RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 SNX22Q96L94 193 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 ZNF665Q9H7R5 613 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 GAB2Q9UQC2 676 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 HS3ST3B1Q9Y662 390 aa10.19□□□□□ -0.78
ABCA3-203ENST00000563623 A0A1W2PQM1 296 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 PROB1E7EW31 1015 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 TRAPPC2LH3BP13 241 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 TCF21O43680 179 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 LIFP15018 202 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 TESK1Q15569 626 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 MKXQ8IYA7 352 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 SELENOHQ8IZQ5 122 aaKnown RBP10.18□□□□□ -0.78
ABCA3-203ENST00000563623 CADM4Q8NFZ8 388 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 C10orf35Q96D05 121 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 MRPS17Q9Y2R5 130 aaKnown RBP10.18□□□□□ -0.78
ABCA3-203ENST00000563623 CACNA1EQ15878 2313 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 IGLV3-12A0A075B6K2 115 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 IGKV1D-13A0A0B4J2D9 117 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 IGHV5-10-1A0A0J9YXX1 117 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 IGKV1-13P0DP09 117 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 SRFP11831 508 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 FKBP2P26885 142 aaKnown RBP10.18□□□□□ -0.78
ABCA3-203ENST00000563623 ICAM4Q14773 271 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 SPSB3Q6PJ21 355 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 MYPOPQ86VE0 399 aaPredicted RBP10.18□□□□□ -0.78
ABCA3-203ENST00000563623 C1orf87Q8N0U7 546 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 ZIC4Q8N9L1 334 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 ZNF488Q96MN9 340 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 TMEM38BQ9NVV0 291 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 CD300LBA8K4G0 201 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 RPS16P62249 146 aaKnown RBP10.18□□□□□ -0.78
ABCA3-203ENST00000563623 ELOBQ15370 118 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 CABLES2Q9BTV7 478 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 PPP1R3CQ9UQK1 317 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 FREM1Q5H8C1 2179 aa10.18□□□□□ -0.78
ABCA3-203ENST00000563623 ARHGAP21Q5T5U3 1957 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 SYNGR3O43761 229 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 ZIC3O60481 467 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 RBMXL2O75526 392 aaKnown RBP10.17□□□□□ -0.78
ABCA3-203ENST00000563623 OR8G2PQ6IF36 304 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 FADS6Q8N9I5 356 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 OR10J5Q8NHC4 309 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 PRRG4Q9BZD6 226 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 LYRM2Q9NU23 88 aaPredicted RBP10.17□□□□□ -0.78
ABCA3-203ENST00000563623 GJE1A6NN92 205 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 TGOLN2O43493 480 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 HIST1H2BKO60814 126 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 HIST1H2BJP06899 126 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 HIST1H1BP16401 226 aaKnown RBP10.17□□□□□ -0.78
ABCA3-203ENST00000563623 HIST1H2BOP23527 126 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 HIST1H2BBP33778 126 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 HIST1H2BDP58876 126 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 HIST1H2BCP62807 126 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 RAC1P63000 192 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 HIST2H2BEQ16778 126 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 SPANXN5Q5MJ07 72 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.17□□□□□ -0.78
ABCA3-203ENST00000563623 TMEM211Q6ICI0 200 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 LRP11Q86VZ4 500 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 PSMF1Q92530 271 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 HIST1H2BHQ93079 126 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 HIST1H2BNQ99877 126 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 HIST1H2BMQ99879 126 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 C2orf88Q9BSF0 95 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 OR2H1Q9GZK4 316 aa10.17□□□□□ -0.78
ABCA3-203ENST00000563623 ERRFI1Q9UJM3 462 aaPredicted RBP10.17□□□□□ -0.78
ABCA3-203ENST00000563623 IGLV3-32A0A0A0MS00 114 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 C5orf49A4QMS7 147 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 ZNF732B4DXR9 585 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 SEC14L6B5MCN3 397 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 TMEM50AO95807 157 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 TRGC1P0CF51 173 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 PGA5P0DJD9 388 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 VDAC1P21796 283 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 GDF1P27539 372 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 STARD6P59095 220 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 H3F3AP84243 136 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 LRTM2Q8N967 370 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 OR1K1Q8NGR3 316 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 ABHD3Q8WU67 409 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 RPUSD4Q96CM3 377 aaKnown RBP10.16□□□□□ -0.78
ABCA3-203ENST00000563623 OR6C6A6NF89 314 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 ETV2O00321 342 aaPredicted RBP10.16□□□□□ -0.78
ABCA3-203ENST00000563623 IGLV3-1P01715 115 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 OTX1P32242 354 aaPredicted RBP10.16□□□□□ -0.78
ABCA3-203ENST00000563623 FOXO1Q12778 655 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 ZNF705AQ6ZN79 300 aaPredicted RBP10.16□□□□□ -0.78
ABCA3-203ENST00000563623 RBMXL1Q96E39 390 aaKnown RBP10.16□□□□□ -0.78
ABCA3-203ENST00000563623 HS3ST6Q96QI5 342 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 DOCK11Q5JSL3 2073 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 CRYGSP22914 178 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 PCBD1P61457 104 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 PRDX4Q13162 271 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 HLA-BQ31612 363 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 KHDC3LQ587J8 217 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 FAM185AQ8N0U4 392 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 FRZBQ92765 325 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 ATP5SQ99766 215 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 ZNF576Q9H609 170 aa10.16□□□□□ -0.78
ABCA3-203ENST00000563623 CALHM2Q9HA72 323 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms