RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 PPP1R35Q8TAP8 253 aa9.05□□□□□ -0.96
RNF40-204ENST00000563683 NIPSNAP3BQ9BS92 247 aa9.05□□□□□ -0.96
RNF40-204ENST00000563683 POLDIP2Q9Y2S7 368 aa9.05□□□□□ -0.96
RNF40-204ENST00000563683 IGLV3-12A0A075B6K2 115 aa9.05□□□□□ -0.96
RNF40-204ENST00000563683 BCL3P20749 454 aa9.05□□□□□ -0.96
RNF40-204ENST00000563683 SPEM2Q0P670 501 aa9.05□□□□□ -0.96
RNF40-204ENST00000563683 CATR1Q13166 79 aa9.05□□□□□ -0.96
RNF40-204ENST00000563683 GAMTQ14353 236 aa9.05□□□□□ -0.96
RNF40-204ENST00000563683 USF2Q15853 346 aaPredicted RBP9.05□□□□□ -0.96
RNF40-204ENST00000563683 HIKESHIQ53FT3 197 aa9.05□□□□□ -0.96
RNF40-204ENST00000563683 OR5C1Q8NGR4 320 aa9.05□□□□□ -0.96
RNF40-204ENST00000563683 FZR1Q9UM11 496 aa9.05□□□□□ -0.96
RNF40-204ENST00000563683 TMEM265A0A087WTH1 108 aa9.05□□□□□ -0.96
RNF40-204ENST00000563683 RPS2P15880 293 aaKnown RBP9.05□□□□□ -0.96
RNF40-204ENST00000563683 BTF3P20290 206 aaKnown RBP9.05□□□□□ -0.96
RNF40-204ENST00000563683 PHYHD1Q5SRE7 291 aa9.05□□□□□ -0.96
RNF40-204ENST00000563683 FAM58AQ8N1B3 248 aa9.05□□□□□ -0.96
RNF40-204ENST00000563683 RFESDQ8TAC1 157 aa9.05□□□□□ -0.96
RNF40-204ENST00000563683 A0A0U1RQK1 487 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 H3BQ15 152 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 SH2D1BO14796 132 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 ZIC3O60481 467 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 KRASP01116 189 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 NDUFB7P17568 137 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 ERVK-16P61578 105 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 FOXO1Q12778 655 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 ENDOGQ14249 297 aaKnown RBP9.04□□□□□ -0.96
RNF40-204ENST00000563683 RTN4RL2Q86UN3 420 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 HIST3H2BBQ8N257 126 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 OR2C3Q8N628 320 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 ERGIC1Q969X5 290 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 OR5B12Q96R08 314 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 RBFOX3A6NFN3 312 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 HIST1H2BKO60814 126 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 HIST1H2BJP06899 126 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 HIST1H2BOP23527 126 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 HIST1H2BBP33778 126 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 HIST1H2BDP58876 126 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 HIST1H2BCP62807 126 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 HIST2H2BEQ16778 126 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.04□□□□□ -0.96
RNF40-204ENST00000563683 LIAT1Q6ZQX7 453 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 TBC1D26Q86UD7 250 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 OR10AD1Q8NGE0 317 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 HIST1H2BHQ93079 126 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 C10orf35Q96D05 121 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 HIST1H2BNQ99877 126 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 HIST1H2BMQ99879 126 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 GPR61Q9BZJ8 451 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 SPTAN1Q13813 2472 aaKnown RBP9.04□□□□□ -0.96
RNF40-204ENST00000563683 KIAA2026Q5HYC2 2103 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 A0A0G2JMM0 328 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 A0A1W2PPB8 328 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 A0A1W2PRS3 328 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 KIR3DP1A8MWS1 328 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 RPL36A-HNRNPH2H7BZ11 118 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 K7ESF4 209 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 CYB5BO43169 146 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 TLE1Q04724 770 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 ALKBH6Q3KRA9 238 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 KHDC3LQ587J8 217 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 GAPTQ8N292 157 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 DEFB108BQ8NET1 73 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 OR8G5Q8NG78 346 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 OR2M7Q8NG81 312 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 OR5R1Q8NH85 324 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 RAB39BQ96DA2 213 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 TVP23CQ96ET8 276 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 CCL28Q9NRJ3 127 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 GPR27Q9NS67 375 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 FER1L5A0AVI2 2057 aa9.04□□□□□ -0.96
RNF40-204ENST00000563683 CHD7Q9P2D1 2997 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 IGKV1-9A0A0C4DH69 117 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 MPPED1O15442 326 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 DFFBO76075 338 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 HBE1P02100 147 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 FABP4P15090 132 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 NHLH2Q02577 135 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 BAXQ07812 192 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 ELOBQ15370 118 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 ZNF766Q5HY98 468 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 HES3Q5TGS1 186 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 MRPL14Q6P1L8 145 aaKnown RBP9.03□□□□□ -0.96
RNF40-204ENST00000563683 CLDN23Q96B33 292 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 NTNG2Q96CW9 530 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 TECTBQ96PL2 329 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 ZDHHC8Q9ULC8 765 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 TP53TG5Q9Y2B4 290 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 RNF212BA8MTL3 300 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 CDRT15L2A8MXV6 281 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 TCAPO15273 167 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 C1QL1O75973 258 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 IRF2P14316 349 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 PTGER4P35408 488 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 NPBWR2P48146 333 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 FHITP49789 147 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 DCAF10Q5QP82 559 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 CDPF1Q6NVV7 123 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 SPNS3Q6ZMD2 512 aa9.03□□□□□ -0.96
RNF40-204ENST00000563683 RAB24Q969Q5 203 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms