C17orf98A8MV24 154 aa21.28■■□□□ 1
NME3-208ENST00000565379 XRCC3O43542 346 aa21.28■■□□□ 1
NME3-208ENST00000565379 TOX4O94842 621 aa21.28■■□□□ 1
NME3-208ENST00000565379 PNLIPRP3Q17RR3 467 aa21.28■■□□□ 1
NME3-208ENST00000565379 C6orf183Q5T699 404 aa21.28■■□□□ 1
NME3-208ENST00000565379 CMSS1Q9BQ75 279 aaKnown RBP21.28■■□□□ 1
NME3-208ENST00000565379 SIRPDQ9H106 197 aa21.28■■□□□ 1
NME3-208ENST00000565379 UNKLQ9H9P5 680 aaKnown RBP21.28■■□□□ 1
NME3-208ENST00000565379 C12orf4Q9NQ89 552 aa21.28■■□□□ 1
NME3-208ENST00000565379 AK3Q9UIJ7 227 aa21.28■■□□□ 1
NME3-208ENST00000565379 ORC5O43913 435 aa21.27■■□□□ 1
NME3-208ENST00000565379 CD3GP09693 182 aa21.27■■□□□ 1
NME3-208ENST00000565379 GNB3P16520 340 aa21.27■■□□□ 1
NME3-208ENST00000565379 CDK2P24941 298 aa21.27■■□□□ 1
NME3-208ENST00000565379 GLP1RP43220 463 aa21.27■■□□□ 1
NME3-208ENST00000565379 PITPNAQ00169 270 aa21.27■■□□□ 1
NME3-208ENST00000565379 CDNFQ49AH0 187 aa21.27■■□□□ 1
NME3-208ENST00000565379 MOB1BQ7L9L4 216 aa21.27■■□□□ 1
NME3-208ENST00000565379 TCF23Q7RTU1 214 aa21.27■■□□□ 1
NME3-208ENST00000565379 UPRTQ96BW1 309 aa21.27■■□□□ 1
NME3-208ENST00000565379 DCUN1D5Q9BTE7 237 aa21.27■■□□□ 1
NME3-208ENST00000565379 NXF2Q9GZY0 626 aaKnown RBP21.27■■□□□ 1
NME3-208ENST00000565379 CHMP1AQ9HD42 196 aaPredicted RBP21.27■■□□□ 1
NME3-208ENST00000565379 HPGDSO60760 199 aa21.26■□□□□ 0.99
NME3-208ENST00000565379 TPPPO94811 219 aa21.26■□□□□ 0.99
NME3-208ENST00000565379 NAPSAO96009 420 aa21.26■□□□□ 0.99
NME3-208ENST00000565379 MMP9P14780 707 aa21.26■□□□□ 0.99
NME3-208ENST00000565379 DLX6P56179 175 aa21.26■□□□□ 0.99
NME3-208ENST00000565379 ZNF260Q3ZCT1 412 aa21.26■□□□□ 0.99
NME3-208ENST00000565379 TMEM69Q5SWH9 247 aa21.26■□□□□ 0.99
NME3-208ENST00000565379 FOXB2Q5VYV0 432 aa21.26■□□□□ 0.99
NME3-208ENST00000565379 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP21.26■□□□□ 0.99
NME3-208ENST00000565379 MCFD2Q8NI22 146 aa21.26■□□□□ 0.99
NME3-208ENST00000565379 MRPL30Q8TCC3 161 aaKnown RBP21.26■□□□□ 0.99
NME3-208ENST00000565379 DYRK2Q92630 601 aa21.26■□□□□ 0.99
NME3-208ENST00000565379 MMP27Q9H306 513 aa21.26■□□□□ 0.99
NME3-208ENST00000565379 LINC00574Q9H8X3 128 aa21.26■□□□□ 0.99
NME3-208ENST00000565379 MBNL3Q9NUK0 354 aaKnown RBP21.26■□□□□ 0.99
NME3-208ENST00000565379 KCNIP1Q9NZI2 227 aa21.26■□□□□ 0.99
NME3-208ENST00000565379 KCNK7Q9Y2U2 307 aa21.26■□□□□ 0.99
NME3-208ENST00000565379 TRAV18A0A075B6X5 111 aa21.25■□□□□ 0.99
NME3-208ENST00000565379 KBTBD11-OT1A0A1B0GTJ5 212 aa21.25■□□□□ 0.99
NME3-208ENST00000565379 RGS5O15539 181 aa21.25■□□□□ 0.99
NME3-208ENST00000565379 EIF4EP06730 217 aaKnown RBP21.25■□□□□ 0.99
NME3-208ENST00000565379 CGB3P0DN86 165 aa21.25■□□□□ 0.99
NME3-208ENST00000565379 CGB7P0DN87 165 aa21.25■□□□□ 0.99
NME3-208ENST00000565379 CCL3L1P16619 93 aa21.25■□□□□ 0.99
NME3-208ENST00000565379 PRTN3P24158 256 aa21.25■□□□□ 0.99
NME3-208ENST00000565379 MNDAP41218 407 aa21.25■□□□□ 0.99
NME3-208ENST00000565379 ERVFRD-1P60508 538 aa21.25■□□□□ 0.99
NME3-208ENST00000565379 ARFRP1Q13795 201 aa21.25■□□□□ 0.99
NME3-208ENST00000565379 HACD4Q5VWC8 232 aa21.25■□□□□ 0.99
NME3-208ENST00000565379 NCR3LG1Q68D85 454 aa21.25■□□□□ 0.99
NME3-208ENST00000565379 OR10A7Q8NGE5 316 aa21.25■□□□□ 0.99
NME3-208ENST00000565379 OR13A1Q8NGR1 328 aa21.25■□□□□ 0.99
NME3-208ENST00000565379 FAM25AB3EWG3 89 aa21.24■□□□□ 0.99
NME3-208ENST00000565379 FAM25CB3EWG5 89 aa21.24■□□□□ 0.99
NME3-208ENST00000565379 FAM25GB3EWG6 89 aa21.24■□□□□ 0.99
NME3-208ENST00000565379 MELTFP08582 738 aa21.24■□□□□ 0.99
NME3-208ENST00000565379 ELK1P19419 428 aa21.24■□□□□ 0.99
NME3-208ENST00000565379 TALDO1P37837 337 aa21.24■□□□□ 0.99
NME3-208ENST00000565379 TMEM30BQ3MIR4 351 aa21.24■□□□□ 0.99
NME3-208ENST00000565379 OR52W1Q6IF63 320 aa21.24■□□□□ 0.99
NME3-208ENST00000565379 HEPN1Q6WQI6 88 aa21.24■□□□□ 0.99
NME3-208ENST00000565379 Q8N7P7 452 aa21.24■□□□□ 0.99
NME3-208ENST00000565379 OR4K15Q8NH41 348 aa21.24■□□□□ 0.99
NME3-208ENST00000565379 MRGPRDQ8TDS7 321 aa21.24■□□□□ 0.99
NME3-208ENST00000565379 C15orf40Q8WUR7 153 aa21.24■□□□□ 0.99
NME3-208ENST00000565379 CCDC107Q8WV48 283 aa21.24■□□□□ 0.99
NME3-208ENST00000565379 PCGF1Q9BSM1 259 aa21.24■□□□□ 0.99
NME3-208ENST00000565379 C6orf62Q9GZU0 229 aaPredicted RBP21.24■□□□□ 0.99
NME3-208ENST00000565379 RABL2AQ9UBK7 228 aaPredicted RBP21.24■□□□□ 0.99
NME3-208ENST00000565379 RABL2BQ9UNT1 228 aa21.24■□□□□ 0.99
NME3-208ENST00000565379 CLPXO76031 633 aa21.23■□□□□ 0.99
NME3-208ENST00000565379 EPHA1P21709 976 aa21.23■□□□□ 0.99
NME3-208ENST00000565379 ZNF880Q6PDB4 577 aa21.23■□□□□ 0.99
NME3-208ENST00000565379 VMO1Q7Z5L0 202 aa21.23■□□□□ 0.99
NME3-208ENST00000565379 C11orf42Q8N5U0 333 aa21.23■□□□□ 0.99
NME3-208ENST00000565379 NANPQ8TBE9 248 aa21.23■□□□□ 0.99
NME3-208ENST00000565379 TBX15Q96SF7 602 aa21.23■□□□□ 0.99
NME3-208ENST00000565379 HEXA-AS1Q9H8Q6 139 aa21.23■□□□□ 0.99
NME3-208ENST00000565379 ZMAT3Q9HA38 289 aaKnown RBP21.23■□□□□ 0.99
NME3-208ENST00000565379 CALYQ9NYX4 217 aa21.23■□□□□ 0.99
NME3-208ENST00000565379 NPIPB11E5RHQ5 1161 aa21.22■□□□□ 0.99
NME3-208ENST00000565379 SPINT2O43291 252 aa21.22■□□□□ 0.99
NME3-208ENST00000565379 IGHV1-8P0DP01 117 aa21.22■□□□□ 0.99
NME3-208ENST00000565379 GNG2P59768 71 aa21.22■□□□□ 0.99
NME3-208ENST00000565379 BPIFB3P59826 476 aa21.22■□□□□ 0.99
NME3-208ENST00000565379 GUCA2AQ02747 115 aa21.22■□□□□ 0.99
NME3-208ENST00000565379 SRSF7Q16629 238 aaKnown RBP eCLIP21.22■□□□□ 0.99
NME3-208ENST00000565379 C17orf58Q2M2W7 97 aa21.22■□□□□ 0.99
NME3-208ENST00000565379 AUNIPQ9H7T9 357 aa21.22■□□□□ 0.99
NME3-208ENST00000565379 SESN1Q9Y6P5 492 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms