RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 FCGR2CP31995 323 aa18.29■□□□□ 0.52
LINC01960-201ENST00000563759 MRPS11P82912 194 aaKnown RBP18.29■□□□□ 0.52
LINC01960-201ENST00000563759 HERPUD1Q15011 391 aa18.29■□□□□ 0.52
LINC01960-201ENST00000563759 MARCH1Q8TCQ1 289 aa18.29■□□□□ 0.52
LINC01960-201ENST00000563759 MED30Q96HR3 178 aa18.29■□□□□ 0.52
LINC01960-201ENST00000563759 TMPRSS13Q9BYE2 586 aa18.29■□□□□ 0.52
LINC01960-201ENST00000563759 PLEKHF2Q9H8W4 249 aa18.29■□□□□ 0.52
LINC01960-201ENST00000563759 TAF9BQ9HBM6 251 aa18.29■□□□□ 0.52
LINC01960-201ENST00000563759 CRYBG3Q68DQ2 2970 aa18.28■□□□□ 0.52
LINC01960-201ENST00000563759 TENM4Q6N022 2769 aa18.28■□□□□ 0.52
LINC01960-201ENST00000563759 USP9YO00507 2555 aaPredicted RBP18.28■□□□□ 0.52
LINC01960-201ENST00000563759 P2RX3P56373 397 aa18.28■□□□□ 0.52
LINC01960-201ENST00000563759 C6orf183Q5T699 404 aa18.28■□□□□ 0.52
LINC01960-201ENST00000563759 AADACL3Q5VUY0 350 aa18.28■□□□□ 0.52
LINC01960-201ENST00000563759 ZDHHC22Q8N966 263 aa18.28■□□□□ 0.52
LINC01960-201ENST00000563759 MRGPRDQ8TDS7 321 aa18.28■□□□□ 0.52
LINC01960-201ENST00000563759 VSIG4Q9Y279 399 aa18.28■□□□□ 0.52
LINC01960-201ENST00000563759 ODAMA1E959 279 aa18.27■□□□□ 0.52
LINC01960-201ENST00000563759 ADAM20O43506 726 aa18.27■□□□□ 0.52
LINC01960-201ENST00000563759 PRAF2O60831 178 aa18.27■□□□□ 0.52
LINC01960-201ENST00000563759 PFDN1O60925 122 aa18.27■□□□□ 0.52
LINC01960-201ENST00000563759 HMGN3Q15651 99 aa18.27■□□□□ 0.52
LINC01960-201ENST00000563759 ZNF660Q6AZW8 331 aaPredicted RBP18.27■□□□□ 0.52
LINC01960-201ENST00000563759 TMEM246Q9BRR3 403 aa18.27■□□□□ 0.52
LINC01960-201ENST00000563759 OR5H14A6NHG9 310 aa18.26■□□□□ 0.51
LINC01960-201ENST00000563759 NFYAP23511 347 aaPredicted RBP18.26■□□□□ 0.51
LINC01960-201ENST00000563759 CBX3Q13185 183 aa18.26■□□□□ 0.51
LINC01960-201ENST00000563759 DHRS11Q6UWP2 260 aa18.26■□□□□ 0.51
LINC01960-201ENST00000563759 OR13A1Q8NGR1 328 aa18.26■□□□□ 0.51
LINC01960-201ENST00000563759 UBALD1Q8TB05 177 aa18.26■□□□□ 0.51
LINC01960-201ENST00000563759 CABLES2Q9BTV7 478 aa18.26■□□□□ 0.51
LINC01960-201ENST00000563759 LIME1Q9H400 295 aa18.26■□□□□ 0.51
LINC01960-201ENST00000563759 SLC25A10Q9UBX3 287 aaPredicted RBP18.26■□□□□ 0.51
LINC01960-201ENST00000563759 PCDHB10Q9UN67 800 aa18.26■□□□□ 0.51
LINC01960-201ENST00000563759 YLPM1P49750 1951 aaKnown RBP18.26■□□□□ 0.51
LINC01960-201ENST00000563759 DOPEY2Q9Y3R5 2298 aa18.26■□□□□ 0.51
LINC01960-201ENST00000563759 A0A0A6YYJ9 748 aa18.26■□□□□ 0.51
LINC01960-201ENST00000563759 IGKV1-6A0A0C4DH72 117 aa18.26■□□□□ 0.51
LINC01960-201ENST00000563759 MEX3AA1L020 520 aaKnown RBP18.26■□□□□ 0.51
LINC01960-201ENST00000563759 NDUFA2O43678 99 aa18.26■□□□□ 0.51
LINC01960-201ENST00000563759 NDUFB7P17568 137 aa18.26■□□□□ 0.51
LINC01960-201ENST00000563759 FPR2P25090 351 aa18.26■□□□□ 0.51
LINC01960-201ENST00000563759 ECI1P42126 302 aa18.26■□□□□ 0.51
LINC01960-201ENST00000563759 MECP2P51608 486 aaKnown RBP18.26■□□□□ 0.51
LINC01960-201ENST00000563759 FXYD4P59646 89 aa18.26■□□□□ 0.51
LINC01960-201ENST00000563759 HERV-K104P61576 105 aa18.26■□□□□ 0.51
LINC01960-201ENST00000563759 BAMBIQ13145 260 aa18.26■□□□□ 0.51
LINC01960-201ENST00000563759 TRAT1Q6PIZ9 186 aa18.26■□□□□ 0.51
LINC01960-201ENST00000563759 OR10J5Q8NHC4 309 aa18.26■□□□□ 0.51
LINC01960-201ENST00000563759 TIMD4Q96H15 378 aa18.26■□□□□ 0.51
LINC01960-201ENST00000563759 SCGB3A2Q96PL1 93 aa18.26■□□□□ 0.51
LINC01960-201ENST00000563759 CCL19Q99731 98 aa18.26■□□□□ 0.51
LINC01960-201ENST00000563759 SLC23A1Q9UHI7 598 aa18.26■□□□□ 0.51
LINC01960-201ENST00000563759 C12orf77C9JDV5 145 aa18.25■□□□□ 0.51
LINC01960-201ENST00000563759 PGAM2P15259 253 aa18.25■□□□□ 0.51
LINC01960-201ENST00000563759 TOMM40LQ969M1 308 aa18.25■□□□□ 0.51
LINC01960-201ENST00000563759 CHODLQ9H9P2 273 aa18.25■□□□□ 0.51
LINC01960-201ENST00000563759 C7orf66A4D0T2 115 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 PPIHO43447 177 aaKnown RBP18.24■□□□□ 0.51
LINC01960-201ENST00000563759 DIRAS3O95661 229 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 IGHV2-70P01814 119 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 ERP29P30040 261 aaKnown RBP18.24■□□□□ 0.51
LINC01960-201ENST00000563759 SSTR5P35346 364 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 EFNA4P52798 201 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 SURF2Q15527 256 aaPredicted RBP18.24■□□□□ 0.51
LINC01960-201ENST00000563759 AVPI1Q5T686 147 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 METTL11BQ5VVY1 283 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 LYPD2Q6UXB3 125 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 MUC20Q8N307 709 aaPredicted RBP18.24■□□□□ 0.51
LINC01960-201ENST00000563759 ZNF565Q8N9K5 539 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 DCTN5Q9BTE1 182 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 OR6C3Q9NZP0 311 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 CEACAM18A8MTB9 384 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 HSPA12AO43301 675 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 NDUFB3O43676 98 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 NDUFS7O75251 213 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 FSTL3O95633 263 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 F12P00748 615 aaPredicted RBP18.24■□□□□ 0.51
LINC01960-201ENST00000563759 PPYP01298 95 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 AADACP22760 399 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 IL2RGP31785 369 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 C4orf46Q504U0 113 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 LRRC10Q5BKY1 277 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 GLDNQ6ZMI3 551 aaPredicted RBP18.24■□□□□ 0.51
LINC01960-201ENST00000563759 RAB1CQ92928 201 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 GALMQ96C23 342 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 C14orf79Q96F83 325 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 LURAP1Q96LR2 239 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 SEC22CQ9BRL7 303 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 GPN1Q9HCN4 374 aaPredicted RBP18.24■□□□□ 0.51
LINC01960-201ENST00000563759 KAAG1Q9UBP8 84 aa18.24■□□□□ 0.51
LINC01960-201ENST00000563759 TRBV6-7A0A0A0MS04 114 aa18.23■□□□□ 0.51
LINC01960-201ENST00000563759 OVOL3O00110 214 aa18.23■□□□□ 0.51
LINC01960-201ENST00000563759 HBZP02008 142 aa18.23■□□□□ 0.51
LINC01960-201ENST00000563759 VSIG10L2P0DP72 767 aa18.23■□□□□ 0.51
LINC01960-201ENST00000563759 ZNF554Q86TJ5 538 aa18.23■□□□□ 0.51
LINC01960-201ENST00000563759 FGFRL1Q8N441 504 aa18.23■□□□□ 0.51
LINC01960-201ENST00000563759 OR1L1Q8NH94 360 aa18.23■□□□□ 0.51
LINC01960-201ENST00000563759 CAPSLQ8WWF8 208 aa18.23■□□□□ 0.51
LINC01960-201ENST00000563759 MOB3AQ96BX8 217 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms